Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00176
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 154 6e-38
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 92 4e-19
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 84 1e-16
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 84 1e-16
AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 84 1e-16
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 31 1.2
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 31 1.2
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 1.6
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 30 2.2
AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde dehy... 29 5.0
Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical pr... 28 8.8
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 154 bits (374), Expect = 6e-38
Identities = 74/88 (84%), Positives = 83/88 (94%)
Frame = +2
Query: 257 LTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ 436
LT+PS+LD+GKEL+IKI PNK E TLTI+DTGIGMTKADLVNNLGTIAKSGTKAFMEALQ
Sbjct: 52 LTEPSELDTGKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ 111
Query: 437 AGADISMIGQFGVGFYSSYLVADR*LFT 520
AGADISMIGQFGVGFYS++LVAD+ + T
Sbjct: 112 AGADISMIGQFGVGFYSAFLVADKVVVT 139
Score = 104 bits (249), Expect = 8e-23
Identities = 49/83 (59%), Positives = 59/83 (71%)
Frame = +1
Query: 514 VHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXXX 693
V SK+NDD+ Y WESSAGGSF VRP + + RGTKIV+H+KED +F+
Sbjct: 138 VTSKNNDDDSYQWESSAGGSFVVRPFNDPEVTRGTKIVMHIKEDQIDFLEERKIKEIVKK 197
Query: 694 XSQFIGYPIKLMVEKEREKELSD 762
SQFIGYPIKL+VEKEREKE+ D
Sbjct: 198 HSQFIGYPIKLVVEKEREKEVED 220
Score = 88.2 bits (209), Expect = 6e-18
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = +3
Query: 120 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYE 254
ETFAFQAEIAQLMSLIINTFYSNKEI+LRELISN+SDALDKIRY+
Sbjct: 6 ETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQ 50
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 92.3 bits (219), Expect = 4e-19
Identities = 53/122 (43%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Frame = +2
Query: 254 TLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 433
+LTDP +L +E+ +KI ++ L I DTG+GMT+ DL+NNLGTIA+SGT F+ L
Sbjct: 107 SLTDPEQLRETEEMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSEFLSKL 166
Query: 434 QAGADIS-----MIGQFGVGFYSSYLVADR*LFTLNTMTTSNTCGNLLQEARSQSAQTAV 598
A S +IGQFGVGFY+++LVADR + T T +N + E+ S S +
Sbjct: 167 MDTATSSDQQQDLIGQFGVGFYAAFLVADRVVVT----TKNNDDDQYIWESDSASFTISK 222
Query: 599 SP 604
P
Sbjct: 223 DP 224
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +3
Query: 111 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIR 248
++ E FQAE+ ++M LIIN+ Y NKEIFLRELISN+SDALDKIR
Sbjct: 59 SKAEKHEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIR 104
Score = 62.1 bits (144), Expect = 4e-10
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +1
Query: 514 VHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 690
V +K+NDD+QY+WES + SFT+ D G L RGT+I L++KE+ A+F+
Sbjct: 199 VTTKNNDDDQYIWESDS-ASFTISKDPRGNTLKRGTQITLYLKEEAADFLEPDTLKNLVH 257
Query: 691 XXSQFIGYPIKLMVEK-EREKELSDMKPKKKE 783
SQFI + I L K E +E + +P E
Sbjct: 258 KYSQFINFDIFLWQSKTEMVEEAVEEEPATTE 289
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 83.8 bits (198), Expect = 1e-16
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +2
Query: 299 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 478
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 479 FYSSYLVADR*LFTLNTMTTSNTCG 553
FYS+++VAD + T + +S+ G
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADG 183
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 84 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 251
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRY 86
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 83.8 bits (198), Expect = 1e-16
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +2
Query: 299 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 478
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 479 FYSSYLVADR*LFTLNTMTTSNTCG 553
FYS+++VAD + T + +S+ G
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADG 183
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 84 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 251
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRY 86
>AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 222
Score = 83.8 bits (198), Expect = 1e-16
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +2
Query: 299 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 478
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 479 FYSSYLVADR*LFTLNTMTTSNTCG 553
FYS+++VAD + T + +S+ G
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADG 183
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 84 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 251
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRY 86
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 298 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 459
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 376 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 423
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 298 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 459
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 394 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 441
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect(2) = 1.6
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +1
Query: 319 ERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 459
+ GH++DH + + +D G + G+ + HG + H H+
Sbjct: 77 DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHE 123
Score = 20.6 bits (41), Expect(2) = 1.6
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = +1
Query: 286 QRAVHQDHSQQERGHSYDH 342
Q HQ H GH + H
Sbjct: 36 QNVHHQGHGHAHGGHGHAH 54
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 313 QQERGHSYDHRYRYWYDQGRFGEQFGN 393
+Q+ H YD RY YD + E +GN
Sbjct: 48 KQQEAHHYDDRYNNTYDNYDYEEDYGN 74
>AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde
dehydrogenase protein 5 protein.
Length = 437
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = -2
Query: 547 RIARRHCV*SEQSAVSDQVTGVEANTELSNHADVGTCLKSLHESFSTRFRDGSQIVHQIG 368
RIAR + Q+ ++ V + T+ A + CLK + + +D S++++Q
Sbjct: 231 RIARGKWLNCGQTCLAPDYILVSSATKPKFVAAIQKCLKEFYGGNAKESKDYSRVINQRH 290
Query: 367 LGHTNTGIDDRKSALVLVGND 305
+ +D+ K +VL GN+
Sbjct: 291 FDRISALLDESK-GVVLAGNE 310
>Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical
protein C53D6.6 protein.
Length = 615
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 430 SLHESFSTRFRDGSQIVHQIGLGHTNTGIDDRKSALVL 317
SLH + R R+ + V +GLG + DDRK+ V+
Sbjct: 155 SLHFKYEQRLREELRNVEYVGLGCYSWNKDDRKNEQVV 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,057,564
Number of Sequences: 27780
Number of extensions: 403851
Number of successful extensions: 1199
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -