Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00183
         (788 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.87 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.7  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   4.7  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   6.2  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   6.2  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   6.2  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   6.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.1  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   8.1  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 0.87
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 27  GAGSGGHDHSPRDGPQLRHGARHGG 101
           G G GG D   RD  + R G  +GG
Sbjct: 227 GGGGGGRDRDHRDRDREREGGGNGG 251


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +1

Query: 127 CIMSPSSTSVIPVRWSSCSL--KSLALSFE 210
           CI SP + SV+  RW   +   K LALS E
Sbjct: 875 CIKSPKAVSVLNSRWIPLNKIHKKLALSTE 904


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -2

Query: 85  PCRSCGPSRGL 53
           P RSCGP RGL
Sbjct: 525 PSRSCGPFRGL 535


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +1

Query: 106 CECPDEKCIMSPSSTSVIPVRWSSCSLKS 192
           C  P       PSS    P R +SCS +S
Sbjct: 62  CPVPCSSIWSRPSSMRCAPARTASCSTRS 90


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 399 AGTCCDLQTC 428
           AGTCC LQ C
Sbjct: 106 AGTCCTLQRC 115


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 568 LREGLLPLAHGPVPAAVGRHR 630
           +RE    L  GPVP A  RHR
Sbjct: 314 VREAAGRLRTGPVPGAAERHR 334


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 492  STPGGRTPSPISDTPS 445
            S+ GG TPS IS TPS
Sbjct: 1347 SSHGGPTPSIISHTPS 1362


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 19/80 (23%), Positives = 29/80 (36%)
 Frame = +3

Query: 240  ASSFIQSPTCGNGFIEPGEQCDCGMTPDRSGRSDCHRCCHPTTCMLRANATCGAGTCCDL 419
            +  +   PT   G +   + CDC    D +   +C+R      C+   + T  AG  CD 
Sbjct: 810  SDGYYGDPTGVYGSVRMCQPCDCNGNVDPNAVGNCNRT--TGECLKCIHNT--AGPHCD- 864

Query: 420  QTCRPKSAGTVCRRSEKECD 479
              C P   G         C+
Sbjct: 865  -QCLPGHFGDPLAEPHGSCE 883


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/46 (26%), Positives = 18/46 (39%)
 Frame = -2

Query: 145 WTDS*CTSRRDTRSAPPCRAPCRSCGPSRGLWSWPPDPAPQSDSWP 8
           W D     R D+ S+  C  P     P+  +W       P + +WP
Sbjct: 328 WNDQ--QKRCDSYSSSQCGCP--DIPPAPNMWPSMTSQTPSAKAWP 369


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,899
Number of Sequences: 2352
Number of extensions: 17136
Number of successful extensions: 41
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)