Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00183
(788 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g44430.1 68418.m05445 plant defensin-fusion protein, putative... 33 0.29
At5g44420.1 68418.m05444 plant defensin protein, putative (PDF1.... 33 0.29
At2g26020.1 68415.m03124 plant defensin-fusion protein, putative... 33 0.29
At3g13790.1 68416.m01742 beta-fructosidase (BFRUCT1) / beta-fruc... 32 0.50
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 31 0.87
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 31 0.87
At2g44300.1 68415.m05512 lipid transfer protein-related low simi... 31 1.2
At2g26010.1 68415.m03123 plant defensin-fusion protein, putative... 31 1.2
At1g04430.1 68414.m00434 dehydration-responsive protein-related ... 31 1.2
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 30 1.5
At4g08290.1 68417.m01370 nodulin MtN21 family protein similar to... 29 2.7
At2g04865.1 68415.m00502 expressed protein ; expression supporte... 29 3.5
At3g09000.1 68416.m01053 proline-rich family protein 29 4.6
At5g01820.1 68418.m00101 CBL-interacting protein kinase 14 (CIPK... 28 8.1
At3g27720.1 68416.m03461 zinc finger protein-related contains Pf... 28 8.1
At3g10200.1 68416.m01221 dehydration-responsive protein-related ... 28 8.1
>At5g44430.1 68418.m05445 plant defensin-fusion protein, putative
(PDF1.2c) plant defensin protein family member, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be); similar to antifungal
protein 1 preprotein [Raphanus sativus]
gi|609322|gb|AAA69541
Length = 80
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +2
Query: 620 GVTGESSHDKCYMSANVKGNKNGNCGYIRPAQR---YVPC 730
GV G S+ K N++G K+G+C Y+ PA + YVPC
Sbjct: 42 GVCGNSNACK-NQCINLEGAKHGSCNYVFPAHKCICYVPC 80
>At5g44420.1 68418.m05444 plant defensin protein, putative (PDF1.2a)
plant defensin protein family member, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be); similar to antifungal
protein 1 preprotein [Raphanus sativus]
gi|609322|gb|AAA69541
Length = 80
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +2
Query: 620 GVTGESSHDKCYMSANVKGNKNGNCGYIRPAQR---YVPC 730
GV G S+ K N++G K+G+C Y+ PA + YVPC
Sbjct: 42 GVCGNSNACK-NQCINLEGAKHGSCNYVFPAHKCICYVPC 80
>At2g26020.1 68415.m03124 plant defensin-fusion protein, putative
(PDF1.2b) plant defensin protein family member, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be); similar to antifungal
protein 1 preprotein [Raphanus sativus]
gi|609322|gb|AAA69541
Length = 80
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +2
Query: 620 GVTGESSHDKCYMSANVKGNKNGNCGYIRPAQR---YVPC 730
GV G S+ K N++G K+G+C Y+ PA + YVPC
Sbjct: 42 GVCGNSNACK-NQCINLEGAKHGSCNYVFPAHKCICYVPC 80
>At3g13790.1 68416.m01742 beta-fructosidase (BFRUCT1) /
beta-fructofuranosidase / cell wall invertase identical
to beta-fructofuranosidase GI:402740 from [Arabidopsis
thaliana]
Length = 584
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 506 RFCPDDVYKMD-TIP-CNHGQAYCVKGSCRSHTDQCRLLWGVTGESS 640
+F PD+ +KMD T P ++G+ Y K S ++ R+LWG T ESS
Sbjct: 300 KFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNR-RILWGWTNESS 345
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 557 GQAYCVKGSCRSHTDQCRLLW-GVTGESSHDKCYMSANVKGNKNGNCGY 700
G+A+ V+G R+H C LW + G K + ++K NG+ Y
Sbjct: 307 GKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAY 355
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 557 GQAYCVKGSCRSHTDQCRLLWGVT-GESSHDKCYMSANVKGNKNGN--CG 697
G+A+ VKG R+H C LW + G K + +VK NG+ CG
Sbjct: 268 GKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCG 317
>At2g44300.1 68415.m05512 lipid transfer protein-related low
similarity to lipid transfer protein Picea abies
GI:2627141; contains Pfam profile: PF00234: Protease
inhibitor/seed storage/LTP family
Length = 204
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 522 SSGQNRTARCSTPGGRTPSPISDTPSPLTWVGKSADRSRSPRRTSH 385
+ G N+T S P G +P PIS +P+ + G ++ R+ S +H
Sbjct: 132 AKGLNKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNH 177
>At2g26010.1 68415.m03123 plant defensin-fusion protein, putative
(PDF1.3) plant defensin protein family member, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be); similar to antifungal
protein 1 preprotein [Raphanus sativus]
gi|609322|gb|AAA69541
Length = 80
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 620 GVTGESSHDKCYMSANVKGNKNGNCGYIRPAQR---YVPC 730
GV G S+ K N++G K+G+C Y+ PA + Y PC
Sbjct: 42 GVCGNSNACK-NQCINLEGAKHGSCNYVFPAHKCICYFPC 80
>At1g04430.1 68414.m00434 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 623
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 19 HSEVLGLVATTIAHEMGHNFG---MEHDTEEHCECPDEK--CIMSPSSTSVIPVRW 171
HSE++ + ++M MEH E HC P+ + C++ P S +P++W
Sbjct: 91 HSEIIPCLDRNFIYQMRLKLDLSLMEH-YERHCPPPERRFNCLIPPPSGYKVPIKW 145
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 557 GQAYCVKGSCRSHTDQCRLLWGVT-GESSHDKCYMSANVKGNKNGN 691
G+A+ VKG R+H C LW + G K + +VK NG+
Sbjct: 346 GKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH 391
>At4g08290.1 68417.m01370 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 384
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -2
Query: 451 TVPADLGRQ--VCRSQQVPAPHVALARSMHVVGWQQRWQSLL--PLRSGVI 311
T PADL +C + V + VAL H GW W + L PL +G++
Sbjct: 213 TYPADLSLSALICLAGAVQSFAVALVVERHPSGWAVGWDARLFAPLYTGIV 263
>At2g04865.1 68415.m00502 expressed protein ; expression supported
by MPSS
Length = 667
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -2
Query: 463 DLRHTVPADLGRQVCRSQQVPAPHVALARSMH--VVGWQQRWQSLLP 329
DL +PAD+ R V +S+ V V L+ M + W+ RW++++P
Sbjct: 351 DLFQDIPADVQRWVRKSRGVDGG-VDLSNKMESELSEWEMRWENIVP 396
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 525 TSSGQNR-TARCSTPGGRTPSPISDTPSPLTWVGKSADRSRSPRRTS 388
+SSG +R T+R +TP R+ +P + T P+T A SRS TS
Sbjct: 148 SSSGSSRSTSRPATPTRRSTTPTTSTSRPVT---TRASNSRSSTPTS 191
>At5g01820.1 68418.m00101 CBL-interacting protein kinase 14 (CIPK14)
identical to CBL-interacting protein kinase 14
[Arabidopsis thaliana] gi|13249127|gb|AAK16689; contains
Pfam profiles PF00069: Protein kinase domain and
PF03822: NAF domain; identical to cDNA CBL-interacting
protein kinase 14 (CIPK14) GI:13249126
Length = 442
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 389 DVRRGDLLRSADLPTQVSGDGVSEIGEGVRPPGVLH 496
D++ +LL L ++S G+S + + +RP G+LH
Sbjct: 144 DLKPENLLLDEKLDLKISDFGLSALTDQIRPDGLLH 179
>At3g27720.1 68416.m03461 zinc finger protein-related contains
Pfam:PF01485 IBR domain
Length = 493
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Frame = +2
Query: 500 AVRFCPDDVYKMDTIPCNHGQAYCVKGSCRSHTDQCRLLWGVTGESSHDKC----YMSAN 667
A+R DD +D + C+ G +C SH+ L+W + + D+ +M+ N
Sbjct: 179 AIRNIKDDG-DVDEVECSCGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWMTVN 237
Query: 668 VKGNKNGNCGYIRPAQRYVPCAYEDARCG 754
K C +P Q+ C + +CG
Sbjct: 238 TK--LCPKCS--KPIQKRDGCNHMTCKCG 262
>At3g10200.1 68416.m01221 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 591
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +1
Query: 73 NFGMEHDTEEHCECPDEK--CIMSPSSTSVIPVRW 171
N D E HC + + C++ P + IP+RW
Sbjct: 99 NLSRREDLERHCPPLEHRLFCLVPPPNDYKIPIRW 133
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,139,370
Number of Sequences: 28952
Number of extensions: 347968
Number of successful extensions: 1159
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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