Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00180
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    51   7e-09
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   0.98 
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   1.7  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   1.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.3  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   3.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   3.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.9  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   9.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.1  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 51.2 bits (117), Expect = 7e-09
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = +1

Query: 250 HCAINYGQFTLPESCCVKKSILSTFAGNNCTV-DAANPGCGPKIGELYQKWNKPIAGVAI 426
           H   +Y    +P SCC      ++   N C++ ++   GC   + +  +        VAI
Sbjct: 149 HSLSDYNDKPIPASCC------NSPENNTCSISNSYTNGCVEALKDTVKLAGTVFGSVAI 202

Query: 427 GVACVEVVGALFALCLANSIRNMDRR 504
            +A VE++G + ALCLANSI+N +RR
Sbjct: 203 AIAIVELIGIICALCLANSIKNAERR 228



 Score = 42.3 bits (95), Expect = 3e-06
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +2

Query: 2   FLGCCGAIRESHCMVVTYA 58
           F GCCGAIRESHCM +T+A
Sbjct: 67  FFGCCGAIRESHCMTITFA 85


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 167 KKRSDANADEAAEAVFSELQRQ 232
           +KR DA  DE+ EA+F  + RQ
Sbjct: 292 EKRDDAK-DESVEAIFQSILRQ 312


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 545 KMKTSRDEHSNKKKKKK 595
           K K S +EH NKKKK K
Sbjct: 202 KSKAS-EEHGNKKKKNK 217


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +1

Query: 277 TLPESCCVKKSILSTFAGNNCTVDAANPGCGPKIGEL 387
           T  ESC V   I + + G N  +  A    G KI EL
Sbjct: 252 TFFESCGVADLIATCYGGRNRKICEAFVKTGKKISEL 288


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 401 FHFW*SSPILGPQP-GFAASTVQLLPAK 321
           F FW S  ++GP+P  F  +T  L+  K
Sbjct: 26  FDFWKSRGVVGPKPVPFFGTTKDLILVK 53


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 131 KESIMDGVGVLFKKRSDANADEAAEAVFSELQR 229
           K S+M   G+  +     + DE    VFS LQR
Sbjct: 96  KRSLMGAQGLSIRGLQINHEDETIRPVFSTLQR 128


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 61   LFAGDHHCASGDQRPPLHLRREHQGEHYGWRRR 159
            L+       + DQ+P  +L  +   + YG RR+
Sbjct: 963  LYKSSESSCNPDQKPTEYLLEDSMKQQYGKRRK 995


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = -1

Query: 205 LGGLVCVSVRSLFE*HADAIHNALLDALAVGEEEDADHHLHNDDHQQKDCVRDDHAVTLA 26
           L GL  ++ R LF      +H+A  D + VGE+  A   L     + K  + + +    A
Sbjct: 397 LNGLEGLTGRGLFISDIP-LHDATRDVILVGEQARAQDGLRRRMDKLKSSIEEANLAVSA 455

Query: 25  YR 20
            R
Sbjct: 456 ER 457


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +1

Query: 394 KWNKPIAGVAIGVACVEVVGALFALCL 474
           +WN   A     ++C+ +V  +   CL
Sbjct: 510 RWNSAFAIAPAVISCLGIVATMAVACL 536


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +1

Query: 394 KWNKPIAGVAIGVACVEVVGALFALCL 474
           +WN   A     ++C+ +V  +   CL
Sbjct: 600 RWNSAFAIAPAVISCLGIVATMAVACL 626


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 1/19 (5%)
 Frame = -1

Query: 94  HHLHNDDHQ-QKDCVRDDH 41
           HHL N  H  Q   V+D H
Sbjct: 142 HHLQNHHHHLQSTAVQDHH 160


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 94  DQRPPLHLRREHQGEHYGWR 153
           D RP   + +   G H+G R
Sbjct: 368 DSRPQYQIDKRSMGSHHGQR 387


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 37  LHGRHVRNLFAGDHHCAS 90
           LH   ++N+   DHH AS
Sbjct: 349 LHSFQMKNVTIVDHHTAS 366


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,342
Number of Sequences: 438
Number of extensions: 2628
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)