Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00177
(769 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g47800.1 68416.m05207 aldose 1-epimerase family protein simil... 89 2e-18
At3g17940.1 68416.m02284 aldose 1-epimerase family protein simil... 84 1e-16
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 75 4e-14
At3g01260.1 68416.m00032 aldose 1-epimerase family protein simil... 44 1e-04
At3g03880.1 68416.m00401 expressed protein 31 1.1
At3g17480.1 68416.m02233 F-box family protein contains F-box dom... 29 3.4
At2g23000.1 68415.m02743 serine carboxypeptidase S10 family prot... 29 3.4
At3g15030.2 68416.m01902 TCP family transcription factor, putati... 28 7.9
At3g15030.1 68416.m01901 TCP family transcription factor, putati... 28 7.9
At1g71410.1 68414.m08247 protein kinase family protein contains ... 28 7.9
>At3g47800.1 68416.m05207 aldose 1-epimerase family protein similar
to ALDOSE 1-EPIMERASE PRECURSOR GB:P05149 [SP|P05149]
from [Acinetobacter calcoaceticus]; contains Pfam
profile PF01263 Aldose 1-epimerase
Length = 358
Score = 89.4 bits (212), Expect = 2e-18
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 GFDELDGYVNRNTPYLGTTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHGGINGFNKA 431
GFD +DGY N +T Y G VGR ANRIGGAKF ++G Y+ N G++ LHGG GF+
Sbjct: 70 GFDTVDGYKN-DTTYFGAIVGRVANRIGGAKFKLNGHLYKTDPNEGRNTLHGGSKGFSDV 128
Query: 432 NWN--STVDGTKVIFSYLSKDGEEGYPG 509
W+ V + + F+Y S DGEEG+PG
Sbjct: 129 IWSVQKYVPTSHITFTYDSFDGEEGFPG 156
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 503 PGDLITNITYEVTEDNALHVDFMSXXXXXXXXXXXX-HSYFNLAGHETGVQEIYNHIFVI 679
PG++ +TY + +N L V + H+Y+NL H +G I +H +
Sbjct: 155 PGNVTVKVTYMLIGENKLGVKMEAKPLNKPTPINLALHTYWNLHSHNSG--NILSHKIQL 212
Query: 680 NADKITETDSGSIPTGGFISVGGTPYD 760
A KIT D IPTG S+ GTPYD
Sbjct: 213 LAGKITPVDDKLIPTGEITSITGTPYD 239
Score = 34.3 bits (75), Expect = 0.091
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +1
Query: 145 TWRASDG-FSVSVISYGATIQSIQVPDKYGITSDVVLG 255
T++ + G SV+ +YGA + S+ +PD++G DVVLG
Sbjct: 33 TYKLTRGSLSVTFTNYGAVMTSLLLPDRHGKQDDVVLG 70
>At3g17940.1 68416.m02284 aldose 1-epimerase family protein similar
to ALDOSE 1-EPIMERASE PRECURSOR GB:P05149 [SP|P05149]
from [Acinetobacter calcoaceticus]; contains Pfam
profile PF01263 Aldose 1-epimerase
Length = 341
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/91 (49%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Frame = +3
Query: 252 GFDELDGYVNRNTPYLGTTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHGGINGFNKA 431
GFD +D YV PY G VGR ANRI KFS++G Y L N + LHGG GF+K
Sbjct: 48 GFDSVDPYVKGLAPYFGCIVGRVANRIKEGKFSLNGVNYTLPINKPPNSLHGGNKGFDKK 107
Query: 432 NW---NSTVDGTK--VIFSYLSKDGEEGYPG 509
W DG K + F Y S DGEEGYPG
Sbjct: 108 IWEVAGHKRDGEKPFITFKYHSADGEEGYPG 138
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 503 PGDLITNITYEVTEDNALHVDFMSXXXXXXXXXXXX-HSYFNLAGHETGVQEIYNHIFVI 679
PG + TY +T + +D + H+Y+NLAGH++G I +H I
Sbjct: 137 PGAVSVTATYTLTSATTMRLDMEAVPENKDTPINLAQHTYWNLAGHDSG--NILDHKIQI 194
Query: 680 NADKITETDSGSIPTGGFISVGGTPYD 760
IT D ++PTG + V GTP+D
Sbjct: 195 WGSHITPVDEYTVPTGEILPVKGTPFD 221
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 172 VSVISYGATIQSIQVPDKYGITSDVVLG 255
V + +YG TI S+ VPDK G DVVLG
Sbjct: 21 VKISNYGTTITSLSVPDKNGKLGDVVLG 48
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Frame = +3
Query: 252 GFDELDGYVNRNTPYLGTTVGRCANRIGGAKFSIDGTTYQLANNIGKDHLHGGINGFNKA 431
G+D + Y + Y G TVGR ANRIG KF ++G Y+ + N GK+ LHGG GF
Sbjct: 199 GYDSVKTY-KTDKVYFGATVGRVANRIGKGKFKLNGKEYKTSVNDGKNTLHGGKKGFGDV 257
Query: 432 NW---NSTVDGTK--VIFSYLSKDGEEGYPG 509
W DG K ++F++ S DG++G+PG
Sbjct: 258 VWAVAKHQYDGKKPHIVFTHTSPDGDQGFPG 288
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +2
Query: 503 PGDLITNITYEVTEDNALHVDF-MSXXXXXXXXXXXXHSYFNLAGHETGVQEIYNHIFVI 679
PG+L +TY++ +DN L V HSY+NL GH +G +I + I
Sbjct: 287 PGELSVTVTYKLVKDNELSVVMEAKPKDKATPVNLAHHSYWNLGGHNSG--DILSEEIQI 344
Query: 680 NADKITETDSGSIPTGGFISVGGTPYD 760
T D IPTG V GT YD
Sbjct: 345 LGSGYTPVDGELIPTGKINPVKGTAYD 371
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 169 SVSVISYGATIQSIQVPDKYGITSDVVLG 255
+V ++GA+I S+ PDK G D+VLG
Sbjct: 171 TVKFTNWGASIISLHFPDKNGKMDDIVLG 199
>At3g01260.1 68416.m00032 aldose 1-epimerase family protein similar
to non-cell-autonomous protein pathway2, plasmodesmal
receptor [Nicotiana tabacum] GI:15824567; contains Pfam
profile PF01263: Aldose 1-epimerase
Length = 378
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 506 GDLITNITYEVTEDNALHVDFMSXXXXXXXXXXXXH-SYFNLAGHETGVQEIYNHIFVIN 682
G L +TY++ +N L + + H SY+NL GH ++I++ I
Sbjct: 186 GKLEVTVTYKLVGENRLKMVMQAKAKEKTTPLNLVHRSYWNLGGHNN--EDIFSEEIQIL 243
Query: 683 ADKITETDSGSIPTGGFISVGGTPYD 760
T D PTG ++V GTP+D
Sbjct: 244 GSGYTHLDDNLTPTGKILAVKGTPFD 269
>At3g03880.1 68416.m00401 expressed protein
Length = 193
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 360 TTYQLANNIGKDHLHGGINGFNKANWNSTVDGTKVIFSYLSKDGEEGY 503
TT + +NIGKD L G ING + N ++ K+ + +K+ EE +
Sbjct: 80 TTRGVVDNIGKDCLDGNINGEDSNNKEESM-WPKLFITLSNKEKEEDF 126
>At3g17480.1 68416.m02233 F-box family protein contains F-box domain
Pfam:PF00646
Length = 373
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -1
Query: 688 VSVYNKDMVVDLLDTSFVASQIKIRMVCQIYNGLFSCRR 572
+SV +D+V D+L S +++R C+ +N + + RR
Sbjct: 8 MSVLTEDLVEDILSRVPATSLVRLRSTCKQWNAILNDRR 46
>At2g23000.1 68415.m02743 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 437
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 613 MVCQIYNGLFSCRRHKVDMQGIVLGNFIS 527
+V +I G + C +H +++QG VLGN I+
Sbjct: 184 LVQEISKGNYICCKHLINLQGYVLGNPIT 212
>At3g15030.2 68416.m01902 TCP family transcription factor, putative
similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]
Length = 420
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 133 PSLHDAVQNPQHSKSPCLLFKTNDSSGHKQLRKQSY 26
PS H+ + N H P LL +TN + +L QS+
Sbjct: 198 PSNHNLMHNYHHQHPPDLLSRTNSQNQDLRLSLQSF 233
>At3g15030.1 68416.m01901 TCP family transcription factor, putative
similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]
Length = 420
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 133 PSLHDAVQNPQHSKSPCLLFKTNDSSGHKQLRKQSY 26
PS H+ + N H P LL +TN + +L QS+
Sbjct: 198 PSNHNLMHNYHHQHPPDLLSRTNSQNQDLRLSLQSF 233
>At1g71410.1 68414.m08247 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 909
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +3
Query: 249 SGFDELDGYVN-RNTPYLGTTVGRCANRIGGA-KFSID---GTTYQLANN 383
SGFDELD + N P G +V + G A FS + GT +Q ANN
Sbjct: 748 SGFDELDPFANWPPRPNNGASVASTGLKNGAASNFSNNLPGGTHFQTANN 797
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,384,331
Number of Sequences: 28952
Number of extensions: 386837
Number of successful extensions: 931
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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