Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00178
(788 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein. 49 2e-05
X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein. 49 2e-05
X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein. 49 2e-05
S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain pro... 49 2e-05
BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein. 49 2e-05
AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein. 49 2e-05
AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein p... 49 2e-05
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 44 8e-04
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 44 8e-04
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 44 8e-04
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 44 8e-04
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 44 8e-04
AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-speci... 43 0.001
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 38 0.031
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 38 0.031
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 38 0.031
U84744-1|AAB87737.1| 1531|Homo sapiens Chediak-Higashi syndrome ... 37 0.072
U72192-1|AAB39697.1| 1475|Homo sapiens lysosomal trafficking reg... 37 0.072
U70064-1|AAB41533.1| 2001|Homo sapiens lysosomal trafficking reg... 37 0.072
U67615-1|AAB41309.1| 3801|Homo sapiens beige protein homolog pro... 37 0.072
AL390765-1|CAI14952.1| 3801|Homo sapiens lysosomal trafficking r... 37 0.072
AL121997-1|CAI18987.1| 3801|Homo sapiens lysosomal trafficking r... 37 0.072
BX640729-1|CAE45845.1| 674|Homo sapiens hypothetical protein pr... 37 0.095
AY043325-1|AAL10682.1| 1406|Homo sapiens CRB1 isoform II precurs... 37 0.095
AY043324-1|AAL10681.1| 1376|Homo sapiens CRB1 isoform I precurso... 37 0.095
AL513325-3|CAM17208.1| 1294|Homo sapiens crumbs homolog 1 (Droso... 37 0.095
AL513325-2|CAH72584.1| 1406|Homo sapiens crumbs homolog 1 (Droso... 37 0.095
AL139136-3|CAM21656.1| 1294|Homo sapiens crumbs homolog 1 (Droso... 37 0.095
AL139136-2|CAI15311.1| 1406|Homo sapiens crumbs homolog 1 (Droso... 37 0.095
AL136322-4|CAM23328.1| 1294|Homo sapiens crumbs homolog 1 (Droso... 37 0.095
AL136322-3|CAI16646.1| 1406|Homo sapiens crumbs homolog 1 (Droso... 37 0.095
AL136322-1|CAI16644.1| 674|Homo sapiens crumbs homolog 1 (Droso... 37 0.095
AJ748821-1|CAG38658.1| 1294|Homo sapiens crumbs homologue 1 (alt... 37 0.095
AF154671-1|AAF01361.1| 1376|Homo sapiens CRB1 protein. 37 0.095
BC113373-1|AAI13374.1| 1331|Homo sapiens contactin associated pr... 36 0.17
BC093780-1|AAH93780.1| 1331|Homo sapiens contactin associated pr... 36 0.17
BC063822-1|AAH63822.1| 1009|Homo sapiens EGF-like, fibronectin t... 36 0.17
BC033188-1|AAH33188.1| 152|Homo sapiens EGF-like, fibronectin t... 36 0.17
BC033177-1|AAH33177.1| 152|Homo sapiens EGF-like, fibronectin t... 36 0.17
BC031251-1|AAH31251.1| 375|Homo sapiens EGF-like, fibronectin t... 36 0.17
AK097549-1|BAC05096.1| 775|Homo sapiens protein ( Homo sapiens ... 36 0.17
AK092994-1|BAC04013.1| 152|Homo sapiens protein ( Homo sapiens ... 36 0.17
AK092479-1|BAC03900.1| 463|Homo sapiens protein ( Homo sapiens ... 36 0.17
AF319045-1|AAK34932.1| 1331|Homo sapiens contactin-associated pr... 36 0.17
AF193613-1|AAF25199.1| 1331|Homo sapiens cell recognition molecu... 36 0.17
AC092676-1|AAS07479.1| 197|Homo sapiens unknown protein. 36 0.17
AB020675-1|BAA74891.1| 1339|Homo sapiens KIAA0868 protein protein. 36 0.17
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 36 0.22
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 36 0.22
M59832-1|AAA63215.1| 1130|Homo sapiens merosin protein. 36 0.22
BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein. 36 0.22
BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein. 36 0.22
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 36 0.22
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 36 0.22
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 36 0.22
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 36 0.22
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 36 0.22
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 36 0.22
AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit... 36 0.22
AJ316284-1|CAC87720.2| 1392|Homo sapiens neurexin 3-alpha protein. 35 0.38
AC009396-1|AAF21147.1| 351|Homo sapiens neurexin III protein. 35 0.38
AC008045-1|AAF28465.1| 154|Homo sapiens neurexin III protein. 35 0.38
AB018286-1|BAA34463.2| 1205|Homo sapiens KIAA0743 protein protein. 35 0.38
EF539882-1|ABS86974.1| 1547|Homo sapiens NRXN1-alpha protein. 34 0.67
BC150275-1|AAI50276.1| 1642|Homo sapiens neurexin 2 protein. 34 0.67
BC150247-1|AAI50248.1| 1496|Homo sapiens NRXN1 protein protein. 34 0.67
AK056528-1|BAB71205.1| 963|Homo sapiens protein ( Homo sapiens ... 34 0.67
AC044790-1|AAK68154.1| 1712|Homo sapiens NRXN2 protein. 34 0.67
AC007462-1|AAF03536.1| 681|Homo sapiens unknown protein. 34 0.67
AB177862-1|BAD66840.1| 1434|Homo sapiens KIAA0921 splice variant... 34 0.67
AB035356-1|BAA87821.1| 1477|Homo sapiens neurexin I-alpha protei... 34 0.67
AB035266-1|BAA94075.1| 1712|Homo sapiens neurexin II protein. 34 0.67
AB023138-1|BAA76765.2| 1658|Homo sapiens KIAA0921 protein protein. 34 0.67
AB011150-1|BAA25504.2| 1542|Homo sapiens KIAA0578 protein protein. 34 0.67
AF463518-1|AAL68839.1| 1311|Homo sapiens cell recognition protei... 33 0.89
AC097715-1|AAY24250.1| 271|Homo sapiens unknown protein. 33 0.89
AB100094-1|BAC55272.1| 1308|Homo sapiens hypothetical protein pr... 33 0.89
AB100093-1|BAC55271.1| 1235|Homo sapiens hypothetical protein pr... 33 0.89
AB100092-1|BAC55270.1| 1260|Homo sapiens hypothetical protein pr... 33 0.89
AB077881-1|BAB83897.1| 1306|Homo sapiens caspr5 protein. 33 0.89
AB051550-1|BAB21854.2| 1322|Homo sapiens KIAA1763 protein protein. 33 0.89
X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila F... 33 1.2
X70904-1|CAA50261.1| 414|Homo sapiens Laminin Ah protein. 33 1.2
AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven... 33 1.2
AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven... 33 1.2
AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven... 33 1.2
AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo ... 33 1.2
AC019159-1|AAX88894.1| 291|Homo sapiens unknown protein. 33 1.2
AC007682-1|AAY14894.1| 277|Homo sapiens unknown protein. 33 1.6
BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, al... 32 2.1
BC116180-1|AAI16181.1| 846|Homo sapiens COL24A1 protein protein. 32 2.1
BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, al... 32 2.1
BC046631-1|AAH46631.1| 278|Homo sapiens NRXN1 protein protein. 32 2.1
AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV colla... 32 2.1
AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, al... 32 2.1
AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, al... 32 2.1
AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, al... 32 2.1
AF099810-1|AAC68909.1| 252|Homo sapiens neurexin III-alpha prot... 32 2.1
AC026888-1|AAF87841.1| 328|Homo sapiens NRXNIII protein. 32 2.7
AC011440-1|AAF61277.1| 288|Homo sapiens NRXN3 protein. 32 2.7
CR788268-5|CAI95050.1| 1288|Homo sapiens contactin associated pr... 31 3.6
CR788268-2|CAI95046.1| 1175|Homo sapiens contactin associated pr... 31 3.6
BX664735-4|CAI16326.1| 1288|Homo sapiens contactin associated pr... 31 3.6
BX664735-1|CAI16324.1| 1175|Homo sapiens contactin associated pr... 31 3.6
BX649569-4|CAI12628.1| 1288|Homo sapiens contactin associated pr... 31 3.6
BX649569-1|CAI12626.1| 1175|Homo sapiens contactin associated pr... 31 3.6
BC101805-1|AAI01806.1| 811|Homo sapiens protocadherin gamma sub... 31 3.6
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 31 3.6
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 3.6
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 3.6
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 3.6
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 3.6
AL353729-6|CAH72042.1| 1039|Homo sapiens contactin associated pr... 31 3.6
AL353729-3|CAH72039.1| 1288|Homo sapiens contactin associated pr... 31 3.6
AL162501-4|CAH70490.1| 1039|Homo sapiens contactin associated pr... 31 3.6
AL162501-2|CAH70488.1| 1288|Homo sapiens contactin associated pr... 31 3.6
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 3.6
AK057327-1|BAB71429.1| 721|Homo sapiens protein ( Homo sapiens ... 31 3.6
AF333769-1|AAG52889.2| 1288|Homo sapiens cell recognition molecu... 31 3.6
AF152518-1|AAD43778.1| 811|Homo sapiens protocadherin gamma B2 ... 31 3.6
AF152331-1|AAD43725.1| 931|Homo sapiens protocadherin gamma B2 ... 31 3.6
AC004891-1|AAC36298.1| 208|Homo sapiens unknown protein. 31 3.6
AB051501-1|BAB21805.2| 1175|Homo sapiens KIAA1714 protein protein. 31 3.6
X96753-1|CAA65529.1| 2322|Homo sapiens melanoma-associated chond... 31 4.7
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 31 4.7
BC125179-1|AAI25180.1| 396|Homo sapiens NRXN1 protein protein. 31 4.7
AY359468-1|AAQ62842.1| 2322|Homo sapiens melanoma chondroitin su... 31 4.7
CR788268-4|CAI95048.1| 746|Homo sapiens contactin associated pr... 31 6.3
BX664735-3|CAI95321.1| 746|Homo sapiens contactin associated pr... 31 6.3
BX649569-3|CAI94998.1| 746|Homo sapiens contactin associated pr... 31 6.3
BC150194-1|AAI50195.1| 459|Homo sapiens NRXN3 protein protein. 31 6.3
BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 31 6.3
BC142649-1|AAI42650.1| 459|Homo sapiens NRXN3 protein protein. 31 6.3
BC068469-1|AAH68469.1| 432|Homo sapiens neurexin 3 protein. 31 6.3
BC059368-1|AAH59368.1| 432|Homo sapiens neurexin 3 protein. 31 6.3
AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 31 6.3
AL512424-4|CAI14259.1| 1461|Homo sapiens slit homolog 1 (Drosoph... 31 6.3
AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 31 6.3
AL442123-3|CAH70917.1| 1461|Homo sapiens slit homolog 1 (Drosoph... 31 6.3
AK054645-1|BAB70782.1| 604|Homo sapiens protein ( Homo sapiens ... 31 6.3
AJ493127-1|CAD37989.1| 398|Homo sapiens neurexin 3-beta protein. 31 6.3
AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein. 31 6.3
AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein. 31 6.3
X16351-1|CAA34400.1| 288|Homo sapiens SHBG related protein (288... 30 8.3
X16349-1|CAA34398.1| 402|Homo sapiens sex hormone-binding globu... 30 8.3
X05885-1|CAA29309.1| 356|Homo sapiens protein ( Human mRNA for ... 30 8.3
X05403-1|CAA28987.1| 381|Homo sapiens protein ( Human mRNA for ... 30 8.3
M31651-1|AAC18778.1| 402|Homo sapiens sex hormone-binding globu... 30 8.3
BC112186-1|AAI12187.1| 402|Homo sapiens sex hormone-binding glo... 30 8.3
BC101785-1|AAI01786.1| 402|Homo sapiens sex hormone-binding glo... 30 8.3
BC069597-1|AAH69597.1| 401|Homo sapiens SHBG protein protein. 30 8.3
BC051788-1|AAH51788.1| 929|Homo sapiens protocadherin gamma sub... 30 8.3
AF152523-1|AAD43783.1| 808|Homo sapiens protocadherin gamma B7 ... 30 8.3
AF152336-1|AAD43730.1| 929|Homo sapiens protocadherin gamma B7 ... 30 8.3
AC019105-1|AAY14716.1| 389|Homo sapiens unknown protein. 30 8.3
>Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +3
Query: 276 DRGFDGCMRQISINGVNQDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 440
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 1195 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1253
Query: 441 -ENPQLTLKFKTAKPNGLLFVYVRG 512
+ + F+T +PNGLLF Y G
Sbjct: 1254 FDGFEGGFNFRTLQPNGLLFYYASG 1278
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1693 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1751
Score = 31.5 bits (68), Expect = 3.6
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 533 DSISLSLVNGKLVV---VSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ++L L +G+LV V ++ YND WH + S+ +LV+D
Sbjct: 1518 DFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLEE 1577
Query: 704 DTAP-PPLHILDGVLFIGGV 760
P + G +++GGV
Sbjct: 1578 SLPPTEATWKIKGPIYLGGV 1597
>X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein.
Length = 1816
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +3
Query: 276 DRGFDGCMRQISINGVNQDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 440
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 1188 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1246
Query: 441 -ENPQLTLKFKTAKPNGLLFVYVRG 512
+ + F+T +PNGLLF Y G
Sbjct: 1247 FDGFEGGFNFRTLQPNGLLFYYASG 1271
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1686 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1744
Score = 31.5 bits (68), Expect = 3.6
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 533 DSISLSLVNGKLVV---VSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ++L L +G+LV V ++ YND WH + S+ +LV+D
Sbjct: 1511 DFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLEE 1570
Query: 704 DTAP-PPLHILDGVLFIGGV 760
P + G +++GGV
Sbjct: 1571 SLPPTEATWKIKGPIYLGGV 1590
>X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein.
Length = 1581
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +3
Query: 276 DRGFDGCMRQISINGVNQDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 440
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 953 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1011
Query: 441 -ENPQLTLKFKTAKPNGLLFVYVRG 512
+ + F+T +PNGLLF Y G
Sbjct: 1012 FDGFEGGFNFRTLQPNGLLFYYASG 1036
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1451 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1509
Score = 31.5 bits (68), Expect = 3.6
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 533 DSISLSLVNGKLVV---VSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ++L L +G+LV V ++ YND WH + S+ +LV+D
Sbjct: 1276 DFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLEE 1335
Query: 704 DTAP-PPLHILDGVLFIGGV 760
P + G +++GGV
Sbjct: 1336 SLPPTEATWKIKGPIYLGGV 1355
>S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain protein.
Length = 1816
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +3
Query: 276 DRGFDGCMRQISINGVNQDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 440
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 1188 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1246
Query: 441 -ENPQLTLKFKTAKPNGLLFVYVRG 512
+ + F+T +PNGLLF Y G
Sbjct: 1247 FDGFEGGFNFRTLQPNGLLFYYASG 1271
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1686 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1744
Score = 31.5 bits (68), Expect = 3.6
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 533 DSISLSLVNGKLVV---VSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ++L L +G+LV V ++ YND WH + S+ +LV+D
Sbjct: 1511 DFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLEE 1570
Query: 704 DTAP-PPLHILDGVLFIGGV 760
P + G +++GGV
Sbjct: 1571 SLPPTEATWKIKGPIYLGGV 1590
>BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein.
Length = 1816
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +3
Query: 276 DRGFDGCMRQISINGVNQDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 440
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 1188 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1246
Query: 441 -ENPQLTLKFKTAKPNGLLFVYVRG 512
+ + F+T +PNGLLF Y G
Sbjct: 1247 FDGFEGGFNFRTLQPNGLLFYYASG 1271
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1686 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1744
Score = 31.5 bits (68), Expect = 3.6
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 533 DSISLSLVNGKLVV---VSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ++L L +G+LV V ++ YND WH + S+ +LV+D
Sbjct: 1511 DFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLEE 1570
Query: 704 DTAP-PPLHILDGVLFIGGV 760
P + G +++GGV
Sbjct: 1571 SLPPTEATWKIKGPIYLGGV 1590
>AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +3
Query: 276 DRGFDGCMRQISINGVNQDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 440
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 1195 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1253
Query: 441 -ENPQLTLKFKTAKPNGLLFVYVRG 512
+ + F+T +PNGLLF Y G
Sbjct: 1254 FDGFEGGFNFRTLQPNGLLFYYASG 1278
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1693 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1751
Score = 31.5 bits (68), Expect = 3.6
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 533 DSISLSLVNGKLVV---VSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ++L L +G+LV V ++ YND WH + S+ +LV+D
Sbjct: 1518 DFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLEE 1577
Query: 704 DTAP-PPLHILDGVLFIGGV 760
P + G +++GGV
Sbjct: 1578 SLPPTEATWKIKGPIYLGGV 1597
>AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein
protein.
Length = 1852
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +3
Query: 276 DRGFDGCMRQISINGVNQDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 440
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 1224 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1282
Query: 441 -ENPQLTLKFKTAKPNGLLFVYVRG 512
+ + F+T +PNGLLF Y G
Sbjct: 1283 FDGFEGGFNFRTLQPNGLLFYYASG 1307
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1722 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1780
Score = 31.5 bits (68), Expect = 3.6
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +2
Query: 533 DSISLSLVNGKLVV---VSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ++L L +G+LV V ++ YND WH + S+ +LV+D
Sbjct: 1547 DFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLEE 1606
Query: 704 DTAP-PPLHILDGVLFIGGV 760
P + G +++GGV
Sbjct: 1607 SLPPTEATWKIKGPIYLGGV 1626
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 43.6 bits (98), Expect = 8e-04
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 EGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD-N 177
+G F SL +QDG + + LG+ E ++ + NDG+WH++ A R + S+ VD
Sbjct: 4257 QGKDFISLGLQDGHLVFRYQLGSGEARLV--SEDPINDGEWHRVTALREGRRGSIQVDGE 4314
Query: 178 EVLKAESNSPSADIPSLDTMNFGG 249
E++ S P+ + + ++ GG
Sbjct: 4315 ELVSGRSPGPNVAVNAKGSIYIGG 4338
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 43.6 bits (98), Expect = 8e-04
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 EGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD-N 177
+G F SL +QDG + + LG+ E ++ + NDG+WH++ A R + S+ VD
Sbjct: 4255 QGKDFISLGLQDGHLVFRYQLGSGEARLV--SEDPINDGEWHRVTALREGRRGSIQVDGE 4312
Query: 178 EVLKAESNSPSADIPSLDTMNFGG 249
E++ S P+ + + ++ GG
Sbjct: 4313 ELVSGRSPGPNVAVNAKGSVYIGG 4336
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 43.6 bits (98), Expect = 8e-04
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 EGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD-N 177
+G F SL +QDG + + LG+ E ++ + NDG+WH++ A R + S+ VD
Sbjct: 4255 QGKDFISLGLQDGHLVFRYQLGSGEARLV--SEDPINDGEWHRVTALREGRRGSIQVDGE 4312
Query: 178 EVLKAESNSPSADIPSLDTMNFGG 249
E++ S P+ + + ++ GG
Sbjct: 4313 ELVSGRSPGPNVAVNAKGSVYIGG 4336
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 43.6 bits (98), Expect = 8e-04
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 EGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD-N 177
+G F SL +QDG + + LG+ E ++ + NDG+WH++ A R + S+ VD
Sbjct: 4255 QGKDFISLGLQDGHLVFRYQLGSGEARLV--SEDPINDGEWHRVTALREGRRGSIQVDGE 4312
Query: 178 EVLKAESNSPSADIPSLDTMNFGG 249
E++ S P+ + + ++ GG
Sbjct: 4313 ELVSGRSPGPNVAVNAKGSVYIGG 4336
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 43.6 bits (98), Expect = 8e-04
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 EGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD-N 177
+G F SL +QDG + + LG+ E ++ + NDG+WH++ A R + S+ VD
Sbjct: 4234 QGKDFISLGLQDGHLVFRYQLGSGEARLV--SEDPINDGEWHRVTALREGRRGSIQVDGE 4291
Query: 178 EVLKAESNSPSADIPSLDTMNFGG 249
E++ S P+ + + ++ GG
Sbjct: 4292 ELVSGRSPGPNVAVNAKGSVYIGG 4315
>AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-specific
heparan sulfate proteoglycan core protein precursor
protein.
Length = 2331
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 EGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD-N 177
+G F SL +QDG + + LG+ E ++ + NDG+WH++ A R + S+ VD
Sbjct: 2195 QGKDFISLGLQDGHLVFRYQLGSGEARLV--SEDPINDGEWHRVTALREGRRGSIQVDGE 2252
Query: 178 EVLKAESNSPSADIPSLDTMNFGG 249
E++ S P+ + + + GG
Sbjct: 2253 ELVSGRSPGPNVAVNAKGNVYIGG 2276
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 38.3 bits (85), Expect = 0.031
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
G F +L + DGRV L+ G+ ++ + G+WH+L+ R + +L+VD E
Sbjct: 1417 GKDFLALALLDGRVQLRFDTGSGP--AVLTSAVPVEPGQWHRLELSRHWRRGTLSVDGET 1474
Query: 184 LKAESNSPSADIPSLDTMNFGGNKKE 261
+ D +LDT F G E
Sbjct: 1475 PVLGESPSGTDGLNLDTDLFVGGVPE 1500
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 38.3 bits (85), Expect = 0.031
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
G F +L + DGRV L+ G+ ++ + G+WH+L+ R + +L+VD E
Sbjct: 1398 GKDFLALALLDGRVQLRFDTGSGP--AVLTSAVPVEPGQWHRLELSRHWRRGTLSVDGET 1455
Query: 184 LKAESNSPSADIPSLDTMNFGGNKKE 261
+ D +LDT F G E
Sbjct: 1456 PVLGESPSGTDGLNLDTDLFVGGVPE 1481
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 38.3 bits (85), Expect = 0.031
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
G F +L + DGRV L+ G+ ++ + G+WH+L+ R + +L+VD E
Sbjct: 1417 GKDFLALALLDGRVQLRFDTGSGP--AVLTSAVPVEPGQWHRLELSRHWRRGTLSVDGET 1474
Query: 184 LKAESNSPSADIPSLDTMNFGGNKKE 261
+ D +LDT F G E
Sbjct: 1475 PVLGESPSGTDGLNLDTDLFVGGVPE 1500
>U84744-1|AAB87737.1| 1531|Homo sapiens Chediak-Higashi syndrome
protein short isoform protein.
Length = 1531
Score = 37.1 bits (82), Expect = 0.072
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 181 PRCPRSESTWQGTGERPIYAIYHHCMLGLCQLLSNPL----CCLMTPASKPFHLASVM 20
P PR + T Q E +++ Y H L L +LL L CCL + AS PF+ + M
Sbjct: 373 PFAPRQKKTLQEVQEDFVFSKYRHRALLLPELLEGVLQILICCLQSAASNPFYFSQAM 430
>U72192-1|AAB39697.1| 1475|Homo sapiens lysosomal trafficking
regulator LYST protein.
Length = 1475
Score = 37.1 bits (82), Expect = 0.072
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 181 PRCPRSESTWQGTGERPIYAIYHHCMLGLCQLLSNPL----CCLMTPASKPFHLASVM 20
P PR + T Q E +++ Y H L L +LL L CCL + AS PF+ + M
Sbjct: 373 PFAPRQKKTLQEVQEDFVFSKYRHRALLLPELLEGVLQILICCLQSAASNPFYFSQAM 430
>U70064-1|AAB41533.1| 2001|Homo sapiens lysosomal trafficking
regulator protein.
Length = 2001
Score = 37.1 bits (82), Expect = 0.072
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 181 PRCPRSESTWQGTGERPIYAIYHHCMLGLCQLLSNPL----CCLMTPASKPFHLASVM 20
P PR + T Q E +++ Y H L L +LL L CCL + AS PF+ + M
Sbjct: 373 PFAPRQKKTLQEVQEDFVFSKYRHRALLLPELLEGVLQILICCLQSAASNPFYFSQAM 430
>U67615-1|AAB41309.1| 3801|Homo sapiens beige protein homolog
protein.
Length = 3801
Score = 37.1 bits (82), Expect = 0.072
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 181 PRCPRSESTWQGTGERPIYAIYHHCMLGLCQLLSNPL----CCLMTPASKPFHLASVM 20
P PR + T Q E +++ Y H L L +LL L CCL + AS PF+ + M
Sbjct: 373 PFAPRQKKTLQEVQEDFVFSKYRHRALLLPELLEGVLQILICCLQSAASNPFYFSQAM 430
>AL390765-1|CAI14952.1| 3801|Homo sapiens lysosomal trafficking
regulator protein.
Length = 3801
Score = 37.1 bits (82), Expect = 0.072
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 181 PRCPRSESTWQGTGERPIYAIYHHCMLGLCQLLSNPL----CCLMTPASKPFHLASVM 20
P PR + T Q E +++ Y H L L +LL L CCL + AS PF+ + M
Sbjct: 373 PFAPRQKKTLQEVQEDFVFSKYRHRALLLPELLEGVLQILICCLQSAASNPFYFSQAM 430
>AL121997-1|CAI18987.1| 3801|Homo sapiens lysosomal trafficking
regulator protein.
Length = 3801
Score = 37.1 bits (82), Expect = 0.072
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 181 PRCPRSESTWQGTGERPIYAIYHHCMLGLCQLLSNPL----CCLMTPASKPFHLASVM 20
P PR + T Q E +++ Y H L L +LL L CCL + AS PF+ + M
Sbjct: 373 PFAPRQKKTLQEVQEDFVFSKYRHRALLLPELLEGVLQILICCLQSAASNPFYFSQAM 430
>BX640729-1|CAE45845.1| 674|Homo sapiens hypothetical protein
protein.
Length = 674
Score = 36.7 bits (81), Expect = 0.095
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 177
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 379 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 438
Query: 178 E 180
E
Sbjct: 439 E 439
>AY043325-1|AAL10682.1| 1406|Homo sapiens CRB1 isoform II precursor
protein.
Length = 1406
Score = 36.7 bits (81), Expect = 0.095
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 177
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 998 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 1057
Query: 178 E 180
E
Sbjct: 1058 E 1058
>AY043324-1|AAL10681.1| 1376|Homo sapiens CRB1 isoform I precursor
protein.
Length = 1376
Score = 36.7 bits (81), Expect = 0.095
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 177
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 998 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 1057
Query: 178 E 180
E
Sbjct: 1058 E 1058
>AL513325-3|CAM17208.1| 1294|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1294
Score = 36.7 bits (81), Expect = 0.095
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 177
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 886 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 945
Query: 178 E 180
E
Sbjct: 946 E 946
>AL513325-2|CAH72584.1| 1406|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1406
Score = 36.7 bits (81), Expect = 0.095
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 177
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 998 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 1057
Query: 178 E 180
E
Sbjct: 1058 E 1058
>AL139136-3|CAM21656.1| 1294|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1294
Score = 36.7 bits (81), Expect = 0.095
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 177
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 886 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 945
Query: 178 E 180
E
Sbjct: 946 E 946
>AL139136-2|CAI15311.1| 1406|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1406
Score = 36.7 bits (81), Expect = 0.095
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 177
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 998 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 1057
Query: 178 E 180
E
Sbjct: 1058 E 1058
>AL136322-4|CAM23328.1| 1294|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1294
Score = 36.7 bits (81), Expect = 0.095
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 177
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 886 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 945
Query: 178 E 180
E
Sbjct: 946 E 946
>AL136322-3|CAI16646.1| 1406|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1406
Score = 36.7 bits (81), Expect = 0.095
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 177
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 998 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 1057
Query: 178 E 180
E
Sbjct: 1058 E 1058
>AL136322-1|CAI16644.1| 674|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 674
Score = 36.7 bits (81), Expect = 0.095
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 177
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 379 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 438
Query: 178 E 180
E
Sbjct: 439 E 439
>AJ748821-1|CAG38658.1| 1294|Homo sapiens crumbs homologue 1
(alternative protein) protein.
Length = 1294
Score = 36.7 bits (81), Expect = 0.095
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 177
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 886 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 945
Query: 178 E 180
E
Sbjct: 946 E 946
>AF154671-1|AAF01361.1| 1376|Homo sapiens CRB1 protein.
Length = 1376
Score = 36.7 bits (81), Expect = 0.095
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 177
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 998 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 1057
Query: 178 E 180
E
Sbjct: 1058 E 1058
>BC113373-1|AAI13374.1| 1331|Homo sapiens contactin associated
protein-like 2 protein.
Length = 1331
Score = 35.9 bits (79), Expect = 0.17
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Frame = +3
Query: 279 RGFDGCMRQISINGVN-QDLS--ENLE--SIG-MAYGC--QFASLVSFNGTDSYLRFVDV 434
+ F GCM I+ NGVN DL+ + LE ++G +++ C + V FN T SYL
Sbjct: 331 KNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGR 389
Query: 435 TSENP-QLTLKFKTAKPNGLL 494
+++ ++ +F+T PNGLL
Sbjct: 390 LNQDLFSVSFQFRTWNPNGLL 410
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 43 VYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 174
V +GN I+V + ND +WH++ A R + + SL VD
Sbjct: 856 VSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVD 899
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 28 MQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAK---CSLTVDNEVLKAE 195
+ + +V + +++ T+ I + + NDG+WH++ RFLAK LT+D + A
Sbjct: 426 LTESKVGVHINITQTKMSQIDISSGSGLNDGQWHEV---RFLAKENFAILTIDGDEASAV 482
Query: 196 SNSPSADIPSLDTMNFGG 249
+ + + + FGG
Sbjct: 483 RTNSPLQVKTGEKYFFGG 500
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
+GF GC+R + +NGV DL E + + G GC
Sbjct: 931 QGFLGCIRSLRMNGVTLDLEERAKVTSGFISGC 963
>BC093780-1|AAH93780.1| 1331|Homo sapiens contactin associated
protein-like 2 protein.
Length = 1331
Score = 35.9 bits (79), Expect = 0.17
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Frame = +3
Query: 279 RGFDGCMRQISINGVN-QDLS--ENLE--SIG-MAYGC--QFASLVSFNGTDSYLRFVDV 434
+ F GCM I+ NGVN DL+ + LE ++G +++ C + V FN T SYL
Sbjct: 331 KNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGR 389
Query: 435 TSENP-QLTLKFKTAKPNGLL 494
+++ ++ +F+T PNGLL
Sbjct: 390 LNQDLFSVSFQFRTWNPNGLL 410
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 43 VYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 174
V +GN I+V + ND +WH++ A R + + SL VD
Sbjct: 856 VSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVD 899
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 28 MQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAK---CSLTVDNEVLKAE 195
+ + +V + +++ T+ I + + NDG+WH++ RFLAK LT+D + A
Sbjct: 426 LTESKVGVHINITQTKMSQIDISSGSGLNDGQWHEV---RFLAKENFAILTIDGDEASAV 482
Query: 196 SNSPSADIPSLDTMNFGG 249
+ + + + FGG
Sbjct: 483 RTNSPLQVKTGEKYFFGG 500
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
+GF GC+R + +NGV DL E + + G GC
Sbjct: 931 QGFLGCIRSLRMNGVTLDLEERAKVTSGFISGC 963
>BC063822-1|AAH63822.1| 1009|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 1009
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 883 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 935
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 533 DSISLSLVNGKLVVVSQREQLDTGL---NTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ISL L +G LV + ++ND +WH + + + K+ VDD+ T
Sbjct: 882 DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYG-ART 940
Query: 704 DTAPPPLHIL--DGVLFIGGV 760
+P + L +G L++GG+
Sbjct: 941 GKSPGMMRQLNINGALYVGGM 961
>BC033188-1|AAH33188.1| 152|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 152
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 26 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 78
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 533 DSISLSLVNGKLVVVSQREQLDTGL---NTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ISL L +G LV + ++ND +WH + + + K+ VDD+ T
Sbjct: 25 DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYG-ART 83
Query: 704 DTAPPPLHIL--DGVLFIGGV 760
+P + L +G L++GG+
Sbjct: 84 GKSPGMMRQLNINGALYVGGM 104
>BC033177-1|AAH33177.1| 152|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 152
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 26 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 78
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 533 DSISLSLVNGKLVVVSQREQLDTGL---NTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ISL L +G LV + ++ND +WH + + + K+ VDD+ T
Sbjct: 25 DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYG-ART 83
Query: 704 DTAPPPLHIL--DGVLFIGGV 760
+P + L +G L++GG+
Sbjct: 84 GKSPGMMRQLNINGALYVGGM 104
>BC031251-1|AAH31251.1| 375|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 375
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 249 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 301
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 533 DSISLSLVNGKLVVVSQREQLDTGL---NTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ISL L +G LV + ++ND +WH + + + K+ VDD+ T
Sbjct: 248 DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYG-ART 306
Query: 704 DTAPPPLHIL--DGVLFIGGV 760
+P + L +G L++GG+
Sbjct: 307 GKSPGMMRQLNINGALYVGGM 327
>AK097549-1|BAC05096.1| 775|Homo sapiens protein ( Homo sapiens
cDNA FLJ40230 fis, clone TESTI2022960, weakly similar to
Drosophila melanogaster SP2353 mRNA. ).
Length = 775
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 649 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 701
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 533 DSISLSLVNGKLVVVSQREQLDTGL---NTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ISL L +G LV + ++ND +WH + + + K+ VDD+ T
Sbjct: 648 DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYG-ART 706
Query: 704 DTAPPPLHIL--DGVLFIGGV 760
+P + L +G L++GG+
Sbjct: 707 GKSPGMMRQLNINGALYVGGM 727
>AK092994-1|BAC04013.1| 152|Homo sapiens protein ( Homo sapiens
cDNA FLJ35675 fis, clone SPLEN2018302, weakly similar to
BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN
CORE ).
Length = 152
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 26 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 78
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 533 DSISLSLVNGKLVVVSQREQLDTGL---NTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ISL L +G LV + ++ND +WH + + + K+ VDD+ T
Sbjct: 25 DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYG-ART 83
Query: 704 DTAPPPLHIL--DGVLFIGGV 760
+P + L +G L++GG+
Sbjct: 84 GKSPGMMRQLNINGALYVGGM 104
>AK092479-1|BAC03900.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ35160 fis, clone PLACE6011334, weakly similar to
BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN
CORE ).
Length = 463
Score = 35.9 bits (79), Expect = 0.17
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 337 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 389
Score = 31.9 bits (69), Expect = 2.7
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 533 DSISLSLVNGKLVVVSQREQLDTGL---NTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D ISL L +G LV + ++ND +WH + + + K+ VDD+ T
Sbjct: 336 DFISLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYG-ART 394
Query: 704 DTAPPPLHIL--DGVLFIGGV 760
+P + L +G L++GG+
Sbjct: 395 GKSPGMMRQLNINGALYVGGM 415
>AF319045-1|AAK34932.1| 1331|Homo sapiens contactin-associated
protein 2 protein.
Length = 1331
Score = 35.9 bits (79), Expect = 0.17
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Frame = +3
Query: 279 RGFDGCMRQISINGVN-QDLS--ENLE--SIG-MAYGC--QFASLVSFNGTDSYLRFVDV 434
+ F GCM I+ NGVN DL+ + LE ++G +++ C + V FN T SYL
Sbjct: 331 KNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGR 389
Query: 435 TSENP-QLTLKFKTAKPNGLL 494
+++ ++ +F+T PNGLL
Sbjct: 390 LNQDLFSVSFQFRTWNPNGLL 410
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 43 VYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 174
V +GN I+V + ND +WH++ A R + + SL VD
Sbjct: 856 VSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVD 899
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 28 MQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAK---CSLTVDNEVLKAE 195
+ + +V + +++ T+ I + + NDG+WH++ RFLAK LT+D + A
Sbjct: 426 LTESKVGVHINITQTKMSQIDISSGSGLNDGQWHEV---RFLAKENFAILTIDGDEASAV 482
Query: 196 SNSPSADIPSLDTMNFGG 249
+ + + + FGG
Sbjct: 483 RTNSPLQVKTGEKYFFGG 500
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
+GF GC+R + +NGV DL E + + G GC
Sbjct: 931 QGFLGCIRSLRMNGVTLDLEERAKVTSGFISGC 963
>AF193613-1|AAF25199.1| 1331|Homo sapiens cell recognition molecule
Caspr2 protein.
Length = 1331
Score = 35.9 bits (79), Expect = 0.17
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Frame = +3
Query: 279 RGFDGCMRQISINGVN-QDLS--ENLE--SIG-MAYGC--QFASLVSFNGTDSYLRFVDV 434
+ F GCM I+ NGVN DL+ + LE ++G +++ C + V FN T SYL
Sbjct: 331 KNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGR 389
Query: 435 TSENP-QLTLKFKTAKPNGLL 494
+++ ++ +F+T PNGLL
Sbjct: 390 LNQDLFSVSFQFRTWNPNGLL 410
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 43 VYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 174
V +GN I+V + ND +WH++ A R + + SL VD
Sbjct: 856 VSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVD 899
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 28 MQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAK---CSLTVDNEVLKAE 195
+ + +V + +++ T+ I + + NDG+WH++ RFLAK LT+D + A
Sbjct: 426 LTESKVGVHINITQTKMSQIDISSGSGLNDGQWHEV---RFLAKENFAILTIDGDEASAV 482
Query: 196 SNSPSADIPSLDTMNFGG 249
+ + + + FGG
Sbjct: 483 RTNSPLQVKTGEKYFFGG 500
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
+GF GC+R + +NGV DL E + + G GC
Sbjct: 931 QGFLGCIRSLRMNGVTLDLEERAKVTSGFISGC 963
>AC092676-1|AAS07479.1| 197|Homo sapiens unknown protein.
Length = 197
Score = 35.9 bits (79), Expect = 0.17
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Frame = +3
Query: 279 RGFDGCMRQISINGVN-QDLS--ENLE--SIG-MAYGC--QFASLVSFNGTDSYLRFVDV 434
+ F GCM I+ NGVN DL+ + LE ++G +++ C + V FN T SYL
Sbjct: 79 KNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGR 137
Query: 435 TSENP-QLTLKFKTAKPNGLL 494
+++ ++ +F+T PNGLL
Sbjct: 138 LNQDLFSVSFQFRTWNPNGLL 158
>AB020675-1|BAA74891.1| 1339|Homo sapiens KIAA0868 protein protein.
Length = 1339
Score = 35.9 bits (79), Expect = 0.17
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Frame = +3
Query: 279 RGFDGCMRQISINGVN-QDLS--ENLE--SIG-MAYGC--QFASLVSFNGTDSYLRFVDV 434
+ F GCM I+ NGVN DL+ + LE ++G +++ C + V FN T SYL
Sbjct: 339 KNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGR 397
Query: 435 TSENP-QLTLKFKTAKPNGLL 494
+++ ++ +F+T PNGLL
Sbjct: 398 LNQDLFSVSFQFRTWNPNGLL 418
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 43 VYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 174
V +GN I+V + ND +WH++ A R + + SL VD
Sbjct: 864 VSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVD 907
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 28 MQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAK---CSLTVDNEVLKAE 195
+ + +V + +++ T+ I + + NDG+WH++ RFLAK LT+D + A
Sbjct: 434 LTESKVGVHINITQTKMSQIDISSGSGLNDGQWHEV---RFLAKENFAILTIDGDEASAV 490
Query: 196 SNSPSADIPSLDTMNFGG 249
+ + + + FGG
Sbjct: 491 RTNSPLQVKTGEKYFFGG 508
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
+GF GC+R + +NGV DL E + + G GC
Sbjct: 939 QGFLGCIRSLRMNGVTLDLEERAKVTSGFISGC 971
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 DGKWHKLDARRFLAKCSLTVDNEVLKAESNSP-SADIPSLDTMNFGG 249
DG+WHK+ A + + LTVD ++A+S +P S + D + GG
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSADTNDPVFVGG 3068
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTV------- 171
F S+ + DG + + LG+ + V + + +NDGKW R + ++++
Sbjct: 2388 FMSVELTDGHIKVSYDLGS--GMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDTNQ 2445
Query: 172 -DNEVLKAESNSPSADIPSLDTMNFGG 249
+N + N+ D+ + D + FGG
Sbjct: 2446 EENIATSSSGNNFGLDLKADDKIYFGG 2472
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD +
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVDGASNRT 2870
Query: 193 ESNSPSADIPSLDTMNFGGNKKEYCKCRI 279
S + + + + GG Y RI
Sbjct: 2871 ISPKKADILDVVGMLYVGGLPINYTTRRI 2899
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain protein.
Length = 3110
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 DGKWHKLDARRFLAKCSLTVDNEVLKAESNSP-SADIPSLDTMNFGG 249
DG+WHK+ A + + LTVD ++A+S +P S + D + GG
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSADTNDPVFVGG 3068
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD +
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVDGASNRT 2870
Query: 193 ESNSPSADIPSLDTMNFGGNKKEYCKCRI 279
S + + + + GG Y RI
Sbjct: 2871 ISPKKADILDVVGMLYVGGLPINYTTRRI 2899
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTV------- 171
F S+ + DG + + LG+ + V + + +NDGKW R + ++ +
Sbjct: 2388 FMSVELTDGHIKVSYDLGS--GMASVVSNQNHNDGKWKSFTLSRIQKQANIYIVDIDTNQ 2445
Query: 172 -DNEVLKAESNSPSADIPSLDTMNFGG 249
+N + N+ D+ + D + FGG
Sbjct: 2446 EENIATSSSGNNFGLDLKADDKIYFGG 2472
>M59832-1|AAA63215.1| 1130|Homo sapiens merosin protein.
Length = 1130
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 DGKWHKLDARRFLAKCSLTVDNEVLKAESNSP-SADIPSLDTMNFGG 249
DG+WHK+ A + + LTVD ++A+S +P S + D + GG
Sbjct: 1042 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSADTNDPVFVGG 1088
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTV------- 171
F S+ + DG + + LG+ + V + + +NDGKW R + ++++
Sbjct: 408 FMSVELTDGHIKVSYDLGS--GMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDTNQ 465
Query: 172 -DNEVLKAESNSPSADIPSLDTMNFGG 249
+N + N+ D+ + D + FGG
Sbjct: 466 EENIATSSSGNNFGLDLKADDKIYFGG 492
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD +
Sbjct: 833 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVDGASNRT 890
Query: 193 ESNSPSADIPSLDTMNFGGNKKEYCKCRI 279
S + + + + GG Y RI
Sbjct: 891 ISPKKADILDVVGMLYVGGLPINYTTRRI 919
>BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein.
Length = 559
Score = 35.5 bits (78), Expect = 0.22
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 22 LLMQDGRVYLQVS--LGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKAE 195
L + DG+V V+ G T DGKWH L A + + +L VD + AE
Sbjct: 426 LELVDGKVLFHVNNGAGRITAAYEPKTATVLCDGKWHTLQANKSKHRITLIVDGNAVGAE 485
Query: 196 SNSPSADIPSLDTMN 240
SP S+DT N
Sbjct: 486 --SPHTQSTSVDTNN 498
>BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein.
Length = 747
Score = 35.5 bits (78), Expect = 0.22
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 22 LLMQDGRVYLQVS--LGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKAE 195
L + DG+V V+ G T DGKWH L A + + +L VD + AE
Sbjct: 614 LELVDGKVLFHVNNGAGRITAAYEPKTATVLCDGKWHTLQANKSKHRITLIVDGNAVGAE 673
Query: 196 SNSPSADIPSLDTMN 240
SP S+DT N
Sbjct: 674 --SPHTQSTSVDTNN 686
Score = 31.1 bits (67), Expect = 4.7
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTV------- 171
F S+ + GRV + LG+ ++ T R YN+G W+K+ +R + L V
Sbjct: 25 FLSIELFRGRVKVMTDLGSGPITLL--TDRRYNNGTWYKIAFQRNRKQGVLAVIDAYNTS 82
Query: 172 DNEVLKAESNSPSADIPSLD 231
+ E + E+ S+D+ LD
Sbjct: 83 NKETKQGETPGASSDLNRLD 102
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 DGKWHKLDARRFLAKCSLTVDNEVLKAESNSP-SADIPSLDTMNFGG 249
DG+WHK+ A + + LTVD ++A+S +P S + D + GG
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSADTNDPVFVGG 3068
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTV------- 171
F S+ + DG + + LG+ + V + + +NDGKW R + ++++
Sbjct: 2388 FMSVELTDGHIKVSYDLGS--GMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDTNQ 2445
Query: 172 -DNEVLKAESNSPSADIPSLDTMNFGG 249
+N + N+ D+ + D + FGG
Sbjct: 2446 EENIATSSSGNNFGLDLKADDKIYFGG 2472
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD +
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVDGASNRT 2870
Query: 193 ESNSPSADIPSLDTMNFGGNKKEYCKCRI 279
S + + + + GG Y RI
Sbjct: 2871 ISPKKADILDVVGMLYVGGLPINYTTRRI 2899
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 DGKWHKLDARRFLAKCSLTVDNEVLKAESNSP-SADIPSLDTMNFGG 249
DG+WHK+ A + + LTVD ++A+S +P S + D + GG
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSADTNDPVFVGG 3068
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTV------- 171
F S+ + DG + + LG+ + V + + +NDGKW R + ++++
Sbjct: 2388 FMSVELTDGHIKVSYDLGS--GMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDTNQ 2445
Query: 172 -DNEVLKAESNSPSADIPSLDTMNFGG 249
+N + N+ D+ + D + FGG
Sbjct: 2446 EENIATSSSGNNFGLDLKADDKIYFGG 2472
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD +
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVDGASNRT 2870
Query: 193 ESNSPSADIPSLDTMNFGGNKKEYCKCRI 279
S + + + + GG Y RI
Sbjct: 2871 ISPKKADILDVVGMLYVGGLPINYTTRRI 2899
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 DGKWHKLDARRFLAKCSLTVDNEVLKAESNSP-SADIPSLDTMNFGG 249
DG+WHK+ A + + LTVD ++A+S +P S + D + GG
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSADTNDPVFVGG 3068
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTV------- 171
F S+ + DG + + LG+ + V + + +NDGKW R + ++++
Sbjct: 2388 FMSVELTDGHIKVSYDLGS--GMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDTNQ 2445
Query: 172 -DNEVLKAESNSPSADIPSLDTMNFGG 249
+N + N+ D+ + D + FGG
Sbjct: 2446 EENIATSSSGNNFGLDLKADDKIYFGG 2472
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD +
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVDGASNRT 2870
Query: 193 ESNSPSADIPSLDTMNFGGNKKEYCKCRI 279
S + + + + GG Y RI
Sbjct: 2871 ISPKKADILDVVGMLYVGGLPINYTTRRI 2899
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 DGKWHKLDARRFLAKCSLTVDNEVLKAESNSP-SADIPSLDTMNFGG 249
DG+WHK+ A + + LTVD ++A+S +P S + D + GG
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSADTNDPVFVGG 3068
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTV------- 171
F S+ + DG + + LG+ + V + + +NDGKW R + ++++
Sbjct: 2388 FMSVELTDGHIKVSYDLGS--GMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDTNQ 2445
Query: 172 -DNEVLKAESNSPSADIPSLDTMNFGG 249
+N + N+ D+ + D + FGG
Sbjct: 2446 EENIATSSSGNNFGLDLKADDKIYFGG 2472
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD +
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVDGASNRT 2870
Query: 193 ESNSPSADIPSLDTMNFGGNKKEYCKCRI 279
S + + + + GG Y RI
Sbjct: 2871 ISPKKADILDVVGMLYVGGLPINYTTRRI 2899
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 DGKWHKLDARRFLAKCSLTVDNEVLKAESNSP-SADIPSLDTMNFGG 249
DG+WHK+ A + + LTVD ++A+S +P S + D + GG
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSADTNDPVFVGG 3068
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTV------- 171
F S+ + DG + + LG+ + V + + +NDGKW R + ++++
Sbjct: 2388 FMSVELTDGHIKVSYDLGS--GMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDTNQ 2445
Query: 172 -DNEVLKAESNSPSADIPSLDTMNFGG 249
+N + N+ D+ + D + FGG
Sbjct: 2446 EENIATSSSGNNFGLDLKADDKIYFGG 2472
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD +
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVDGASNRT 2870
Query: 193 ESNSPSADIPSLDTMNFGGNKKEYCKCRI 279
S + + + + GG Y RI
Sbjct: 2871 ISPKKADILDVVGMLYVGGLPINYTTRRI 2899
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 DGKWHKLDARRFLAKCSLTVDNEVLKAESNSP-SADIPSLDTMNFGG 249
DG+WHK+ A + + LTVD ++A+S +P S + D + GG
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSADTNDPVFVGG 3068
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTV------- 171
F S+ + DG + + LG+ + V + + +NDGKW R + ++++
Sbjct: 2388 FMSVELTDGHIKVSYDLGS--GMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDTNQ 2445
Query: 172 -DNEVLKAESNSPSADIPSLDTMNFGG 249
+N + N+ D+ + D + FGG
Sbjct: 2446 EENIATSSSGNNFGLDLKADDKIYFGG 2472
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD +
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVDGASNRT 2870
Query: 193 ESNSPSADIPSLDTMNFGGNKKEYCKCRI 279
S + + + + GG Y RI
Sbjct: 2871 ISPKKADILDVVGMLYVGGLPINYTTRRI 2899
>AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit
precursor variant protein.
Length = 1853
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 DGKWHKLDARRFLAKCSLTVDNEVLKAESNSP-SADIPSLDTMNFGG 249
DG+WHK+ A + + LTVD ++A+S +P S + D + GG
Sbjct: 1753 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPASTSADTNDPVFVGG 1799
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTV------- 171
F S+ + DG + + LG+ + V + + +NDGKW R + ++++
Sbjct: 1123 FMSVELTDGHIKVSYDLGS--GMASVVSNQNHNDGKWKSFTLSRIQKQANISIVDIDTNQ 1180
Query: 172 -DNEVLKAESNSPSADIPSLDTMNFGG 249
+N + N+ D+ + D + FGG
Sbjct: 1181 EENIATSSSGNNFGLDLKADDKIYFGG 1207
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD +
Sbjct: 1544 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVDGASNRT 1601
Query: 193 ESNSPSADIPSLDTMNFGGNKKEYCKCRI 279
S + + + + GG Y RI
Sbjct: 1602 ISPKKADILDVVGMLYVGGLPINYTTRRI 1630
>AJ316284-1|CAC87720.2| 1392|Homo sapiens neurexin 3-alpha protein.
Length = 1392
Score = 34.7 bits (76), Expect = 0.38
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 174
+ +L ++DG V L ++LG+ + I+ +ND WH + R L + +++VD
Sbjct: 303 YVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVD 357
Score = 34.7 bits (76), Expect = 0.38
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
FF++ + DG +YL + +G+ + + T + NDG+W+ +D +R +++V++
Sbjct: 505 FFAVELLDGNLYLLLDMGSGT-IKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPF 563
Query: 193 ESNSPSADIPSLDTMNFGG 249
++ S + M GG
Sbjct: 564 TASGESEILDLEGDMYLGG 582
Score = 33.9 bits (74), Expect = 0.67
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 22 LLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
L + GRV L V+LG + + G + ND +WH + R LTVD++V
Sbjct: 734 LELDGGRVKLMVNLGKGPETLYAG--QKLNDNEWHTVRVVRRGKSLKLTVDDDV 785
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
F L + DGRV L+ S+ E ++ + + ND WH L R + L +D E
Sbjct: 75 FLCLSLVDGRVQLRFSMDCAETAVL--SNKQVNDSSWHFLMVSRDRLRTVLMLDGE 128
Score = 31.9 bits (69), Expect = 2.7
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 EGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC-SLTVDN 177
+G F ++ + G ++ LGN ++I + R ND +WH + R + SL VD
Sbjct: 903 DGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDT 962
Query: 178 EVL 186
+V+
Sbjct: 963 KVV 965
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +2
Query: 533 DSISLSLVNGKLVVVSQREQLDTGL---NTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D + LSLV+G++ + + +T + NDS WH L V+ + L++D
Sbjct: 74 DFLCLSLVDGRVQLRFSMDCAETAVLSNKQVNDSSWHFLMVSRDRLRTVLMLDGEGQSGE 133
Query: 704 DTAPPPLHILDGVLFIGGV 760
P + LF+GGV
Sbjct: 134 LQPQRPYMDVVSDLFLGGV 152
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 617 NDSQWHVLTVTHNTSALKLVVDD 685
ND++WH + V +LKL VDD
Sbjct: 761 NDNEWHTVRVVRRGKSLKLTVDD 783
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 1130 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 1185
>AC009396-1|AAF21147.1| 351|Homo sapiens neurexin III protein.
Length = 351
Score = 34.7 bits (76), Expect = 0.38
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
FF++ + DG +YL + +G+ + + T + NDG+W+ +D +R +++V++
Sbjct: 100 FFAVELLDGNLYLLLDMGSGT-IKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPF 158
Query: 193 ESNSPSADIPSLDTMNFGG 249
++ S + M GG
Sbjct: 159 TASGESEILDLEGDMYLGG 177
>AC008045-1|AAF28465.1| 154|Homo sapiens neurexin III protein.
Length = 154
Score = 34.7 bits (76), Expect = 0.38
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 174
+ +L ++DG V L ++LG+ + I+ +ND WH + R L + +++VD
Sbjct: 52 YVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVD 106
>AB018286-1|BAA34463.2| 1205|Homo sapiens KIAA0743 protein protein.
Length = 1205
Score = 34.7 bits (76), Expect = 0.38
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 174
+ +L ++DG V L ++LG+ + I+ +ND WH + R L + +++VD
Sbjct: 76 YVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVD 130
Score = 34.7 bits (76), Expect = 0.38
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKA 192
FF++ + DG +YL + +G+ + + T + NDG+W+ +D +R +++V++
Sbjct: 278 FFAVELLDGNLYLLLDMGSGT-IKVKATQKKANDGEWYHVDIQRDGRSGTISVNSRRTPF 336
Query: 193 ESNSPSADIPSLDTMNFGG 249
++ S + M GG
Sbjct: 337 TASGESEILDLEGDMYLGG 355
Score = 31.9 bits (69), Expect = 2.7
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 EGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC-SLTVDN 177
+G F ++ + G ++ LGN ++I + R ND +WH + R + SL VD
Sbjct: 685 DGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDT 744
Query: 178 EVL 186
+V+
Sbjct: 745 KVV 747
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 617 NDSQWHVLTVTHNTSALKLVVDD 685
ND++WH + V +LKL VDD
Sbjct: 543 NDNEWHTVRVVRRGKSLKLTVDD 565
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 912 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 967
>EF539882-1|ABS86974.1| 1547|Homo sapiens NRXN1-alpha protein.
Length = 1547
Score = 33.9 bits (74), Expect = 0.67
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 144
FF++ M DG +YL + +G + + I + NDG+W+ +D +R
Sbjct: 580 FFAIEMLDGHLYLLLDMG-SGTIKIKALLKKVNDGEWYHVDFQR 622
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 22 LLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN-EVLKAES 198
+L + GR+ L S+ E ++ T NDG WH + RR +L +D E E
Sbjct: 82 ILTRGGRLQLSFSIFCAEPATLLADTPV-NDGAWHSVRIRRQFRNTTLFIDQVEAKWVEV 140
Query: 199 NSPSADIPSLDTMNFGG 249
S D+ + GG
Sbjct: 141 KSKRRDMTVFSGLFVGG 157
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 587 EQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDD 685
E L G N ND++WH + V +LKL VDD
Sbjct: 836 ETLFAGYNL-NDNEWHTVRVVRRGKSLKLTVDD 867
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
G + L + G++ ++ ++G T+D+ I + NDGK+H + R +L VD+
Sbjct: 1215 GDYLELHIHQGKIGVKFNVG-TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDS 1270
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 617 NDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHILDGVLFIGGV 760
ND+QWH + ++ +TS L V D + TA L L+IGGV
Sbjct: 1024 NDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGV 1071
>BC150275-1|AAI50276.1| 1642|Homo sapiens neurexin 2 protein.
Length = 1642
Score = 33.9 bits (74), Expect = 0.67
Identities = 16/55 (29%), Positives = 35/55 (63%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
+F++ + DG +YL + +G + + + ++R NDG+W +D +R K S++V++
Sbjct: 522 YFAMELLDGHLYLLLDMG-SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNS 575
>BC150247-1|AAI50248.1| 1496|Homo sapiens NRXN1 protein protein.
Length = 1496
Score = 33.9 bits (74), Expect = 0.67
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 144
FF++ M DG +YL + +G + + I + NDG+W+ +D +R
Sbjct: 532 FFAIEMLDGHLYLLLDMG-SGTIKIKALLKKVNDGEWYHVDFQR 574
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 22 LLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN-EVLKAES 198
+L + GR+ L S+ E ++ T NDG WH + RR +L +D E E
Sbjct: 82 ILTRGGRLQLSFSIFCAEPATLLADTPV-NDGAWHSVRIRRQFRNTTLFIDQVEAKWVEV 140
Query: 199 NSPSADIPSLDTMNFGG 249
S D+ + GG
Sbjct: 141 KSKRRDMTVFSGLFVGG 157
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 587 EQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDD 685
E L G N ND++WH + V +LKL VDD
Sbjct: 788 ETLFAGYNL-NDNEWHTVRVVRRGKSLKLTVDD 819
Score = 31.9 bits (69), Expect = 2.7
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 174
+ +L +++G V L ++LG+ + ++ +ND WH + R L + +++VD
Sbjct: 330 YVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVD 384
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
G + L + G++ ++ ++G T+D+ I + NDGK+H + R +L VD+
Sbjct: 1167 GDYLELHIHQGKIGVKFNVG-TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDS 1222
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 617 NDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHILDGVLFIGGV 760
ND+QWH + ++ +TS L V D + TA L L+IGGV
Sbjct: 976 NDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGV 1023
>AK056528-1|BAB71205.1| 963|Homo sapiens protein ( Homo sapiens
cDNA FLJ31966 fis, clone NT2RP7007925, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 963
Score = 33.9 bits (74), Expect = 0.67
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +1
Query: 22 LLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKAESN 201
LL +G + V TE + + T NDG WH + + +LT+D+E +
Sbjct: 418 LLSLEGGILRLVIQKMTERVAEILTGSNLNDGPWHSVSINARRNRITLTLDDEAAPPAPD 477
Query: 202 SPSADIPSLDTMNFGG 249
S I S ++ FGG
Sbjct: 478 STWVQIYSGNSYYFGG 493
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 55 VSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
+ +GN ++V + ND +WH + A R L + SL VDN
Sbjct: 853 IDVGNGPVELVVQSPSLLNDNQWHYVRAERNLKETSLQVDN 893
Score = 31.9 bits (69), Expect = 2.7
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 210 RRHTELRHYELRREQK---GILQVPDRGFDGCMRQISINGVNQDLSENLE-SIGMAYGCQ 377
R +E H+ L+ + G +GF GC+R + +NG DL E + + G+ GC
Sbjct: 899 RETSEEGHFRLQLNSQLFVGGTSSRQKGFLGCIRSLHLNGQKMDLEERAKVTSGVRPGCS 958
Query: 378 FASL 389
L
Sbjct: 959 IKKL 962
>AC044790-1|AAK68154.1| 1712|Homo sapiens NRXN2 protein.
Length = 1712
Score = 33.9 bits (74), Expect = 0.67
Identities = 16/55 (29%), Positives = 35/55 (63%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
+F++ + DG +YL + +G + + + ++R NDG+W +D +R K S++V++
Sbjct: 553 YFAMELLDGHLYLLLDMG-SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNS 606
>AC007462-1|AAF03536.1| 681|Homo sapiens unknown protein.
Length = 681
Score = 33.9 bits (74), Expect = 0.67
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 144
FF++ M DG +YL + +G + + I + NDG+W+ +D +R
Sbjct: 100 FFAIEMLDGHLYLLLDMG-SGTIKIKALLKKVNDGEWYHVDFQR 142
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 587 EQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDD 685
E L G N ND++WH + V +LKL VDD
Sbjct: 356 ETLFAGYNL-NDNEWHTVRVVRRGKSLKLTVDD 387
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 617 NDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHILDGVLFIGGV 760
ND+QWH + ++ +TS L V D + TA L L+IGGV
Sbjct: 544 NDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGV 591
>AB177862-1|BAD66840.1| 1434|Homo sapiens KIAA0921 splice variant 1
protein.
Length = 1434
Score = 33.9 bits (74), Expect = 0.67
Identities = 16/55 (29%), Positives = 35/55 (63%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
+F++ + DG +YL + +G + + + ++R NDG+W +D +R K S++V++
Sbjct: 275 YFAMELLDGHLYLLLDMG-SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNS 328
>AB035356-1|BAA87821.1| 1477|Homo sapiens neurexin I-alpha protein
protein.
Length = 1477
Score = 33.9 bits (74), Expect = 0.67
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 144
FF++ M DG +YL + +G + + I + NDG+W+ +D +R
Sbjct: 540 FFAIEMLDGHLYLLLDMG-SGTIKIKALLKKVNDGEWYHVDFQR 582
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 22 LLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN-EVLKAES 198
+L + GR+ L S+ E ++ T NDG WH + RR +L +D E E
Sbjct: 82 ILTRGGRLQLSFSIFCAEPATLLADTPV-NDGAWHSVRIRRQFRNTTLFIDQVEAKWVEV 140
Query: 199 NSPSADIPSLDTMNFGG 249
S D+ + GG
Sbjct: 141 KSKRRDMTVFSGLFVGG 157
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 587 EQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDD 685
E L G N ND++WH + V +LKL VDD
Sbjct: 796 ETLFAGYNL-NDNEWHTVRVVRRGKSLKLTVDD 827
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
G + L + G++ ++ ++G T+D+ I + NDGK+H + R +L VD+
Sbjct: 1175 GDYLELHIHQGKIGVKFNVG-TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDS 1230
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 617 NDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHILDGVLFIGGV 760
ND+QWH + ++ +TS L V D + TA L L+IGGV
Sbjct: 984 NDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGV 1031
>AB035266-1|BAA94075.1| 1712|Homo sapiens neurexin II protein.
Length = 1712
Score = 33.9 bits (74), Expect = 0.67
Identities = 16/55 (29%), Positives = 35/55 (63%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
+F++ + DG +YL + +G + + + ++R NDG+W +D +R K S++V++
Sbjct: 553 YFAMELLDGHLYLLLDMG-SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNS 606
>AB023138-1|BAA76765.2| 1658|Homo sapiens KIAA0921 protein protein.
Length = 1658
Score = 33.9 bits (74), Expect = 0.67
Identities = 16/55 (29%), Positives = 35/55 (63%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
+F++ + DG +YL + +G + + + ++R NDG+W +D +R K S++V++
Sbjct: 538 YFAMELLDGHLYLLLDMG-SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNS 591
>AB011150-1|BAA25504.2| 1542|Homo sapiens KIAA0578 protein protein.
Length = 1542
Score = 33.9 bits (74), Expect = 0.67
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 144
FF++ M DG +YL + +G + + I + NDG+W+ +D +R
Sbjct: 578 FFAIEMLDGHLYLLLDMG-SGTIKIKALLKKVNDGEWYHVDFQR 620
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 22 LLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN-EVLKAES 198
+L + GR+ L S+ E ++ T NDG WH + RR +L +D E E
Sbjct: 128 ILTRGGRLQLSFSIFCAEPATLLADTPV-NDGAWHSVRIRRQFRNTTLFIDQVEAKWVEV 186
Query: 199 NSPSADIPSLDTMNFGG 249
S D+ + GG
Sbjct: 187 KSKRRDMTVFSGLFVGG 203
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 587 EQLDTGLNTYNDSQWHVLTVTHNTSALKLVVDD 685
E L G N ND++WH + V +LKL VDD
Sbjct: 834 ETLFAGYNL-NDNEWHTVRVVRRGKSLKLTVDD 865
Score = 31.9 bits (69), Expect = 2.7
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 174
+ +L +++G V L ++LG+ + ++ +ND WH + R L + +++VD
Sbjct: 376 YVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVD 430
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
G + L + G++ ++ ++G T+D+ I + NDGK+H + R +L VD+
Sbjct: 1213 GDYLELHIHQGKIGVKFNVG-TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDS 1268
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 617 NDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHILDGVLFIGGV 760
ND+QWH + ++ +TS L V D + TA L L+IGGV
Sbjct: 1022 NDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGV 1069
>AF463518-1|AAL68839.1| 1311|Homo sapiens cell recognition protein
CASPR4 protein.
Length = 1311
Score = 33.5 bits (73), Expect = 0.89
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + V N L VD T AP H+ L+ LF+GG
Sbjct: 874 FNDNQWHHVRVERNMKEASLQVDQLTP-KTQPAPADGHVLLQLNSQLFVGG 923
Score = 31.5 bits (68), Expect = 3.6
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Frame = +3
Query: 273 PDRGFDGCMRQISINGVN-QDLSE----NLESIG-MAYGC-QFASL-VSFNGTDSYLRFV 428
P R F GC+ + NGV+ DL++ + ++G +++ C Q S+ V+F + SYL
Sbjct: 328 PHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALP 387
Query: 429 DVTSENP-QLTLKFKTAKPNGLL 494
D + E T +F+T GLL
Sbjct: 388 DFSGEEEVSATFQFRTWNKAGLL 410
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE 350
RGF GC+R + +NG+ DL E +
Sbjct: 929 RGFLGCIRSLQLNGMTLDLEERAQ 952
>AC097715-1|AAY24250.1| 271|Homo sapiens unknown protein.
Length = 271
Score = 33.5 bits (73), Expect = 0.89
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +1
Query: 22 LLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKAESN 201
LL +G + V TE + + T NDG WH + + +LT+D+E +
Sbjct: 64 LLSLEGGILRLVIQKMTERVAEILTGSNLNDGLWHSVSINARRNRITLTLDDEAAPPAPD 123
Query: 202 SPSADIPSLDTMNFGG 249
S I S ++ FGG
Sbjct: 124 STWVQIYSGNSYYFGG 139
>AB100094-1|BAC55272.1| 1308|Homo sapiens hypothetical protein
protein.
Length = 1308
Score = 33.5 bits (73), Expect = 0.89
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + V N L VD T AP H+ L+ LF+GG
Sbjct: 871 FNDNQWHHVRVERNMKEASLQVDQLTP-KTQPAPADGHVLLQLNSQLFVGG 920
Score = 31.5 bits (68), Expect = 3.6
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Frame = +3
Query: 273 PDRGFDGCMRQISINGVN-QDLSE----NLESIG-MAYGC-QFASL-VSFNGTDSYLRFV 428
P R F GC+ + NGV+ DL++ + ++G +++ C Q S+ V+F + SYL
Sbjct: 325 PHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALP 384
Query: 429 DVTSENP-QLTLKFKTAKPNGLL 494
D + E T +F+T GLL
Sbjct: 385 DFSGEEEVSATFQFRTWNKAGLL 407
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE 350
RGF GC+R + +NG+ DL E +
Sbjct: 926 RGFLGCIRSLQLNGMTLDLEERAQ 949
>AB100093-1|BAC55271.1| 1235|Homo sapiens hypothetical protein
protein.
Length = 1235
Score = 33.5 bits (73), Expect = 0.89
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + V N L VD T AP H+ L+ LF+GG
Sbjct: 798 FNDNQWHHVRVERNMKEASLQVDQLTP-KTQPAPADGHVLLQLNSQLFVGG 847
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE 350
RGF GC+R + +NG+ DL E +
Sbjct: 853 RGFLGCIRSLQLNGMTLDLEERAQ 876
>AB100092-1|BAC55270.1| 1260|Homo sapiens hypothetical protein
protein.
Length = 1260
Score = 33.5 bits (73), Expect = 0.89
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + V N L VD T AP H+ L+ LF+GG
Sbjct: 823 FNDNQWHHVRVERNMKEASLQVDQLTP-KTQPAPADGHVLLQLNSQLFVGG 872
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE 350
RGF GC+R + +NG+ DL E +
Sbjct: 878 RGFLGCIRSLQLNGMTLDLEERAQ 901
>AB077881-1|BAB83897.1| 1306|Homo sapiens caspr5 protein.
Length = 1306
Score = 33.5 bits (73), Expect = 0.89
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +1
Query: 22 LLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKAESN 201
LL +G + V TE + + T NDG WH + + +LT+D+E +
Sbjct: 417 LLSLEGGILRLVIQKMTERVAEILTGSNLNDGLWHSVSINARRNRITLTLDDEAAPPAPD 476
Query: 202 SPSADIPSLDTMNFGG 249
S I S ++ FGG
Sbjct: 477 STWVQIYSGNSYYFGG 492
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 55 VSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
+ +GN ++V + ND +WH + A R L + SL VDN
Sbjct: 852 IDVGNGPVELVVQSPSLLNDNQWHYVRAERNLKETSLQVDN 892
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 210 RRHTELRHYELRREQK---GILQVPDRGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
R +E H+ L+ + G +GF GC+R + +NG DL E + + G+ GC
Sbjct: 898 RETSEEGHFRLQLNSQLFVGGTSSRQKGFLGCIRSLHLNGQKMDLEERAKVTSGVRPGC 956
>AB051550-1|BAB21854.2| 1322|Homo sapiens KIAA1763 protein protein.
Length = 1322
Score = 33.5 bits (73), Expect = 0.89
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + V N L VD T AP H+ L+ LF+GG
Sbjct: 885 FNDNQWHHVRVERNMKEASLQVDQLTP-KTQPAPADGHVLLQLNSQLFVGG 934
Score = 31.5 bits (68), Expect = 3.6
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Frame = +3
Query: 273 PDRGFDGCMRQISINGVN-QDLSE----NLESIG-MAYGC-QFASL-VSFNGTDSYLRFV 428
P R F GC+ + NGV+ DL++ + ++G +++ C Q S+ V+F + SYL
Sbjct: 339 PHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALP 398
Query: 429 DVTSENP-QLTLKFKTAKPNGLL 494
D + E T +F+T GLL
Sbjct: 399 DFSGEEEVSATFQFRTWNKAGLL 421
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE 350
RGF GC+R + +NG+ DL E +
Sbjct: 940 RGFLGCIRSLQLNGMTLDLEERAQ 963
>X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila Fat
protein protein.
Length = 4590
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 617 NDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI--LDGVLFIGG 757
ND QWH + + N + +LV+D + ++ TAP L LD +F GG
Sbjct: 3909 NDGQWHAVALEVNGNYARLVLDQV-HTASGTAPGTLKTLNLDNYVFFGG 3956
>X70904-1|CAA50261.1| 414|Homo sapiens Laminin Ah protein.
Length = 414
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 284 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 342
>AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 270 VPDRGFDGCMRQISINGVNQDLSENLESIGMAYGC 374
V +R F GCMR +S++G N D++ + + G GC
Sbjct: 1612 VHNRQFVGCMRNLSVDGKNVDMAGFIANNGTREGC 1646
>AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 270 VPDRGFDGCMRQISINGVNQDLSENLESIGMAYGC 374
V +R F GCMR +S++G N D++ + + G GC
Sbjct: 1612 VHNRQFVGCMRNLSVDGKNVDMAGFIANNGTREGC 1646
>AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 270 VPDRGFDGCMRQISINGVNQDLSENLESIGMAYGC 374
V +R F GCMR +S++G N D++ + + G GC
Sbjct: 1612 VHNRQFVGCMRNLSVDGKNVDMAGFIANNGTREGC 1646
>AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo 2
protein.
Length = 3014
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 270 VPDRGFDGCMRQISINGVNQDLSENLESIGMAYGC 374
V +R F GCMR +S++G N D++ + + G GC
Sbjct: 1612 VHNRQFVGCMRNLSVDGKNVDMAGFIANNGTREGC 1646
>AC019159-1|AAX88894.1| 291|Homo sapiens unknown protein.
Length = 291
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 55 VSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
+ +GN ++V + ND +WH + A R L + SL VDN
Sbjct: 227 IDVGNGPVELVVQSPSLLNDNQWHYVRAERNLKETSLQVDN 267
>AC007682-1|AAY14894.1| 277|Homo sapiens unknown protein.
Length = 277
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 22 LLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN-EVLKAES 198
+L + GR+ L S+ E ++ T NDG WH + RR +L +D E E
Sbjct: 82 ILTRGGRLQLSFSIFCAEPATLLADTPV-NDGAWHSVRIRRQFRNTTLFIDQVEAKWVEV 140
Query: 199 NSPSADIPSLDTMNFGG 249
S D+ + GG
Sbjct: 141 KSKRRDMTVFSGLFVGG 157
>BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 539 ISLSLVNGKLVVVSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVD-DFDYFSTDTAP 715
+ + L+ KLVV + +Q + +D QWH +T ++ + V+ YFST+T P
Sbjct: 133 LGVQLLPKKLVVHIRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVECGKKYFSTETIP 192
>BC116180-1|AAI16181.1| 846|Homo sapiens COL24A1 protein protein.
Length = 846
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 539 ISLSLVNGKLVVVSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVD-DFDYFSTDTAP 715
+ + L+ KLVV + +Q + +D QWH +T ++ + V+ YFST+T P
Sbjct: 133 LGVQLLPKKLVVHIRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVECGKKYFSTETIP 192
>BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 539 ISLSLVNGKLVVVSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVD-DFDYFSTDTAP 715
+ + L+ KLVV + +Q + +D QWH +T ++ + V+ YFST+T P
Sbjct: 133 LGVQLLPKKLVVHIRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVECGKKYFSTETIP 192
>BC046631-1|AAH46631.1| 278|Homo sapiens NRXN1 protein protein.
Length = 278
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 22 LLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN-EVLKAES 198
+L + GR+ L S+ E ++ T NDG WH + RR +L +D E E
Sbjct: 82 ILTRGGRLQLSFSVFCAEPATLLADTPV-NDGAWHSVRIRRQFRNTTLFIDQVEAKWVEV 140
Query: 199 NSPSADIPSLDTMNFGG 249
S D+ + GG
Sbjct: 141 KSKRRDMTVFSGLFVGG 157
>AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV collagen
precursor protein.
Length = 1714
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 539 ISLSLVNGKLVVVSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVD-DFDYFSTDTAP 715
+ + L+ KLVV + +Q + +D QWH +T ++ + V+ YFST+T P
Sbjct: 133 LGVQLLPKKLVVHIRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVECGKKYFSTETIP 192
>AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 539 ISLSLVNGKLVVVSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVD-DFDYFSTDTAP 715
+ + L+ KLVV + +Q + +D QWH +T ++ + V+ YFST+T P
Sbjct: 133 LGVQLLPKKLVVHIRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVECGKKYFSTETIP 192
>AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 539 ISLSLVNGKLVVVSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVD-DFDYFSTDTAP 715
+ + L+ KLVV + +Q + +D QWH +T ++ + V+ YFST+T P
Sbjct: 133 LGVQLLPKKLVVHIRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVECGKKYFSTETIP 192
>AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 539 ISLSLVNGKLVVVSQREQLDTGLNTYNDSQWHVLTVTHNTSALKLVVD-DFDYFSTDTAP 715
+ + L+ KLVV + +Q + +D QWH +T ++ + V+ YFST+T P
Sbjct: 133 LGVQLLPKKLVVHIRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVECGKKYFSTETIP 192
>AF099810-1|AAC68909.1| 252|Homo sapiens neurexin III-alpha
protein.
Length = 252
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
F L + DGRV L+ S+ E ++ + + ND WH L R + L +D E
Sbjct: 75 FLCLSLVDGRVQLRFSMDCAETAVL--SNKQVNDSSWHFLMVSRDRLRTVLMLDGE 128
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +2
Query: 533 DSISLSLVNGKLVVVSQREQLDTGL---NTYNDSQWHVLTVTHNTSALKLVVDDFDYFST 703
D + LSLV+G++ + + +T + NDS WH L V+ + L++D
Sbjct: 74 DFLCLSLVDGRVQLRFSMDCAETAVLSNKQVNDSSWHFLMVSRDRLRTVLMLDGEGQSGE 133
Query: 704 DTAPPPLHILDGVLFIGGV 760
P + LF+GGV
Sbjct: 134 LQPQRPYMDVVSDLFLGGV 152
>AC026888-1|AAF87841.1| 328|Homo sapiens NRXNIII protein.
Length = 328
Score = 31.9 bits (69), Expect = 2.7
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 EGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC-SLTVDN 177
+G F ++ + G ++ LGN ++I + R ND +WH + R + SL VD
Sbjct: 155 DGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDT 214
Query: 178 EVL 186
+V+
Sbjct: 215 KVV 217
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 617 NDSQWHVLTVTHNTSALKLVVDD 685
ND++WH + V +LKL VDD
Sbjct: 13 NDNEWHTVRVVRRGKSLKLTVDD 35
>AC011440-1|AAF61277.1| 288|Homo sapiens NRXN3 protein.
Length = 288
Score = 31.9 bits (69), Expect = 2.7
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 EGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC-SLTVDN 177
+G F ++ + G ++ LGN ++I + R ND +WH + R + SL VD
Sbjct: 155 DGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDT 214
Query: 178 EVL 186
+V+
Sbjct: 215 KVV 217
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 617 NDSQWHVLTVTHNTSALKLVVDD 685
ND++WH + V +LKL VDD
Sbjct: 13 NDNEWHTVRVVRRGKSLKLTVDD 35
>CR788268-5|CAI95050.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + N L VD AP H+ L+ LFIGG
Sbjct: 871 FNDNQWHHVRAERNVKGASLQVDQLPQ-KMQPAPADGHVRLQLNSQLFIGG 920
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
RGF GC+R + +NGV DL E + G+ GC
Sbjct: 926 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
Score = 30.7 bits (66), Expect = 6.3
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQV-SLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
G F L ++DG++ L + G + + G NDG+WH + + ++ VD++
Sbjct: 415 GSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGA--GLNDGQWHSVSFSAKWSHMNVVVDDD 472
Query: 181 VLKAESNSPSADIPSLDTMNFGG 249
A + I S DT FGG
Sbjct: 473 T--AVQPLVAVLIDSGDTYYFGG 493
>CR788268-2|CAI95046.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + N L VD AP H+ L+ LFIGG
Sbjct: 919 FNDNQWHHVRAERNVKGASLQVDQLPQ-KMQPAPADGHVRLQLNSQLFIGG 968
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
RGF GC+R + +NGV DL E + G+ GC
Sbjct: 974 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 1006
Score = 30.7 bits (66), Expect = 6.3
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQV-SLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
G F L ++DG++ L + G + + G NDG+WH + + ++ VD++
Sbjct: 463 GSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGA--GLNDGQWHSVSFSAKWSHMNVVVDDD 520
Query: 181 VLKAESNSPSADIPSLDTMNFGG 249
A + I S DT FGG
Sbjct: 521 T--AVQPLVAVLIDSGDTYYFGG 541
>BX664735-4|CAI16326.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + N L VD AP H+ L+ LFIGG
Sbjct: 871 FNDNQWHHVRAERNVKGASLQVDQLPQ-KMQPAPADGHVRLQLNSQLFIGG 920
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
RGF GC+R + +NGV DL E + G+ GC
Sbjct: 926 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
Score = 30.7 bits (66), Expect = 6.3
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQV-SLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
G F L ++DG++ L + G + + G NDG+WH + + ++ VD++
Sbjct: 415 GSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGA--GLNDGQWHSVSFSAKWSHMNVVVDDD 472
Query: 181 VLKAESNSPSADIPSLDTMNFGG 249
A + I S DT FGG
Sbjct: 473 T--AVQPLVAVLIDSGDTYYFGG 493
>BX664735-1|CAI16324.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + N L VD AP H+ L+ LFIGG
Sbjct: 919 FNDNQWHHVRAERNVKGASLQVDQLPQ-KMQPAPADGHVRLQLNSQLFIGG 968
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
RGF GC+R + +NGV DL E + G+ GC
Sbjct: 974 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 1006
Score = 30.7 bits (66), Expect = 6.3
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQV-SLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
G F L ++DG++ L + G + + G NDG+WH + + ++ VD++
Sbjct: 463 GSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGA--GLNDGQWHSVSFSAKWSHMNVVVDDD 520
Query: 181 VLKAESNSPSADIPSLDTMNFGG 249
A + I S DT FGG
Sbjct: 521 T--AVQPLVAVLIDSGDTYYFGG 541
>BX649569-4|CAI12628.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + N L VD AP H+ L+ LFIGG
Sbjct: 871 FNDNQWHHVRAERNVKGASLQVDQLPQ-KMQPAPADGHVRLQLNSQLFIGG 920
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
RGF GC+R + +NGV DL E + G+ GC
Sbjct: 926 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
Score = 30.7 bits (66), Expect = 6.3
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQV-SLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
G F L ++DG++ L + G + + G NDG+WH + + ++ VD++
Sbjct: 415 GSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGA--GLNDGQWHSVSFSAKWSHMNVVVDDD 472
Query: 181 VLKAESNSPSADIPSLDTMNFGG 249
A + I S DT FGG
Sbjct: 473 T--AVQPLVAVLIDSGDTYYFGG 493
>BX649569-1|CAI12626.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + N L VD AP H+ L+ LFIGG
Sbjct: 919 FNDNQWHHVRAERNVKGASLQVDQLPQ-KMQPAPADGHVRLQLNSQLFIGG 968
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
RGF GC+R + +NGV DL E + G+ GC
Sbjct: 974 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 1006
Score = 30.7 bits (66), Expect = 6.3
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQV-SLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
G F L ++DG++ L + G + + G NDG+WH + + ++ VD++
Sbjct: 463 GSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGA--GLNDGQWHSVSFSAKWSHMNVVVDDD 520
Query: 181 VLKAESNSPSADIPSLDTMNFGG 249
A + I S DT FGG
Sbjct: 521 T--AVQPLVAVLIDSGDTYYFGG 541
>BC101805-1|AAI01806.1| 811|Homo sapiens protocadherin gamma
subfamily B, 2 protein.
Length = 811
Score = 31.5 bits (68), Expect = 3.6
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 183 AQSGVQFAQRR--HTELRHYELRREQKGILQVPDRGFDGCMRQISINGVNQDLSEN 344
AQSGV FAQR H +LR +EL LQ D+G +S+ + DL++N
Sbjct: 509 AQSGVVFAQRAFDHEQLRAFEL------TLQARDQGSPALSANVSLRVLVGDLNDN 558
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVS-LGNTEDLIIVGTT-RAYNDGKWHKLDARRFLAKCSLTVD 174
+F+L ++ GR+Y G+ ++ + Y+DGKWH++ A R A +T+D
Sbjct: 1569 YFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLD 1624
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVS-LGNTEDLIIVGTT-RAYNDGKWHKLDARRFLAKCSLTVD 174
+F+L ++ GR+Y G+ ++ + Y+DGKWH++ A R A +T+D
Sbjct: 1569 YFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLD 1624
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVS-LGNTEDLIIVGTT-RAYNDGKWHKLDARRFLAKCSLTVD 174
+F+L ++ GR+Y G+ ++ + Y+DGKWH++ A R A +T+D
Sbjct: 1569 YFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLD 1624
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVS-LGNTEDLIIVGTT-RAYNDGKWHKLDARRFLAKCSLTVD 174
+F+L ++ GR+Y G+ ++ + Y+DGKWH++ A R A +T+D
Sbjct: 1569 YFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLD 1624
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVS-LGNTEDLIIVGTT-RAYNDGKWHKLDARRFLAKCSLTVD 174
+F+L ++ GR+Y G+ ++ + Y+DGKWH++ A R A +T+D
Sbjct: 1569 YFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLD 1624
>AL353729-6|CAH72042.1| 1039|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1039
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + N L VD AP H+ L+ LFIGG
Sbjct: 783 FNDNQWHHVRAERNVKGASLQVDQLPQ-KMQPAPADGHVRLQLNSQLFIGG 832
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
RGF GC+R + +NGV DL E + G+ GC
Sbjct: 838 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 870
>AL353729-3|CAH72039.1| 1288|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1288
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + N L VD AP H+ L+ LFIGG
Sbjct: 871 FNDNQWHHVRAERNVKGASLQVDQLPQ-KMQPAPADGHVRLQLNSQLFIGG 920
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
RGF GC+R + +NGV DL E + G+ GC
Sbjct: 926 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
>AL162501-4|CAH70490.1| 1039|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1039
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + N L VD AP H+ L+ LFIGG
Sbjct: 783 FNDNQWHHVRAERNVKGASLQVDQLPQ-KMQPAPADGHVRLQLNSQLFIGG 832
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
RGF GC+R + +NGV DL E + G+ GC
Sbjct: 838 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 870
>AL162501-2|CAH70488.1| 1288|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1288
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + N L VD AP H+ L+ LFIGG
Sbjct: 871 FNDNQWHHVRAERNVKGASLQVDQLPQ-KMQPAPADGHVRLQLNSQLFIGG 920
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
RGF GC+R + +NGV DL E + G+ GC
Sbjct: 926 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVS-LGNTEDLIIVGTT-RAYNDGKWHKLDARRFLAKCSLTVD 174
+F+L ++ GR+Y G+ ++ + Y+DGKWH++ A R A +T+D
Sbjct: 1569 YFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLD 1624
>AK057327-1|BAB71429.1| 721|Homo sapiens protein ( Homo sapiens
cDNA FLJ32765 fis, clone TESTI2001852, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 721
Score = 31.5 bits (68), Expect = 3.6
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Frame = +3
Query: 273 PDRGFDGCMRQISINGVN-QDLSE----NLESIG-MAYGC-QFASL-VSFNGTDSYLRFV 428
P R F GC+ + NGV+ DL++ + ++G +++ C Q S+ V+F + SYL
Sbjct: 300 PHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALP 359
Query: 429 DVTSENP-QLTLKFKTAKPNGLL 494
D + E T +F+T GLL
Sbjct: 360 DFSGEEEVSATFQFRTWNKAGLL 382
>AF333769-1|AAG52889.2| 1288|Homo sapiens cell recognition molecule
CASPR3 protein.
Length = 1288
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + N L VD AP H+ L+ LFIGG
Sbjct: 871 FNDNQWHHVRAERNVKGASLQVDQLPQ-KMQPAPADGHVRLQLNSQLFIGG 920
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
RGF GC+R + +NGV DL E + G+ GC
Sbjct: 926 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
>AF152518-1|AAD43778.1| 811|Homo sapiens protocadherin gamma B2
short form protein protein.
Length = 811
Score = 31.5 bits (68), Expect = 3.6
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 183 AQSGVQFAQRR--HTELRHYELRREQKGILQVPDRGFDGCMRQISINGVNQDLSEN 344
AQSGV FAQR H +LR +EL LQ D+G +S+ + DL++N
Sbjct: 509 AQSGVVFAQRAFDHEQLRAFEL------TLQARDQGSPALSANVSLRVLVGDLNDN 558
>AF152331-1|AAD43725.1| 931|Homo sapiens protocadherin gamma B2
protein.
Length = 931
Score = 31.5 bits (68), Expect = 3.6
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 183 AQSGVQFAQRR--HTELRHYELRREQKGILQVPDRGFDGCMRQISINGVNQDLSEN 344
AQSGV FAQR H +LR +EL LQ D+G +S+ + DL++N
Sbjct: 509 AQSGVVFAQRAFDHEQLRAFEL------TLQARDQGSPALSANVSLRVLVGDLNDN 558
>AC004891-1|AAC36298.1| 208|Homo sapiens unknown protein.
Length = 208
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 43 VYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 174
V +GN I+V + ND +WH++ A R + + SL VD
Sbjct: 61 VSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVD 104
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
+GF GC+R + +NGV DL E + + G GC
Sbjct: 136 QGFLGCIRSLRMNGVTLDLEERAKVTSGFISGC 168
>AB051501-1|BAB21805.2| 1175|Homo sapiens KIAA1714 protein protein.
Length = 1175
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 614 YNDSQWHVLTVTHNTSALKLVVDDFDYFSTDTAPPPLHI---LDGVLFIGG 757
+ND+QWH + N L VD AP H+ L+ LFIGG
Sbjct: 919 FNDNQWHHVRAERNVKGASLQVDQLPQ-KMQPAPADGHVRLQLNSQLFIGG 968
Score = 31.5 bits (68), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
RGF GC+R + +NGV DL E + G+ GC
Sbjct: 974 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 1006
>X96753-1|CAA65529.1| 2322|Homo sapiens melanoma-associated
chondroitin sulfate proteoglycan (MCSP) protein.
Length = 2322
Score = 31.1 bits (67), Expect = 4.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 291 GCMRQISINGVNQDLSENLESIGMAYGCQ 377
GCM +S+NG + L E L + MA GC+
Sbjct: 353 GCMEDLSVNGQRRGLREALLTRNMAAGCR 381
>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
Length = 2628
Score = 31.1 bits (67), Expect = 4.7
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTV------- 171
F S+ + GRV + LG+ ++ T R YN+G W+K+ +R + L V
Sbjct: 2353 FLSIELFRGRVKVMTDLGSGPITLL--TDRRYNNGTWYKIAFQRNRKQGVLAVIDAYNTS 2410
Query: 172 DNEVLKAESNSPSADIPSLD 231
+ E + E+ S+D+ LD
Sbjct: 2411 NKETKQGETPGASSDLNRLD 2430
>BC125179-1|AAI25180.1| 396|Homo sapiens NRXN1 protein protein.
Length = 396
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
G + L + G++ ++ ++G T+D+ I + NDGK+H + R +L VD+
Sbjct: 94 GDYLELHIHQGKIGVKFNVG-TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDS 149
>AY359468-1|AAQ62842.1| 2322|Homo sapiens melanoma chondroitin
sulfate proteoglycan protein.
Length = 2322
Score = 31.1 bits (67), Expect = 4.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 291 GCMRQISINGVNQDLSENLESIGMAYGCQ 377
GCM +S+NG + L E L + MA GC+
Sbjct: 353 GCMEDLSVNGQRRGLREALLTRNMAAGCR 381
>CR788268-4|CAI95048.1| 746|Homo sapiens contactin associated
protein-like 3B protein.
Length = 746
Score = 30.7 bits (66), Expect = 6.3
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQV-SLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
G F L ++DG++ L + G + + G NDG+WH + + ++ VD++
Sbjct: 415 GSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGA--GLNDGQWHSVSFSAKWSHMNVVVDDD 472
Query: 181 VLKAESNSPSADIPSLDTMNFGG 249
A + I S DT FGG
Sbjct: 473 T--AVQPLVAVLIDSGDTYYFGG 493
>BX664735-3|CAI95321.1| 746|Homo sapiens contactin associated
protein-like 3B protein.
Length = 746
Score = 30.7 bits (66), Expect = 6.3
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQV-SLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
G F L ++DG++ L + G + + G NDG+WH + + ++ VD++
Sbjct: 415 GSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGA--GLNDGQWHSVSFSAKWSHMNVVVDDD 472
Query: 181 VLKAESNSPSADIPSLDTMNFGG 249
A + I S DT FGG
Sbjct: 473 T--AVQPLVAVLIDSGDTYYFGG 493
>BX649569-3|CAI94998.1| 746|Homo sapiens contactin associated
protein-like 3B protein.
Length = 746
Score = 30.7 bits (66), Expect = 6.3
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQV-SLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
G F L ++DG++ L + G + + G NDG+WH + + ++ VD++
Sbjct: 415 GSGSFVLFLKDGKLKLSLFQAGQSPRNVTAGA--GLNDGQWHSVSFSAKWSHMNVVVDDD 472
Query: 181 VLKAESNSPSADIPSLDTMNFGG 249
A + I S DT FGG
Sbjct: 473 T--AVQPLVAVLIDSGDTYYFGG 493
>BC150194-1|AAI50195.1| 459|Homo sapiens NRXN3 protein protein.
Length = 459
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 136 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 191
>BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1 (Drosophila)
protein.
Length = 1534
Score = 30.7 bits (66), Expect = 6.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 372 CQFASLVSFNGTDSYLRFVDVTS-ENPQLTLKFKTAKPNGLL 494
C+ V+F D+YL+F D+ + +TL+ TA+ NG+L
Sbjct: 1162 CEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL 1203
>BC142649-1|AAI42650.1| 459|Homo sapiens NRXN3 protein protein.
Length = 459
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 136 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 191
>BC068469-1|AAH68469.1| 432|Homo sapiens neurexin 3 protein.
Length = 432
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 136 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 191
>BC059368-1|AAH59368.1| 432|Homo sapiens neurexin 3 protein.
Length = 432
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 136 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 191
>AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1 (Drosophila)
protein.
Length = 1534
Score = 30.7 bits (66), Expect = 6.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 372 CQFASLVSFNGTDSYLRFVDVTS-ENPQLTLKFKTAKPNGLL 494
C+ V+F D+YL+F D+ + +TL+ TA+ NG+L
Sbjct: 1162 CEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL 1203
>AL512424-4|CAI14259.1| 1461|Homo sapiens slit homolog 1 (Drosophila)
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 6.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 372 CQFASLVSFNGTDSYLRFVDVTS-ENPQLTLKFKTAKPNGLL 494
C+ V+F D+YL+F D+ + +TL+ TA+ NG+L
Sbjct: 1162 CEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL 1203
>AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1 (Drosophila)
protein.
Length = 1534
Score = 30.7 bits (66), Expect = 6.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 372 CQFASLVSFNGTDSYLRFVDVTS-ENPQLTLKFKTAKPNGLL 494
C+ V+F D+YL+F D+ + +TL+ TA+ NG+L
Sbjct: 1162 CEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL 1203
>AL442123-3|CAH70917.1| 1461|Homo sapiens slit homolog 1 (Drosophila)
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 6.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 372 CQFASLVSFNGTDSYLRFVDVTS-ENPQLTLKFKTAKPNGLL 494
C+ V+F D+YL+F D+ + +TL+ TA+ NG+L
Sbjct: 1162 CEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL 1203
>AK054645-1|BAB70782.1| 604|Homo sapiens protein ( Homo sapiens
cDNA FLJ30083 fis, clone BGGI12001097, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 604
Score = 30.7 bits (66), Expect = 6.3
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +1
Query: 4 GGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 183
G F L ++DG++ L + + L V NDG+WH + + ++ VD++
Sbjct: 415 GSGSFILFLKDGKLKLSLFQAG-QSLRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDT 473
Query: 184 LKAESNSPSADIPSLDTMNFGGNKKEYCK 270
A + I S DT FG ++ C+
Sbjct: 474 --AVQPLVAVLIDSGDTYYFGALYEQSCE 500
>AJ493127-1|CAD37989.1| 398|Homo sapiens neurexin 3-beta protein.
Length = 398
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 7 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 177
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 136 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 191
>AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein.
Length = 1534
Score = 30.7 bits (66), Expect = 6.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 372 CQFASLVSFNGTDSYLRFVDVTS-ENPQLTLKFKTAKPNGLL 494
C+ V+F D+YL+F D+ + +TL+ TA+ NG+L
Sbjct: 1162 CEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL 1203
>AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein.
Length = 1618
Score = 30.7 bits (66), Expect = 6.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 372 CQFASLVSFNGTDSYLRFVDVTS-ENPQLTLKFKTAKPNGLL 494
C+ V+F D+YL+F D+ + +TL+ TA+ NG+L
Sbjct: 1246 CEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL 1287
>X16351-1|CAA34400.1| 288|Homo sapiens SHBG related protein (288
AA) protein.
Length = 288
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 90 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 143
>X16349-1|CAA34398.1| 402|Homo sapiens sex hormone-binding globulin
(SHBG) protein.
Length = 402
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 95 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 148
>X05885-1|CAA29309.1| 356|Homo sapiens protein ( Human mRNA for sex
hormon binding globulin (SHBG). ).
Length = 356
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 49 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 102
>X05403-1|CAA28987.1| 381|Homo sapiens protein ( Human mRNA for sex
hormone-binding globulin (SHBG). ).
Length = 381
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 74 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 127
>M31651-1|AAC18778.1| 402|Homo sapiens sex hormone-binding globulin
protein.
Length = 402
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 95 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 148
>BC112186-1|AAI12187.1| 402|Homo sapiens sex hormone-binding
globulin protein.
Length = 402
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 95 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 148
>BC101785-1|AAI01786.1| 402|Homo sapiens sex hormone-binding
globulin protein.
Length = 402
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 95 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 148
>BC069597-1|AAH69597.1| 401|Homo sapiens SHBG protein protein.
Length = 401
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 13 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 180
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 94 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 147
>BC051788-1|AAH51788.1| 929|Homo sapiens protocadherin gamma
subfamily B, 7 protein.
Length = 929
Score = 30.3 bits (65), Expect = 8.3
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 138 SPVPCQVLSDRGQRGAQSGVQFAQRR--HTELRHYELRREQKGILQVPDRGFDGCMRQIS 311
S + + LS AQSGV FAQR H +LR +EL LQ D+G +S
Sbjct: 494 SDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFEL------TLQARDQGSPALSANVS 547
Query: 312 INGVNQDLSEN 344
+ + D ++N
Sbjct: 548 LRVLVGDRNDN 558
>AF152523-1|AAD43783.1| 808|Homo sapiens protocadherin gamma B7
short form protein protein.
Length = 808
Score = 30.3 bits (65), Expect = 8.3
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 138 SPVPCQVLSDRGQRGAQSGVQFAQRR--HTELRHYELRREQKGILQVPDRGFDGCMRQIS 311
S + + LS AQSGV FAQR H +LR +EL LQ D+G +S
Sbjct: 494 SDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFEL------TLQARDQGSPALSANVS 547
Query: 312 INGVNQDLSEN 344
+ + D ++N
Sbjct: 548 LRVLVGDRNDN 558
>AF152336-1|AAD43730.1| 929|Homo sapiens protocadherin gamma B7
protein.
Length = 929
Score = 30.3 bits (65), Expect = 8.3
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 138 SPVPCQVLSDRGQRGAQSGVQFAQRR--HTELRHYELRREQKGILQVPDRGFDGCMRQIS 311
S + + LS AQSGV FAQR H +LR +EL LQ D+G +S
Sbjct: 494 SDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFEL------TLQARDQGSPALSANVS 547
Query: 312 INGVNQDLSEN 344
+ + D ++N
Sbjct: 548 LRVLVGDRNDN 558
>AC019105-1|AAY14716.1| 389|Homo sapiens unknown protein.
Length = 389
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 279 RGFDGCMRQISINGVNQDLSENLE-SIGMAYGC 374
+GF GC+R + +NG DL E + + G+ GC
Sbjct: 7 KGFLGCIRSLHLNGQKMDLEERAKVTSGVRPGC 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,829,289
Number of Sequences: 237096
Number of extensions: 2428174
Number of successful extensions: 6134
Number of sequences better than 10.0: 155
Number of HSP's better than 10.0 without gapping: 5307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6111
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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