Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00182
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical...    32   0.53 
AF043698-5|AAL65782.1|  104|Caenorhabditis elegans Saposin-like ...    31   0.71 
AC084158-18|AAK68583.1|  300|Caenorhabditis elegans Hypothetical...    30   1.6  

>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
            protein Y111B2A.14 protein.
          Length = 1481

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +2

Query: 434  PVSSYTSPFRDTSSAACRPSCSLSTRVQRLHELAGTPGVPPHTVPYGIREH 586
            P++SY SP    +S++   S  + T       +A +P  P HT P   R H
Sbjct: 1326 PINSYQSPSHHNNSSSMSNSSLMQTPHSNSSMIARSPQFPSHTSPMSQRFH 1376


>AF043698-5|AAL65782.1|  104|Caenorhabditis elegans Saposin-like
           protein family protein17 protein.
          Length = 104

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 16/66 (24%), Positives = 30/66 (45%)
 Frame = -1

Query: 712 PPADSSICVLTCLARSMGRTSRSLT*ASILNTANSSASCIHEVFSNSVRHCVRRYARSPS 533
           PP+ +++  +TC+A   G  ++ L     +   +  A C+ EV ++S  H    Y     
Sbjct: 22  PPSQATLACITCVATVKGVEAKMLHEGGNVAKHDVDAICLKEVPTHSAEHLCEEYGEHEV 81

Query: 532 KLMQAL 515
            +M  L
Sbjct: 82  DVMVTL 87


>AC084158-18|AAK68583.1|  300|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.9 protein.
          Length = 300

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 47  RDVTLEAPTPPKVSRTLE 100
           +DVT EAPTPPK ++T +
Sbjct: 155 KDVTAEAPTPPKTTKTTQ 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,590,869
Number of Sequences: 27780
Number of extensions: 351987
Number of successful extensions: 1166
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)