Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00176
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   164   6e-43
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.52 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.52 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.69 
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.91 
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.91 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.91 
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.91 
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.91 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  164 bits (399), Expect = 6e-43
 Identities = 78/85 (91%), Positives = 85/85 (100%)
 Frame = +2

Query: 254 TLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 433
           +LT+PS+LDSGKELYIKIIPNKN+GTLTIIDTGIGMTKADLV+NLGTIAKSGTKAFMEAL
Sbjct: 56  SLTNPSRLDSGKELYIKIIPNKNDGTLTIIDTGIGMTKADLVHNLGTIAKSGTKAFMEAL 115

Query: 434 QAGADISMIGQFGVGFYSSYLVADR 508
           QAGADISMIGQFGVGFYS+YLVAD+
Sbjct: 116 QAGADISMIGQFGVGFYSAYLVADK 140



 Score =  128 bits (310), Expect = 4e-32
 Identities = 65/93 (69%), Positives = 71/93 (76%), Gaps = 2/93 (2%)
 Frame = +1

Query: 511 TVHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 690
           TV SK+NDDEQYVWESSAGGSFTV  D GEPLGRGTKIVLH+KED  EF+          
Sbjct: 142 TVVSKNNDDEQYVWESSAGGSFTVTQDRGEPLGRGTKIVLHMKEDQTEFLEEHKIKEIVK 201

Query: 691 XXSQFIGYPIKLMVEKEREKELSD--MKPKKKE 783
             SQFIGYPIKL+VEKEREKELSD   + +KKE
Sbjct: 202 KHSQFIGYPIKLVVEKEREKELSDDEAEEEKKE 234



 Score = 99.1 bits (236), Expect = 3e-23
 Identities = 51/57 (89%), Positives = 52/57 (91%)
 Frame = +3

Query: 84  MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYE 254
           MPEE   Q  +VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYE
Sbjct: 1   MPEE--NQNGDVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYE 55


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -1

Query: 122 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSAKY 6
           F  R+LCL F+ +F Y  +++ ++ +   G   ++ Q A Y
Sbjct: 75  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGY 115


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -1

Query: 122 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSAKY 6
           F  R+LCL F+ +F Y  +++ ++ +   G   ++ Q A Y
Sbjct: 31  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGY 71


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -3

Query: 663 FHEFCQVLFDVKDDLCTSTKGLTAVWADCERASCRR 556
           +H     L + K   C    G    W +C++A+C +
Sbjct: 861 YHPSIVSLGEYKCVTCKCENGKPTCWRECDKATCEK 896


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 574 FTVRPDSGEPLGRGTKIVL 630
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 574 FTVRPDSGEPLGRGTKIVL 630
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 574 FTVRPDSGEPLGRGTKIVL 630
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 574 FTVRPDSGEPLGRGTKIVL 630
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 574 FTVRPDSGEPLGRGTKIVL 630
           FT+ PDSGE L  G  I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 383 CSPNRPWSYQYRYR 342
           C P RPW   Y +R
Sbjct: 522 CDPYRPWQTVYNHR 535


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,267
Number of Sequences: 336
Number of extensions: 4066
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)