Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00172
(794 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49734| Best HMM Match : SapB_2 (HMM E-Value=0) 55 8e-08
SB_47698| Best HMM Match : SapB_2 (HMM E-Value=1.5e-06) 47 2e-05
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_53315| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_10103| Best HMM Match : SapB_2 (HMM E-Value=2.6e-12) 35 0.066
SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13) 33 0.20
SB_42855| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_11638| Best HMM Match : Kinesin (HMM E-Value=5.5e-10) 30 2.5
SB_16580| Best HMM Match : VHS (HMM E-Value=7.6) 29 3.3
SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5) 29 3.3
SB_14572| Best HMM Match : ANF_receptor (HMM E-Value=6.7e-18) 29 3.3
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_42375| Best HMM Match : Borrelia_orfA (HMM E-Value=2.2) 29 5.7
SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) 29 5.7
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_41099| Best HMM Match : VWA (HMM E-Value=0) 28 7.6
SB_40275| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.6
SB_15617| Best HMM Match : Glycoprotein_G (HMM E-Value=4.8) 28 7.6
>SB_49734| Best HMM Match : SapB_2 (HMM E-Value=0)
Length = 457
Score = 54.8 bits (126), Expect = 8e-08
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 271 EIKKAVHGICKHMPKSVSAECDQFVEKYADLVISLLAQELDPSEVCEELKLC 426
EI +AV +C +P ++ ++CDQFV++Y +I +L QE+ P VC L LC
Sbjct: 241 EIIQAVEKVCSILPSTIKSKCDQFVQEYGPALIEILEQEVSPKLVCTTLGLC 292
Score = 52.4 bits (120), Expect = 4e-07
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +3
Query: 516 LKNEKLDRNIVHIIEKSCGLLPAKYNAQCYAMLEVYGESIIHLIEEFGAKGVCQRIGFCG 695
L N D IV+ +EK C LP++ ++C A++ YG +++ +I +C+ IG C
Sbjct: 329 LNNNATDEEIVNFLEKVCNYLPSQIASECNAIVSEYGSTVLQIIANTDPTTLCKEIGLCS 388
Query: 696 RTENRIRAHV 725
++ ++A +
Sbjct: 389 ANQHVMKAKI 398
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 507 EKVLKNEKLDRNIVHIIEKSCGLLPAKYNAQCYAMLEVYGESIIHLIE-EFGAKGVCQRI 683
+ +L + I+ +EK C +LP+ ++C ++ YG ++I ++E E K VC +
Sbjct: 230 DDMLSKNSTQQEIIQAVEKVCSILPSTIKSKCDQFVQEYGPALIEILEQEVSPKLVCTTL 289
Query: 684 GFCGRTENRI 713
G C E+RI
Sbjct: 290 GLCANREHRI 299
Score = 48.0 bits (109), Expect = 9e-06
Identities = 17/54 (31%), Positives = 34/54 (62%)
Frame = +1
Query: 265 DDEIKKAVHGICKHMPKSVSAECDQFVEKYADLVISLLAQELDPSEVCEELKLC 426
D+EI + +C ++P +++EC+ V +Y V+ ++A DP+ +C+E+ LC
Sbjct: 335 DEEIVNFLEKVCNYLPSQIASECNAIVSEYGSTVLQIIA-NTDPTTLCKEIGLC 387
Score = 35.9 bits (79), Expect = 0.038
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 197 SNVCVLCEFVLKEIDDQIKANIT 265
S CVLCEFV+KE+DD + N T
Sbjct: 216 STECVLCEFVMKELDDMLSKNST 238
Score = 35.5 bits (78), Expect = 0.050
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 268 DEIKKAVHGICKHMPKSVSAECDQFVEKYADLVISLLAQEL-DPSEVCEELKLC 426
++I + C + S EC VE Y +I L+ +L +P +VC+E+ LC
Sbjct: 46 NQILSLIKDACTFLGPEAS-ECKSLVETYGKAIIQLILSQLSNPDQVCKEIGLC 98
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +3
Query: 543 IVHIIEKSCGLLPAKYNAQCYAMLEVYGESIIHLI--EEFGAKGVCQRIGFC-GRTE 704
I+ +I+ +C L + + +C +++E YG++II LI + VC+ IG C +TE
Sbjct: 48 ILSLIKDACTFLGPEAS-ECKSLVETYGKAIIQLILSQLSNPDQVCKEIGLCTSKTE 103
>SB_47698| Best HMM Match : SapB_2 (HMM E-Value=1.5e-06)
Length = 175
Score = 47.2 bits (107), Expect = 2e-05
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +3
Query: 543 IVHIIEKSCGLLPAKYNAQCYAMLEVYGESIIHLIEEFGAKGVCQRIGFCGRTENRIRAH 722
IV+ +EK C LP++ ++C A++ YG +++ +I +C+ IG C ++ ++A
Sbjct: 3 IVNFLEKVCNYLPSQIASECNAIVSEYGSTVLQIIANTDPTTLCKEIGLCSANQHLMKAK 62
Query: 723 V 725
+
Sbjct: 63 I 63
Score = 45.6 bits (103), Expect = 5e-05
Identities = 16/53 (30%), Positives = 33/53 (62%)
Frame = +1
Query: 268 DEIKKAVHGICKHMPKSVSAECDQFVEKYADLVISLLAQELDPSEVCEELKLC 426
+EI + +C ++P +++EC+ V +Y V+ ++A DP+ +C+E+ LC
Sbjct: 1 EEIVNFLEKVCNYLPSQIASECNAIVSEYGSTVLQIIA-NTDPTTLCKEIGLC 52
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 322 SAECDQFVEKYADLVISLLAQELDPSEVCEELKLC 426
S +C FV++Y +I +L++E P VC ELKLC
Sbjct: 623 STKCKTFVQEYTPFIIEILSKEFKPELVCRELKLC 657
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 164 VNGRRVSHK---SQSNVCVLCEFVLKEIDDQIKANITTTKS 277
V R+ HK S CV+CEFV++E+ + N T K+
Sbjct: 588 VPSRKPVHKLMIKTSETCVMCEFVMRELSKMLNENSTKCKT 628
>SB_53315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 322 SAECDQFVEKYADLVISLLAQELDPSEVCEELKLC 426
S +C FV Y + V+ +L+QEL+P VC L LC
Sbjct: 111 STQCASFVNTYEEEVLKILSQELNPDMVCTSLGLC 145
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +2
Query: 206 CVLCEFVLKEIDDQIKANIT-TTKSRKL 286
C LCEFV++++D+++K N T TK +L
Sbjct: 266 CALCEFVMEKLDNELKDNATEVTKYNQL 293
>SB_10103| Best HMM Match : SapB_2 (HMM E-Value=2.6e-12)
Length = 105
Score = 35.1 bits (77), Expect = 0.066
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 268 DEIKKAVHGICKHMPKSVSAECDQFVEKYADLVISLLAQEL-DPSEVCEELKLC 426
++I + C + S EC VE Y +I L+ +L +P +VC+E+ LC
Sbjct: 34 NQILSLIKDACTFLGPEAS-ECRSLVETYGKAIIQLILSQLSNPDQVCKEIGLC 86
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +3
Query: 543 IVHIIEKSCGLLPAKYNAQCYAMLEVYGESIIHLI--EEFGAKGVCQRIGFC-GRTE 704
I+ +I+ +C L + + +C +++E YG++II LI + VC+ IG C +TE
Sbjct: 36 ILSLIKDACTFLGPEAS-ECRSLVETYGKAIIQLILSQLSNPDQVCKEIGLCTSKTE 91
>SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13)
Length = 492
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 256 KHNDDEIKKAVHGICKHMPKSVSAECDQFVEKYADLVISLLAQEL-DPSEVCEELKLCKP 432
K + ++K + IC + EC + V+ Y ++IS L L +P +VC L LC
Sbjct: 414 KSMEGKVKAILDEICDKDGGFFAGECKKVVDTYFTMIISQLDIILQNPKQVCTTLGLCSA 473
Query: 433 ES 438
E+
Sbjct: 474 EA 475
>SB_42855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 537 RNIVHIIEKSCGLLPAKYNAQCYAMLEVYGESIIHLIEEFGAKGVCQ 677
R+I+ ++ + C P +MLEVY E++ L+EEFG+ G Q
Sbjct: 585 RSILELL-RVCNERPNVDYTLSLSMLEVYNETLKDLLEEFGSGGGTQ 630
>SB_11638| Best HMM Match : Kinesin (HMM E-Value=5.5e-10)
Length = 208
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 537 RNIVHIIEKSCGLLPAKYNAQCYAMLEVYGESIIHLIEEFGA 662
R+I+ ++ + C P AMLEVY E++ L+EEFG+
Sbjct: 12 RSILELL-RVCNERPNVDYTLSLAMLEVYNETLKDLLEEFGS 52
>SB_16580| Best HMM Match : VHS (HMM E-Value=7.6)
Length = 264
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 533 RPQHRAHHREVVWTFARQIQRSVLRNAG 616
R +H + + VWT A + RS+ RN G
Sbjct: 82 RDEHAGYAYDAVWTMALALNRSIARNPG 109
>SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5)
Length = 260
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 464 TSSTAPSARQW*WP*EGPQKREARPQHRAHHREVVWTFARQIQRSVLRNAGGLR*KHHSP 643
TSST+PSA + Q R +H HH ++ ++ S+ + R +HH
Sbjct: 42 TSSTSPSASVYSVSSASLQHLHQRHRHHQHHHQLQYSVYSVSSASLQHHHQRQRHRHHQH 101
Query: 644 HRRV 655
H ++
Sbjct: 102 HHQL 105
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 464 TSSTAPSARQW*WP*EGPQKREARPQHRAHHREVVWTFARQIQRSVL 604
TSST+PSA + Q R +HR HH ++ + Q S++
Sbjct: 149 TSSTSPSASVYSVSSSSLQHHHQRHRHRQHHHQLQYIQCHQHHYSII 195
>SB_14572| Best HMM Match : ANF_receptor (HMM E-Value=6.7e-18)
Length = 808
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 533 RPQHRAHHREVVWTFARQIQRSVLRNAG 616
R +H + + VWT A + RS+ RN G
Sbjct: 602 RDEHAGYAYDAVWTMALALNRSIARNPG 629
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = -1
Query: 200 CSETCARRGDRSPCRPGSRSFRRH*IQKPACVWAEATSSCGCSCRLSMCASRGTC 36
CS CA + S C GS C T CG C+ +C++ G C
Sbjct: 188 CSFNCAAQTCESSCAHGS-------CPNMTCGGTNCTQKCGKDCQQVVCSASGKC 235
>SB_42375| Best HMM Match : Borrelia_orfA (HMM E-Value=2.2)
Length = 475
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 92 SLLPKHMLVSEFSDVETNEILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKANI 262
SL+ K + + FSD++ NE DD + S++++ + LK+ DD+ N+
Sbjct: 214 SLIDKRIAGAHFSDLDRNEPPDDLPHEECKSYENEGKENDKYDLNLKKSDDKADLNL 270
>SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)
Length = 2232
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 672 CQRIGFCGRTENRIRAHVPREEELTRTC 755
CQR CG E I H+PR+E C
Sbjct: 419 CQRYHKCGTCEKLIDMHLPRKEGKEHVC 446
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = -1
Query: 200 CSETCARRGDRSPCRPGSRSFRRH*IQKPACVWAEATSSCGCS-----CRLSMCASRGTC 36
CSE D +PC G+ + I ACV S CS CR + C + GTC
Sbjct: 2239 CSENI-NECDPNPCLNGATCLDK--IADYACVCPSGYSGINCSVNVNDCRTNPCENGGTC 2295
Query: 35 L 33
+
Sbjct: 2296 I 2296
>SB_41099| Best HMM Match : VWA (HMM E-Value=0)
Length = 3373
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 688 FVVGPKTAYVRMYREKRN*RVPVPS-QYKYR 777
++VGP+T +VR K + RVPV + ++ YR
Sbjct: 1074 WMVGPRTLFVRFVTRKGSFRVPVTTKRFNYR 1104
>SB_40275| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1747
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -1
Query: 206 RRCSETCARRGDRSPCRPGSRSFRRH*IQKPACVWAEATSSCGCSCRLSMCASRGTCL 33
RR S T + GD C G+ + P+ GC C + CA+ GTC+
Sbjct: 1475 RRASGTVSVLGDFGGCIAGTSVNGANMESDPSIKVHRQNVLDGCPCLSNFCANGGTCV 1532
>SB_15617| Best HMM Match : Glycoprotein_G (HMM E-Value=4.8)
Length = 554
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 244 PNKSKHNDDEIKKAVHGICKHMPKSVSAECDQFVEKYADLVISLLAQ 384
P+K K+ D+IK AV P+S+ ECD V ++ SLL++
Sbjct: 248 PSKPKNTSDDIKFAV-------PESMEFECDSSVREHGGKGSSLLSE 287
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,931,006
Number of Sequences: 59808
Number of extensions: 494943
Number of successful extensions: 1753
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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