Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00188
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 131 5e-31
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 30 2.2
L25599-3|ABN43087.1| 570|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z77135-2|CAB00879.1| 769|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical pr... 28 8.7
AC006610-1|AAK85447.4| 360|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical
protein F56F3.5 protein.
Length = 257
Score = 131 bits (317), Expect = 5e-31
Identities = 63/85 (74%), Positives = 73/85 (85%)
Frame = +1
Query: 1 KGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 180
KG KKK VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQGTKIASEGLKGRVFEVSL DL
Sbjct: 13 KGGKKKAVDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL 72
Query: 181 QADTDAERSFRKFRLIAEYVQGRNV 255
++E FRKF+LIAE VQG+NV
Sbjct: 73 ---NNSEADFRKFKLIAEDVQGKNV 94
Score = 92.7 bits (220), Expect = 3e-19
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +3
Query: 255 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 434
L NFH M +T DKL +VKKW TLIEAN VKTTDGY LRVF I FT K +KT Y
Sbjct: 95 LTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYT 154
Query: 435 QHTQVRAIRKKMCEIITRDVTNSEL 509
+ +++R IR +M I ++VT +L
Sbjct: 155 KTSKIRKIRSEMIGCIEKEVTGCDL 179
Score = 64.9 bits (151), Expect = 6e-11
Identities = 28/40 (70%), Positives = 35/40 (87%)
Frame = +2
Query: 509 REVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 628
+EVV+KLIPDSI KDIEK C +YPL++V IRKVK++KRP
Sbjct: 180 KEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRP 219
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Frame = -2
Query: 470 HFLSDCSDLSVLGVARLALAQGVLIGETNAEDT*NVSIGCLHINVGFDESLPFFNHPP-- 297
H+L+ S + + AR L +G + + + + C H NV + L F P
Sbjct: 33 HYLAASSSTTSVDAARTLLERGANVNAIDRDGATPLHYACTHDNVAMAQLLLTFGADPMS 92
Query: 296 -ELIGCEVHAVEVAETLRPC-TYSAINLNLRKDLSASVSACRSARET 162
+ +G +++ TLR Y + R AC S ET
Sbjct: 93 ADKLGRTAYSIAKGNTLRFLRRYKKSSNRQRLGFFRRFFACHSRNET 139
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Frame = -2
Query: 470 HFLSDCSDLSVLGVARLALAQGVLIGETNAEDT*NVSIGCLHINVGFDESLPFFNHPP-- 297
H+L+ S + + AR L +G + + + + C H NV + L F P
Sbjct: 33 HYLAASSSTTSVDAARTLLERGANVNAIDRDGATPLHYACTHDNVAMAQLLLTFGADPMS 92
Query: 296 -ELIGCEVHAVEVAETLRPC-TYSAINLNLRKDLSASVSACRSARET 162
+ +G +++ TLR Y + R AC S ET
Sbjct: 93 ADKLGRTAYSIAKGNTLRFLRRYKKSSNRQRLGFFRRFFACHSRNET 139
>L25599-3|ABN43087.1| 570|Caenorhabditis elegans Hypothetical
protein F54H12.8 protein.
Length = 570
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = -2
Query: 635 SKRASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSPPP-*FRVSDVACNDFTHFLS 459
S ASST S + R +P+ PWQ Q S +PPP V D C +
Sbjct: 101 SLTASSTTSDPSIPNPTRKRITRQPNYPPWQPHQPSNPNPPPFSMNVPDFHCFIDEKMRA 160
Query: 458 DCSDLSVLGV 429
+ V+GV
Sbjct: 161 EVEIFHVIGV 170
>Z77135-2|CAB00879.1| 769|Caenorhabditis elegans Hypothetical
protein T16A9.4 protein.
Length = 769
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -1
Query: 753 YLIKHSLEREARSLRPFRLVSGF-PFASTAFAVKFHQLRDLETGLFNT 613
++++ + +R + +RLV GF PF + F+Q + +TG+FN+
Sbjct: 372 HVLQSTPKRVLANYISWRLVQGFSPFLPPSAREPFYQFKANQTGMFNS 419
>Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical
protein B0001.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 142 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRN 252
L+G + +S+ D +A TD E S + R IAE+++ R+
Sbjct: 201 LRGCSWIMSVVDGKAQTDGEFSDKDLREIAEFIRERH 237
>AC006610-1|AAK85447.4| 360|Caenorhabditis elegans Hypothetical
protein C30F12.1 protein.
Length = 360
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 536 QESTCSPPP*FRVSDVACNDFTHFLSDCSDLSVLGVAR 423
Q + PPP ++ V CNDF S C D+S ++R
Sbjct: 61 QVLSTGPPP--GLAPVQCNDFDSCYSSCDDISHPSLSR 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,430,408
Number of Sequences: 27780
Number of extensions: 369695
Number of successful extensions: 1044
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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