Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00182
         (787 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060370-1|AAL25409.1|  436|Drosophila melanogaster LD23009p pro...    71   2e-12
AE014298-3083|AAF50857.2|  436|Drosophila melanogaster CG32512-P...    71   2e-12
AY119227-1|AAM51087.1|  128|Drosophila melanogaster SD17342p pro...    30   3.1  
AE013599-1173|AAF58751.2|  128|Drosophila melanogaster CG12341-P...    30   3.1  
AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA...    29   7.2  
AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB...    29   7.2  

>AY060370-1|AAL25409.1|  436|Drosophila melanogaster LD23009p
           protein.
          Length = 436

 Score = 70.9 bits (166), Expect = 2e-12
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = +1

Query: 376 LYVGAVATHLGAQIWMTLVSGIVLYFSLPRHEFGRVQTILFPIY 507
           +++GA ATH G+QIWMT VSG+ LYFSLPRH FG+ Q ILFP Y
Sbjct: 268 VFLGAFATHFGSQIWMTFVSGLSLYFSLPRHVFGQCQQILFPRY 311



 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 36/88 (40%), Positives = 51/88 (57%)
 Frame = +3

Query: 498 PYLLAFNACMSLLGLLAYLRTQCLTEFENTSWIQLALLLAVFSIEAYVRLRLVRPMLRAK 677
           P   A NA +SL  L+ Y +   L+ +  ++ IQ+  L     IE  VRL LV PML+  
Sbjct: 309 PRYFALNAMLSLTMLVVYAK-YFLSGWTTSAGIQMGSLALAAGIEVVVRLYLVPPMLQLM 367

Query: 678 HVKTQMEESAGGGQEVGRLILGELAHCP 761
           H K ++E++ G GQEVG L+ G+L  CP
Sbjct: 368 HEKYRIEDAIGSGQEVGSLVQGDLVDCP 395


>AE014298-3083|AAF50857.2|  436|Drosophila melanogaster CG32512-PA
           protein.
          Length = 436

 Score = 70.9 bits (166), Expect = 2e-12
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = +1

Query: 376 LYVGAVATHLGAQIWMTLVSGIVLYFSLPRHEFGRVQTILFPIY 507
           +++GA ATH G+QIWMT VSG+ LYFSLPRH FG+ Q ILFP Y
Sbjct: 268 VFLGAFATHFGSQIWMTFVSGLSLYFSLPRHVFGQCQQILFPRY 311



 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 36/88 (40%), Positives = 51/88 (57%)
 Frame = +3

Query: 498 PYLLAFNACMSLLGLLAYLRTQCLTEFENTSWIQLALLLAVFSIEAYVRLRLVRPMLRAK 677
           P   A NA +SL  L+ Y +   L+ +  ++ IQ+  L     IE  VRL LV PML+  
Sbjct: 309 PRYFALNAMLSLTMLVVYAK-YFLSGWTTSAGIQMGSLALAAGIEVVVRLYLVPPMLQLM 367

Query: 678 HVKTQMEESAGGGQEVGRLILGELAHCP 761
           H K ++E++ G GQEVG L+ G+L  CP
Sbjct: 368 HEKYRIEDAIGSGQEVGSLVQGDLVDCP 395


>AY119227-1|AAM51087.1|  128|Drosophila melanogaster SD17342p
           protein.
          Length = 128

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 15/60 (25%), Positives = 32/60 (53%)
 Frame = +1

Query: 346 SASNVRGWRALYVGAVATHLGAQIWMTLVSGIVLYFSLPRHEFGRVQTILFPIYSRSTPA 525
           S + +  +R ++       L + I++   + +V +F+L +H+FGR  +IL  +    +PA
Sbjct: 20  SQARLNTFREMWYHVFLWALFSSIFIHTCAAVVAFFTLRKHKFGRFFSILILVMGFLSPA 79


>AE013599-1173|AAF58751.2|  128|Drosophila melanogaster CG12341-PA
           protein.
          Length = 128

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 15/60 (25%), Positives = 32/60 (53%)
 Frame = +1

Query: 346 SASNVRGWRALYVGAVATHLGAQIWMTLVSGIVLYFSLPRHEFGRVQTILFPIYSRSTPA 525
           S + +  +R ++       L + I++   + +V +F+L +H+FGR  +IL  +    +PA
Sbjct: 20  SQARLNTFREMWYHVFLWALFSSIFIHTCAAVVAFFTLRKHKFGRFFSILILVMGFLSPA 79


>AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA,
            isoform A protein.
          Length = 2602

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
 Frame = +2

Query: 59   LEAPTPPKVSRTLERMKLKHNITTDPV-----NEEKQREVE--YQPDLLAVSTQYTKIAY 217
            +E+PTPP +S  L R  ++   TT        N ++ RE +   QP    V+T+  K ++
Sbjct: 1259 IESPTPPPMSGQLMRSSIRLETTTTTTTSAVNNRDRDRETQDVGQPMQSVVTTKLAKKSF 1318

Query: 218  DV 223
            ++
Sbjct: 1319 EI 1320


>AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB,
            isoform B protein.
          Length = 2693

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
 Frame = +2

Query: 59   LEAPTPPKVSRTLERMKLKHNITTDPV-----NEEKQREVE--YQPDLLAVSTQYTKIAY 217
            +E+PTPP +S  L R  ++   TT        N ++ RE +   QP    V+T+  K ++
Sbjct: 1350 IESPTPPPMSGQLMRSSIRLETTTTTTTSAVNNRDRDRETQDVGQPMQSVVTTKLAKKSF 1409

Query: 218  DV 223
            ++
Sbjct: 1410 EI 1411


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,268,651
Number of Sequences: 53049
Number of extensions: 748760
Number of successful extensions: 2725
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2725
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)