Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00179
         (470 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97634-12|CAI95599.1|  195|Homo sapiens non-metastatic cells 4, ...    31   1.5  
AJ277892-3|CAD12457.1| 5604|Homo sapiens Novex-3 Titin Isoform p...    29   8.1  
AC023270-1|AAX88844.1| 5604|Homo sapiens unknown protein.              29   8.1  

>Z97634-12|CAI95599.1|  195|Homo sapiens non-metastatic cells 4,
           protein expressed in protein.
          Length = 195

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -2

Query: 223 GPRSPGPL*RCRHGCSCPFFQFS*RSSTWAREQRWSCSKP 104
           GPR+PGP    RHG   P      R  +W RE+     KP
Sbjct: 16  GPRAPGPSLLVRHGSGLPPSALK-RGPSWTRERTLVAVKP 54


>AJ277892-3|CAD12457.1| 5604|Homo sapiens Novex-3 Titin Isoform
            protein.
          Length = 5604

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 231  RTEDLDRRARFDDAVTDVPAHFFNFLEDL 145
            +TE+L+ +A   D VT  P H F FL D+
Sbjct: 4125 QTEELEPKAMPQDQVTQSPKHRFVFLSDI 4153


>AC023270-1|AAX88844.1| 5604|Homo sapiens unknown protein.
          Length = 5604

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 231  RTEDLDRRARFDDAVTDVPAHFFNFLEDL 145
            +TE+L+ +A   D VT  P H F FL D+
Sbjct: 4125 QTEELEPKAMPQDQVTQSPKHRFVFLSDI 4153


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,927,076
Number of Sequences: 237096
Number of extensions: 947334
Number of successful extensions: 1448
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)