Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00172
(794 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g11910.1 68414.m01374 aspartyl protease family protein contai... 36 0.031
At1g62290.1 68414.m07027 aspartyl protease family protein contai... 36 0.041
At4g04460.1 68417.m00648 aspartyl protease family protein contai... 35 0.072
At5g27430.1 68418.m03274 signal peptidase subunit family protein... 29 2.7
At3g51730.1 68416.m05672 saposin B domain-containing protein con... 29 2.7
At5g62680.1 68418.m07866 proton-dependent oligopeptide transport... 29 4.7
At1g18480.1 68414.m02306 calcineurin-like phosphoesterase family... 28 6.2
At5g39500.1 68418.m04783 pattern formation protein, putative sim... 28 8.2
At3g05230.1 68416.m00571 signal peptidase subunit family protein... 28 8.2
At2g46180.1 68415.m05742 intracellular protein transport protein... 28 8.2
At1g67640.1 68414.m07716 lysine and histidine specific transport... 28 8.2
>At1g11910.1 68414.m01374 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 506
Score = 35.9 bits (79), Expect = 0.031
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 319 VSAECDQFVEKYADLVISLLAQELDPSEVCEELKLC 426
VS +C V++Y ++ LL E P ++C ++ LC
Sbjct: 313 VSQQCKTVVDQYGQTILDLLLSETQPKKICSQIGLC 348
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 597 QCYAMLEVYGESIIH-LIEEFGAKGVCQRIGFC 692
QC +++ YG++I+ L+ E K +C +IG C
Sbjct: 316 QCKTVVDQYGQTILDLLLSETQPKKICSQIGLC 348
>At1g62290.1 68414.m07027 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 513
Score = 35.5 bits (78), Expect = 0.041
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 319 VSAECDQFVEKYADLVISLLAQELDPSEVCEELKLC 426
VS +C V++Y ++ LL E P ++C ++ LC
Sbjct: 320 VSQQCKTVVDQYGQTILDLLLAETQPKKICSQIGLC 355
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 543 IVHIIEKSCGLLPAKYNAQCYAMLEVYGESIIH-LIEEFGAKGVCQRIGFC 692
+V +I K+ G + QC +++ YG++I+ L+ E K +C +IG C
Sbjct: 306 VVAMINKAIGA-SGVVSQQCKTVVDQYGQTILDLLLAETQPKKICSQIGLC 355
>At4g04460.1 68417.m00648 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 508
Score = 34.7 bits (76), Expect = 0.072
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 319 VSAECDQFVEKYADLVI-SLLAQELDPSEVCEELKLC 426
VS EC V++Y ++ SLLAQE DP +VC ++ +C
Sbjct: 318 VSRECKAVVDQYGKTMLNSLLAQE-DPKKVCSQIGVC 353
>At5g27430.1 68418.m03274 signal peptidase subunit family protein
contains Pfam profile: PF04573 signal peptidase subunit
Length = 167
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 309 HVFAYAVNSFLDFVVVMFAFIWSSISFRTN 220
H F Y N+ L F V + AFI + SF N
Sbjct: 2 HSFGYRANALLTFAVTILAFICAIASFSDN 31
>At3g51730.1 68416.m05672 saposin B domain-containing protein
contains Pfam profiles: PF00026 eukaryotic aspartyl
protease, PF03489 surfactant protein B, PF05184
saposin-like type B, region 1
Length = 213
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 268 DEIKKAVHGICKHMPKSVSAECDQFVEKYADLVISLLAQELDPSEVCEELKLCKPE 435
D ++ + G CK + K+ +C V +Y L++ + L ++VC L+ C PE
Sbjct: 148 DIVELLIKG-CKSL-KNYEKKCKTLVFEYGPLILVNAEEFLVKNDVCTLLRACPPE 201
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +3
Query: 516 LKNEKLDRNIVHIIEKSCGLLPAKYNAQCYAMLEVYGESIIHLIEEFGAKGVCQRIGFCG 695
L+ I+ + C L Y+ QC ++++ Y +E F C+R+ CG
Sbjct: 54 LEKNVTQAEIIEDLHDRCSQLRG-YSQQCISLVDYYVPLFFLQLESFQPHYFCKRMNLCG 112
Query: 696 R 698
+
Sbjct: 113 K 113
>At5g62680.1 68418.m07866 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 616
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 102 GRSDFFLWLFLSPLNVRFAWNLSMDEWVSLRGS 4
GR D F ++ L V FA+ L M W +GS
Sbjct: 562 GRLDLFYFMIAGILAVNFAYFLVMSRWYRYKGS 594
>At1g18480.1 68414.m02306 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 391
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 292 GICKHMPKSVSAECDQFVEKYADLVISLLAQELDPSEVCE--ELKLCKPE 435
GICK +PK +S+ FV+ + D +S + DPS E + + KPE
Sbjct: 9 GICKSIPKLISS----FVDTFVDYSVSGIFLPQDPSSQNEILQTRFEKPE 54
>At5g39500.1 68418.m04783 pattern formation protein, putative
similar to SP|Q42510 Pattern formation protein EMB30
{Arabidopsis thaliana}; contains Pfam profile PF01369:
Sec7 domain
Length = 1443
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = -2
Query: 205 DVALRLVRDAATVHRVVQDLVRFDVTEFRNQHVFGQKRLLPVVVPVASQCALRVELVYGR 26
+ LR+V +++ ++Q + R + E + +F Q LP + P+A++C L V+ G
Sbjct: 189 NTCLRVVHQSSSKSELLQRIARHTMHELI-RCIFSQ---LPFISPLANECELHVDNKVGT 244
Query: 25 V 23
V
Sbjct: 245 V 245
>At3g05230.1 68416.m00571 signal peptidase subunit family protein
contains Pfam profile: PF04573 signal peptidase subunit
Length = 167
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 309 HVFAYAVNSFLDFVVVMFAFIWSSISF 229
H F Y N+ L F V AFI + SF
Sbjct: 2 HTFGYRANALLTFAVTALAFICAIASF 28
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/91 (24%), Positives = 41/91 (45%)
Frame = +1
Query: 142 ERDPGRHGERSPRLAQVSEQRLCSLRIRPEGNRRPNKSKHNDDEIKKAVHGICKHMPKSV 321
+ P R +RSP + Q + +P G ++S + E + + + M +
Sbjct: 144 DHSPNR-SQRSPTNWKNRNQMNNGIASKPNGTENDSESHKKEKEFAEMLEERTRSMASAQ 202
Query: 322 SAECDQFVEKYADLVISLLAQELDPSEVCEE 414
+ E ++ EK A+L I LL +E +E +E
Sbjct: 203 ARELEKEREKSANLQI-LLQEERKQNETFKE 232
>At1g67640.1 68414.m07716 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GB:AAC49885 GI:2576361 (Arabidopsis
thaliana); contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 441
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 142 RFDVTEFRNQHVFGQKRLLPVVVPVASQCALRVELVY 32
RFD QH FG+K L +VVP + V++VY
Sbjct: 93 RFDRYHELGQHAFGEKLGLWIVVPQQLIVEVGVDIVY 129
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,353,738
Number of Sequences: 28952
Number of extensions: 327025
Number of successful extensions: 1211
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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