Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00176
(788 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 136 2e-32
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 136 2e-32
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 136 2e-32
04_01_0042 + 473912-474058,474208-474349,474442-476264 135 3e-32
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 99 3e-21
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 97 2e-20
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 97 2e-20
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 87 2e-17
06_03_0788 - 24603849-24603949,24604030-24604123,24604206-246044... 31 0.79
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 31 1.4
07_03_1794 - 29580767-29584189 29 3.2
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 29 3.2
08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,304... 29 4.2
04_01_0255 - 3395548-3396129,3396203-3397834 28 7.4
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 28 9.7
05_04_0230 + 19250513-19250633,19250681-19251165 28 9.7
04_04_0699 - 27345243-27346199 28 9.7
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 136 bits (329), Expect = 2e-32
Identities = 65/89 (73%), Positives = 78/89 (87%)
Frame = +2
Query: 254 TLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 433
+LTD SKLD+ EL+I I+P+K TL+IID+GIGMTK+DLVNNLGTIA+SGTK FMEAL
Sbjct: 51 SLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEAL 110
Query: 434 QAGADISMIGQFGVGFYSSYLVADR*LFT 520
AGAD+SMIGQFGVGFYS+YLVA+R + T
Sbjct: 111 AAGADVSMIGQFGVGFYSAYLVAERVVVT 139
Score = 100 bits (239), Expect = 2e-21
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +1
Query: 514 VHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 690
V +KHNDDEQYVWES AGGSFTV D SGE LGRGTKI L++K+D E++
Sbjct: 138 VTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIK 197
Query: 691 XXSQFIGYPIKLMVEKEREKELSDMKPKKKE 783
S+FI YPI L EK EKE+SD + ++++
Sbjct: 198 KHSEFISYPISLWTEKTTEKEISDDEDEEEK 228
Score = 89.0 bits (211), Expect = 4e-18
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +3
Query: 111 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYE 254
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFE 50
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 136 bits (328), Expect = 2e-32
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +2
Query: 254 TLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 433
+LTD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEAL
Sbjct: 51 SLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEAL 110
Query: 434 QAGADISMIGQFGVGFYSSYLVADR*LFT 520
AGAD+SMIGQFGVGFYS+YLVA+R + T
Sbjct: 111 AAGADVSMIGQFGVGFYSAYLVAERVVVT 139
Score = 100 bits (239), Expect = 2e-21
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +1
Query: 514 VHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 690
V +KHNDDEQYVWES AGGSFTV D SGE LGRGTKI L++K+D E++
Sbjct: 138 VTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVK 197
Query: 691 XXSQFIGYPIKLMVEKEREKELSDMKPKKKE 783
S+FI YPI L EK EKE+SD + ++++
Sbjct: 198 KHSEFISYPISLWTEKTTEKEISDDEDEEEK 228
Score = 89.0 bits (211), Expect = 4e-18
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +3
Query: 111 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYE 254
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFE 50
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 136 bits (328), Expect = 2e-32
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +2
Query: 254 TLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 433
+LTD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEAL
Sbjct: 51 SLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEAL 110
Query: 434 QAGADISMIGQFGVGFYSSYLVADR*LFT 520
AGAD+SMIGQFGVGFYS+YLVA+R + T
Sbjct: 111 AAGADVSMIGQFGVGFYSAYLVAERVVVT 139
Score = 100 bits (239), Expect = 2e-21
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +1
Query: 514 VHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 690
V +KHNDDEQYVWES AGGSFTV D SGE LGRGTKI L++K+D E++
Sbjct: 138 VTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVK 197
Query: 691 XXSQFIGYPIKLMVEKEREKELSDMKPKKKE 783
S+FI YPI L EK EKE+SD + ++++
Sbjct: 198 KHSEFISYPISLWTEKTTEKEISDDEDEEEK 228
Score = 89.0 bits (211), Expect = 4e-18
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +3
Query: 111 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYE 254
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFE 50
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 135 bits (327), Expect = 3e-32
Identities = 63/89 (70%), Positives = 79/89 (88%)
Frame = +2
Query: 254 TLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 433
+LTD SKLD+ EL+I+++P K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEAL
Sbjct: 58 SLTDKSKLDAQPELFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEAL 117
Query: 434 QAGADISMIGQFGVGFYSSYLVADR*LFT 520
QAGAD+SMIGQFGVGFYS+YLVA++ + T
Sbjct: 118 QAGADVSMIGQFGVGFYSAYLVAEKVVVT 146
Score = 95.1 bits (226), Expect = 6e-20
Identities = 48/84 (57%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +1
Query: 514 VHSKHNDDEQYVWESSAGGSFTVRPDS-GEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 690
V +KHNDDEQYVWES AGGSFTV D+ GE LGRGTKI L +K+D E++
Sbjct: 145 VTTKHNDDEQYVWESQAGGSFTVTLDTAGERLGRGTKITLFLKDDQLEYLEERRLKDLVK 204
Query: 691 XXSQFIGYPIKLMVEKEREKELSD 762
S+FI YPI L EK EKE+SD
Sbjct: 205 KHSEFISYPIYLWSEKTTEKEISD 228
Score = 91.5 bits (217), Expect = 7e-19
Identities = 45/52 (86%), Positives = 48/52 (92%)
Frame = +3
Query: 99 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYE 254
+ Q AE ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E
Sbjct: 6 DVQMAEKETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFE 57
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 99.1 bits (236), Expect = 3e-21
Identities = 51/85 (60%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 LTDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEA 430
LTD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT AF+E
Sbjct: 151 LTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEK 210
Query: 431 LQAGADISMIGQFGVGFYSSYLVAD 505
+Q G D+++IGQFGVGFYS YLVAD
Sbjct: 211 MQTGGDLNLIGQFGVGFYSVYLVAD 235
Score = 77.0 bits (181), Expect = 2e-14
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 514 VHSKHNDDEQYVWESSAGGSFTVRPDS-GEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 690
V SKHNDD+Q+VWES A GSF + D+ EPLGRGT+I LH++++ E++
Sbjct: 239 VISKHNDDKQHVWESKADGSFAISEDTWNEPLGRGTEIRLHLRDEAKEYVEEDKLKDLVK 298
Query: 691 XXSQFIGYPIKLMVEKEREKEL 756
S+FI +PI L KE + E+
Sbjct: 299 KYSEFINFPIYLWATKEVDVEV 320
Score = 72.9 bits (171), Expect = 3e-13
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = +3
Query: 99 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 251
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+
Sbjct: 98 KTLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRF 148
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 96.7 bits (230), Expect = 2e-20
Identities = 47/89 (52%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Frame = +2
Query: 254 TLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 433
++TDP + G L I+I +K G +TI DTGIGMT+ +LV++LGTIA SGT F++AL
Sbjct: 398 SVTDPDLIKDGAGLDIRIQTDKENGIITITDTGIGMTRQELVDSLGTIASSGTAKFLKAL 457
Query: 434 ----QAGADISMIGQFGVGFYSSYLVADR 508
+AG D ++IGQFGVGFYS++LV+D+
Sbjct: 458 KESQEAGVDSNLIGQFGVGFYSAFLVSDK 486
Score = 68.1 bits (159), Expect = 7e-12
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +3
Query: 90 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 251
+ +T P VE +QAE+ +LM LI+++ YSNKE+FLREL+SN+SDALDK+RY
Sbjct: 345 DSSDTPP--VEKHEYQAEVNRLMDLIVHSLYSNKEVFLRELVSNASDALDKLRY 396
Score = 48.4 bits (110), Expect = 6e-06
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +1
Query: 535 DEQYVWESSA-GGSFTVRP--DSGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXXXXSQF 705
D+QYVWE A S+T+R D + L RGT++ L++K + F SQF
Sbjct: 497 DKQYVWEGEAESSSYTIREETDPEKLLPRGTRLTLYLKREDKGFAHPEKIQKLVKNYSQF 556
Query: 706 IGYPIKLMVEKEREKELSDMKP-KKKEG 786
+ +PI EK KE+ +P + KEG
Sbjct: 557 VSFPIYTWQEKGYTKEVEVDEPVEAKEG 584
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 96.7 bits (230), Expect = 2e-20
Identities = 50/88 (56%), Positives = 66/88 (75%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 LTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ 436
+TD S L G EL I+I P+ + GT+TI DTGIGMTK +L + LGTIA+SGT F++AL+
Sbjct: 388 VTDSSLLADGGELEIRIKPDPDAGTITITDTGIGMTKDELKDCLGTIAQSGTSKFLKALK 447
Query: 437 ----AGADISMIGQFGVGFYSSYLVADR 508
GAD +IGQFGVGFYS++LVA++
Sbjct: 448 ENKDLGADNGLIGQFGVGFYSAFLVAEK 475
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/53 (56%), Positives = 44/53 (83%)
Frame = +3
Query: 93 EMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 251
E + AE E F +QAE+++LM LI+++ YS+KE+FLREL+SN+SDALDK+R+
Sbjct: 333 EKAEETAEEEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRF 385
Score = 44.8 bits (101), Expect = 8e-05
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +1
Query: 535 DEQYVWESSAGGSFTVRPDSGEP---LGRGTKIVLHVK-EDLAEFMXXXXXXXXXXXXSQ 702
D+QYVWE A S V + +P L RGT+I L ++ +D EF SQ
Sbjct: 486 DKQYVWEGVADSSSYVIKEETDPEKMLTRGTQITLVLRPDDKFEFADPGRIQGLVKNYSQ 545
Query: 703 FIGYPIKLMVEKEREKELSDMKPKKKEG 786
F+ +PI EK R E+ + + KEG
Sbjct: 546 FVSFPIYTWQEKSRTVEVEE-DEEAKEG 572
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 86.6 bits (205), Expect = 2e-17
Identities = 50/98 (51%), Positives = 66/98 (67%), Gaps = 13/98 (13%)
Frame = +2
Query: 254 TLTDPSKLDSGKELYIKIIPNKNEGTLTII---------DTGIGMTKADLVNNLGTIAKS 406
++TD S L G EL I+I P+ GT+TI DTGIGMTK +L + LGTIA+S
Sbjct: 128 SVTDSSVLSDGGELEIRIKPDPEAGTITITRSHCFASYSDTGIGMTKDELKDCLGTIAQS 187
Query: 407 GTKAFMEALQ----AGADISMIGQFGVGFYSSYLVADR 508
GT F++AL+ GAD +IGQFGVGFYS++LVA++
Sbjct: 188 GTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLVAEK 225
Score = 65.7 bits (153), Expect = 4e-11
Identities = 27/49 (55%), Positives = 42/49 (85%)
Frame = +3
Query: 105 QPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 251
+ A E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDALDK+R+
Sbjct: 78 EEAAGEQFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRF 126
Score = 51.2 bits (117), Expect = 9e-07
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 535 DEQYVWESSAGGSFTVRPDSGEP---LGRGTKIVLHVKED-LAEFMXXXXXXXXXXXXSQ 702
D+QYVWE+ A S V + +P L RGT+I L +++D EF SQ
Sbjct: 236 DKQYVWEAMADSSSYVIKEETDPEKMLTRGTQITLFLRDDDKYEFADPGRIQGLVKNYSQ 295
Query: 703 FIGYPIKLMVEKEREKELSDMKPKKKE 783
F+ +PI EK R E+ + +PK+ E
Sbjct: 296 FVSFPIYTWQEKSRTVEVEEEEPKEGE 322
>06_03_0788 -
24603849-24603949,24604030-24604123,24604206-24604413,
24604727-24604839,24605679-24605816,24605916-24605999,
24606517-24606675,24606754-24606837,24607505-24607840,
24607941-24608042,24608970-24609153,24609699-24610044,
24610444-24610591,24611053-24611203,24611786-24611867,
24612314-24612362
Length = 792
Score = 31.5 bits (68), Expect = 0.79
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 263 DPSKLD-SGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 439
D S+L+ S K L+ K +K L++ID G GMT A+++ + K K +
Sbjct: 256 DASRLNISVKSLFSKKA-DKKIPVLSVIDDGHGMTCAEMMRMISFGHKRPDKQRQD---- 310
Query: 440 GADISMIGQFGVGFYSSYLVADR*LFTLNTMTTSNTCGNLLQEARSQSAQTAVSPLVEVQ 619
IG+FG+GF + + R L T T+S+ L ++ +++ P+V +
Sbjct: 311 -----QIGRFGIGFKTGAMKLGRDAIVL-TQTSSSRSVAFLSQSFNENKDNLEIPVVTYR 364
Query: 620 R 622
+
Sbjct: 365 K 365
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 30.7 bits (66), Expect = 1.4
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Frame = +2
Query: 341 IDTGIGMTKADLVNNLGT----IAKSGTKAFMEALQAG-ADISMIGQFGVGFYSSYLVA- 502
++ GM+ A+L+ + I +SGTK E L+AG + ++G+ GVG + L A
Sbjct: 100 VECAYGMSPAELLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVGIDNVDLQAA 159
Query: 503 -DR*LFTLNTMTTSNTC----GNLLQEARSQSAQTAVSPLVEVQRSSFTSKRTWQNSWKN 667
+ +N T + G L + +++ A + L V + T T Q W+
Sbjct: 160 TEAGCLVVNAPTANTVAAAEHGIALLASMARNVSQADAALKAVYSRTLT-VFTAQGKWQR 218
Query: 668 TK 673
TK
Sbjct: 219 TK 220
>07_03_1794 - 29580767-29584189
Length = 1140
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 9/56 (16%)
Frame = +3
Query: 201 LRELISNSSDALDKIR--YELSRIRQNSIVAKSCTSRS-------FPTRTRALLRS 341
+REL +D L K+R ++LS R++S+V + +S S FPTRTR LR+
Sbjct: 1059 MRELEGKVNDGLQKLRESFDLS-CRRSSLVEEESSSTSYHSQFKHFPTRTRVPLRN 1113
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +1
Query: 289 RAVHQDHSQQERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQH 456
RA + + H +DHR+R+ G G+H +HGG R RH H
Sbjct: 525 RARRRHQKGRHHRHHHDHRHRH-------GHSHGDHHH----HYHGGHHQRRRHHH 569
>08_01_0344 +
3043824-3044123,3044260-3044314,3044810-3044985,
3045083-3045283,3045383-3045642,3045909-3046222,
3046399-3046622,3047046-3047398,3047709-3047826,
3047875-3048133,3048252-3049729
Length = 1245
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 177 FYSNKEIFLRELISNSSDALDKIRYELSRIRQNSIVAKSCTSRSFPTR 320
FY + I +EL+S +S+A IR S + ++ I+ K+ S P R
Sbjct: 841 FYGDSAIAHQELVSLASEAASNIRTVASFVYEDEIIKKAELSLQEPMR 888
>04_01_0255 - 3395548-3396129,3396203-3397834
Length = 737
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 703 FIGYPIKLMVEKEREKELSDMKPKKKEG 786
++ YP++ + EK++EKE + K KKK+G
Sbjct: 451 YLAYPVEDVEEKKKEKE--EKKKKKKKG 476
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 559 SAGGSFTVRPDSGEPLGRGTK 621
SA G+ RP + PLGRGT+
Sbjct: 19 SAAGAVVGRPSTARPLGRGTR 39
>05_04_0230 + 19250513-19250633,19250681-19251165
Length = 201
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 606 WSRYKDRPSRQRGLGRIHGRTQNQRDR 686
W R + RP+ G G GR Q +RDR
Sbjct: 163 WRRERGRPAAGAGSGGSGGRWQRERDR 189
>04_04_0699 - 27345243-27346199
Length = 318
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 566 PAEDSHTYCSSSLCLE*TVSGQRPSNWSRSQHRTVQSC*CRHL--LEEPP*KL*YQISRW 393
PA ++ SSS C T S S+ S + + ++ L PP +L + + W
Sbjct: 238 PATSESSFSSSSSCTTTTTSSSTSSSGSPKRRKRGEAAAASMSMPLVPPPSQLNWPVQAW 297
Query: 392 FPNCSP 375
+P +P
Sbjct: 298 YPAAAP 303
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,467,970
Number of Sequences: 37544
Number of extensions: 486885
Number of successful extensions: 1236
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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