Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00183
(788 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1153 - 34501778-34502961,34503052-34503219,34503306-34504263 33 0.26
09_06_0090 + 20787453-20787507,20787600-20788296,20788949-20789189 31 1.0
11_04_0014 - 12253341-12253358,12253520-12253729,12254388-122545... 31 1.4
02_04_0593 + 24177897-24178182,24178442-24178509,24178617-241788... 31 1.4
02_02_0171 - 7427862-7428293 31 1.4
06_01_0426 + 3050332-3050526,3050864-3051116,3051923-3051980,305... 30 1.8
02_03_0037 + 14215616-14216941 30 1.8
04_04_1351 - 32827136-32827984 30 2.4
06_03_0520 - 21700971-21701288,21703077-21703271,21703368-217035... 29 3.2
05_01_0334 - 2642998-2643063,2643125-2643169,2643552-2643617,264... 29 3.2
01_06_1529 - 38016208-38017296 29 3.2
08_01_0879 - 8633063-8633080,8633221-8633399,8633581-8634238 29 4.2
04_01_0377 - 4970034-4970687 29 4.2
02_04_0413 + 22681957-22682035,22682253-22682788 29 4.2
07_03_1490 - 26941322-26941417,26941850-26942377,26944590-269448... 29 5.6
04_04_0210 + 23616407-23618851 29 5.6
02_04_0412 + 22674903-22674969,22675179-22675519 29 5.6
01_07_0019 + 40494709-40494767,40495619-40495703,40495777-404958... 29 5.6
08_01_0656 + 5652383-5653009,5653260-5653736,5654969-5655289,565... 28 7.4
07_03_0866 - 22134215-22135351 28 7.4
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 28 7.4
07_01_0853 + 6982185-6983593,6985926-6986497,6987139-6988439 28 7.4
10_06_0143 - 11183574-11183761,11183989-11184344,11184437-111845... 28 9.7
09_04_0564 + 18565583-18566449,18569662-18570123 28 9.7
09_04_0225 - 15855544-15855727,15855796-15856406 28 9.7
08_02_1172 + 24898290-24899141,24900864-24901328 28 9.7
07_03_1488 - 26925166-26925729,26927946-26928184,26929247-269296... 28 9.7
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 28 9.7
01_05_0606 - 23607170-23607568,23607738-23607941,23608035-236081... 28 9.7
>02_05_1153 - 34501778-34502961,34503052-34503219,34503306-34504263
Length = 769
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 447 TVCRRSEKECDLPEYCTGQSDSVRTTFTR 533
+ CRRS+ + DLP CTG+S + T R
Sbjct: 158 STCRRSQSQGDLPGQCTGESGCCQNTMPR 186
>09_06_0090 + 20787453-20787507,20787600-20788296,20788949-20789189
Length = 330
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 354 CHPTTCMLRANATCGAGTCCDLQTCRPKSAGTVCRRSEKECDLPEYC 494
C T C++ N C A DL+ AG CR + + PEYC
Sbjct: 151 CGATGCLVDLNGPCPA----DLKVAGADGAGIACRSACEAFGTPEYC 193
>11_04_0014 -
12253341-12253358,12253520-12253729,12254388-12254523,
12254631-12254752,12254789-12254842,12254872-12255161,
12255737-12255948,12256008-12256475,12256560-12256856,
12257467-12258329,12258417-12258490,12258616-12258650,
12259024-12259087,12259452-12259733,12259870-12259946,
12260045-12260325
Length = 1160
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +2
Query: 509 FCPDDVYKMDTIPCNHGQAYCVKGSCRSHTDQCRLLWGVTGESSHDKCYMSANVKGN 679
FCP + M IPC G AYC S T C + G +S +CY ++ N
Sbjct: 204 FCPHGLTCM--IPCPLG-AYCPLSSLNKTTGICDPFYCRKGSTSQTRCYKKSSCPPN 257
>02_04_0593 +
24177897-24178182,24178442-24178509,24178617-24178840,
24179221-24179304,24180183-24180396,24181242-24181418,
24181507-24181626,24181854-24181998,24182055-24182065,
24182222-24182314
Length = 473
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 121 RRDTRSAPPCRAPCRSCGPSRGLWSWPPDPAPQSDS 14
RRD R A A + G G+W PP P P +DS
Sbjct: 33 RRDARGAAAA-AVAVAAGSGLGIWLLPPSPRPLADS 67
>02_02_0171 - 7427862-7428293
Length = 143
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 522 SSGQNRTARCSTPGGRTPSP-ISDTPS 445
S + R C+TPGGR PSP S TPS
Sbjct: 40 SPRRRRRRSCTTPGGRRPSPSTSATPS 66
>06_01_0426 +
3050332-3050526,3050864-3051116,3051923-3051980,
3052054-3052105,3052601-3052678,3053012-3053188,
3053594-3053806
Length = 341
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = -3
Query: 660 DM*HLSCELSPVTPHSSRHWSVCERQEPFTQYACP-WLHGMVSIL*TSSG---QNRTARC 493
D +L C+L T R S+ R+ PFT CP +LH M T+ G R
Sbjct: 237 DKANLECQLLQCTEKLERLQSILNREPPFT---CPIFLHVMEDPYITADGHTYDGEAIRA 293
Query: 492 STPGGRTPSPISDTP 448
G SP+++ P
Sbjct: 294 WLDAGHDTSPVTNLP 308
>02_03_0037 + 14215616-14216941
Length = 441
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 124 SRRDTRSAPPCRAPCRSCGPSRGLWSWPPDPAPQSDSWPRR 2
S + +APP + R GP +W + D P +DSW RR
Sbjct: 207 SNKGYSAAPPPPSDSRRGGP---VWGFNRDGGPDADSWERR 244
>04_04_1351 - 32827136-32827984
Length = 282
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 27 GAGSGGHDHSPRDGPQLRHGAR 92
G GSGG +SP P RHG R
Sbjct: 160 GGGSGGGGYSPSPSPPKRHGGR 181
>06_03_0520 -
21700971-21701288,21703077-21703271,21703368-21703538,
21704483-21704737,21704821-21704961,21705118-21705165
Length = 375
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -2
Query: 511 ESDCPVQYSGRSHSFSDLRHTVPADLGRQVCRSQQVPAPHV---ALARSMHVVGWQQR 347
E P +++G +D+ T+ GR+VC + + A H+ A+AR + GW+ R
Sbjct: 289 EEWAPERFAGGRFKVADMYKTMAFGAGRRVC-AGSLQATHIACAAIARFVQEFGWRLR 345
>05_01_0334 -
2642998-2643063,2643125-2643169,2643552-2643617,
2643625-2643730,2643770-2644349,2645780-2645871,
2645969-2646035,2646126-2646231,2646628-2646708,
2646789-2647058,2647158-2648788,2648834-2649385,
2650602-2651324,2651451-2651526
Length = 1486
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 365 DVHAACQCDVRRGDLLRSADLPTQVSGDGVSEIGEGVRPPGVLHRAVRFCPDDVYKMD 538
D AA +CD GDL+R+ + G+ G G G+ + V CP++ K++
Sbjct: 125 DAGAAAECDNNAGDLVRTQLVEEHKEGEDCGNDGAG---DGLETQFVEECPEEEEKVN 179
>01_06_1529 - 38016208-38017296
Length = 362
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 490 YSGRSHSFSDLRHTVPADLGRQVCRSQQVPAPHVALARSMHVVG 359
+ G H + H V DLG C +PAP AR+ H G
Sbjct: 205 FDGAIHVLAYSGHVVRIDLGTMACAVTALPAPVSCRARAGHCRG 248
>08_01_0879 - 8633063-8633080,8633221-8633399,8633581-8634238
Length = 284
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = +3
Query: 27 GAGSGG----HDHSPRDGPQLRHGARHGGAL 107
GAG GG H H P P L HG GG +
Sbjct: 125 GAGGGGDYYHHHHQPSSSPFLMHGGGGGGVV 155
>04_01_0377 - 4970034-4970687
Length = 217
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 393 CGAGTCCDLQTCRPKSAGTVCRRSEKECDLPEYC 494
C +G CC Q C + G C ++ C YC
Sbjct: 53 CQSGACCSSQRCGSQGGGATCSNNQC-CSQYGYC 85
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 100 PPCRAPCRSCGPSRGLWSWPPDPAPQSDSWP 8
PPC+ C CG S G PP P Q + P
Sbjct: 140 PPCKPGCCCCGCSGGECPPPPSPPCQHECPP 170
>07_03_1490 -
26941322-26941417,26941850-26942377,26944590-26944828,
26945891-26946318,26946728-26946837
Length = 466
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 333 RSDCHRCCHPTTCMLRANATCGAGTCCDL 419
R + R +PT C++R+N TC + C++
Sbjct: 181 RLEAMRFSNPTNCVIRSNGTCMSHVHCNM 209
>04_04_0210 + 23616407-23618851
Length = 814
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 511 LSGRRLQDGHHTVQPWTGVLREGLLPLAHGPVPAAVGRHRGELARQVL 654
L G L G H V P+ +GL A G V A +GR L R+V+
Sbjct: 545 LYGEPLLPGAHYVHPFAVAQLDGLRRQAVGVVAARLGRAEPPLRREVV 592
>02_04_0412 + 22674903-22674969,22675179-22675519
Length = 135
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 297 QCDCGMTPDRSGRSDCHRCCHP 362
+C G R DC RCCHP
Sbjct: 112 RCPSGACCARGFNGDCFRCCHP 133
>01_07_0019 +
40494709-40494767,40495619-40495703,40495777-40495836,
40495934-40496044,40496127-40496204,40496276-40496347,
40496944-40497057,40498034-40498538,40499011-40499108,
40499185-40499215,40499346-40499520,40499849-40500008,
40501436-40501855,40502313-40503203
Length = 952
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 443 GDGV-SEIGEGVRPPGVLHRAVRFCPDDVYKMDTIPCNHG 559
GDG S +G PP +LHR+ RF P+ + ++ + G
Sbjct: 729 GDGGGSPAQDGAEPP-LLHRSFRFTPESIARVKALAAGDG 767
>08_01_0656 +
5652383-5653009,5653260-5653736,5654969-5655289,
5655434-5655589,5656062-5656127,5656196-5656315
Length = 588
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 14/50 (28%)
Frame = -2
Query: 118 RDTRSAPP----CRAPCRSCG----------PSRGLWSWPPDPAPQSDSW 11
R T SAP C CRSCG P+ G S PP PA S W
Sbjct: 20 RKTGSAPSPTRSCTTSCRSCGRGRWRAPACSPAAGATSGPPRPASTSGVW 69
>07_03_0866 - 22134215-22135351
Length = 378
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 27 GAGSGGHDHSPRDGPQLRHGARHGG 101
G GSGG H+P P HG HGG
Sbjct: 13 GGGSGGSQHTP-PLPPAPHGNGHGG 36
>07_03_0471 +
18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Frame = -2
Query: 109 RSAPPCRAP-----CRSCGPSRGLWSWPPDPAPQSDSWP 8
RSAPP AP S PS W PP P P + P
Sbjct: 57 RSAPPTSAPGVPGSAGSPSPSSSSWPPPPPPPPDASQDP 95
>07_01_0853 + 6982185-6983593,6985926-6986497,6987139-6988439
Length = 1093
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -3
Query: 504 TARCSTPGGRTPSPISDTPSPLTWVGKSADRSRSPRRTSHWHA 376
T C T + P+P P PL+W+ SPRR W +
Sbjct: 654 TKNCETCASKNPAPPQPQPLPLSWL--------SPRRQWRWRS 688
>10_06_0143 -
11183574-11183761,11183989-11184344,11184437-11184592,
11184825-11184994,11185906-11186064,11186856-11187164,
11187281-11187576,11187825-11188174,11188279-11188434,
11188634-11188803,11189289-11189447,11190702-11191010,
11191172-11191458,11191911-11192263,11192366-11192521,
11192680-11192849,11195800-11195958,11196937-11197254,
11197658-11197786
Length = 1449
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = -2
Query: 454 HTVPADLGRQVCRSQQVPAPHVALARSMHVVGWQQRWQSLLPLRSGVIPQSHCSPGSMKP 275
+ V +G + PAP V S+ + RW L GVI H +PGS P
Sbjct: 223 NAVRIPVGWWIASDPNPPAPFVG--GSLEALDNAFRWAEKYNL--GVIVDLHAAPGSQNP 278
Query: 274 LPHVG 260
H G
Sbjct: 279 WEHSG 283
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 557 GQAYCVKGSCRSHTDQCRLLW 619
G+A+ VKG R+H C LW
Sbjct: 363 GKAFAVKGDWRTHEKNCGKLW 383
>09_04_0225 - 15855544-15855727,15855796-15856406
Length = 264
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 593 ASGKSPSRSTPVHGCTVWCPSCKRRPDRIGLP 498
++G +PS +T CT W SC R G P
Sbjct: 169 SAGATPSATTRCRSCTAWATSCP-GTSRAGCP 199
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 557 GQAYCVKGSCRSHTDQCRLLW 619
G+A+ VKG R+H C LW
Sbjct: 358 GKAFAVKGDWRTHEKNCGKLW 378
>07_03_1488 -
26925166-26925729,26927946-26928184,26929247-26929674,
26930084-26930193
Length = 446
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 333 RSDCHRCCHPTTCMLRANATCGAGTCCDL 419
R + R +PT C++R+N TC + C +
Sbjct: 181 RLEAMRFSNPTNCVIRSNGTCMSHVHCHM 209
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 522 SSGQNRTARCSTPGGRTPSPISDTPSPLTWVGKSADRSRSPR 397
S + ++R S P PSP S T + T+ S+D +PR
Sbjct: 219 SKSYSASSRVSLPSTSAPSPSSSTSTSPTYSCSSSDTVTTPR 260
>01_05_0606 -
23607170-23607568,23607738-23607941,23608035-23608113,
23608371-23608430,23608514-23608611,23608703-23608891,
23610670-23611368
Length = 575
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 63 DGPQLRHGARHGGALRVSRREVHH 134
+G L HG RHGG +R++ HH
Sbjct: 3 NGEPLWHGVRHGGGGGDARKQHHH 26
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,164,070
Number of Sequences: 37544
Number of extensions: 527605
Number of successful extensions: 2234
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2227
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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