Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00179
         (470 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB prot...    42   1e-05
AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding pr...    25   1.3  
AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    25   1.8  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    24   3.1  
AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding pr...    24   3.1  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   5.4  

>AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB
           protein.
          Length = 60

 Score = 41.5 bits (93), Expect = 1e-05
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 61  MNFAKILSFV-FALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAK 237
           MNF K+   V  A+++ + +      PRWK  K++EK+GRN+     KA P   V+   K
Sbjct: 1   MNFTKLFILVAIAVLVVVGVQPVDGAPRWKFGKRLEKLGRNVFRAAKKALP---VIAGYK 57

Query: 238 AIG 246
           A+G
Sbjct: 58  ALG 60


>AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding
           protein AgamOBP1 protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 73  KILSFVFALVLALSMTSAAPEPR 141
           K+++FVFA +L  SMT     PR
Sbjct: 2   KLVTFVFAALLCCSMTLGDTTPR 24


>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 73  KILSFVFALVLALSMTSAAPEPR 141
           K+++FVFA+++  SMT     PR
Sbjct: 2   KLVTFVFAVLVCCSMTLGDTTPR 24


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 240 SFSRTEDLDRRARFDDAVTDVPAHFFNFLEDLP 142
           S+  T D  R+ R   AVT +PA +++ +  LP
Sbjct: 283 SYFPTPDAARKHRQICAVTRLPARYYDPITQLP 315


>AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding
           protein protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 73  KILSFVFALVLALSMTSAAPEPR 141
           K+++FVFA ++  SMT     PR
Sbjct: 2   KLVTFVFAALVCCSMTLGDTTPR 24


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 261 VLRSFSYSFSRTEDLDRRARFDDAVTDVPAHFFNFLEDLPPGL 133
           +  +F   F      D RA  D  ++++P    NF+  LPP +
Sbjct: 474 IFGTFGIIFQSPSLYDTRAPVDQQLSEIPLRKNNFM--LPPDI 514


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,069
Number of Sequences: 2352
Number of extensions: 7314
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)