SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00182
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    25   2.7  
AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    25   2.7  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    25   3.5  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   4.6  

>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +3

Query: 639 VRLRLVRPMLRAKHVKTQMEESAGGGQEVGRLILGELAHCPPTSAC 776
           VRL  V  +L       Q  E +      G ++   L HC P  AC
Sbjct: 6   VRLWTVLLLLTTAASGQQTPEQSACVSHAGAILTAPLIHCHPLKAC 51


>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +3

Query: 429 CVRYRPI--LLPSETRVRPRADHPVPYLLAFNACMSLLGLLAYLRTQCLTEFENTSWIQL 602
           C +Y P   L P++ + R   +H     L FN       + AY+      ++E T+    
Sbjct: 73  CEKYAPTSDLYPNDPKDRALVNHR----LCFNLAFLYPQISAYVMAPIFFDYERTAIGLK 128

Query: 603 ALLLAVFSIEAYVR 644
            L LA+ + E Y++
Sbjct: 129 KLHLALAAFETYLQ 142


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 435 RYRPILLPSETRVRPRADHPV 497
           RY  ++  ++ R RPR DHP+
Sbjct: 9   RYPELVRRTQGRGRPRQDHPI 29


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 200 TEWTRPGGPAGTP 162
           T+W+RP  PAG P
Sbjct: 187 TQWSRPTEPAGPP 199


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 820,963
Number of Sequences: 2352
Number of extensions: 16332
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -