Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00171
(797 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 159 1e-37
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 152 1e-35
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 144 2e-33
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 138 2e-31
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 116 9e-25
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 114 3e-24
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 114 3e-24
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 106 7e-22
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 105 1e-21
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 95 2e-18
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 89 1e-16
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 89 2e-16
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 85 1e-15
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 83 6e-15
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 68 3e-10
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 66 7e-10
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 59 1e-07
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 55 2e-06
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 53 7e-06
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 47 5e-04
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 42 0.018
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 42 0.024
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 41 0.041
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 40 0.055
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 40 0.055
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 36 0.89
UniRef50_A5C914 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 2.7
UniRef50_O05103 Cluster: HTH-type transcriptional regulator malR... 34 4.8
UniRef50_Q8IAX3 Cluster: Putative uncharacterized protein PF08_0... 33 8.3
UniRef50_A1D5L5 Cluster: Putative uncharacterized protein; n=3; ... 33 8.3
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 159 bits (385), Expect = 1e-37
Identities = 70/95 (73%), Positives = 85/95 (89%)
Frame = +2
Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 688
GAMKGAVDGGLN+PHS+KRFPGY AE+K FNA+VHRAHIFG HVA+YMRSLE++DE+SFK
Sbjct: 161 GAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFK 220
Query: 689 RQFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRR 793
RQFS+YIKLG+ AD +E IYKKAH+ ++R PT +
Sbjct: 221 RQFSRYIKLGIRADDLEDIYKKAHQ-AIRNDPTHK 254
Score = 147 bits (356), Expect = 3e-34
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 211 TCQVAYSRIEGDHIV 255
T Q+AY+RIEGD +V
Sbjct: 61 TVQIAYARIEGDRVV 75
Score = 105 bits (251), Expect = 2e-21
Identities = 49/82 (59%), Positives = 55/82 (67%)
Frame = +3
Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434
CAAYSHELP+YG++VGLTNYAAAY TG E+NVEPV
Sbjct: 76 CAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPV 135
Query: 435 DNGPGAFRCYLDVGLARTTTGA 500
D+GPGAFRC+LDVGLARTTTGA
Sbjct: 136 DDGPGAFRCFLDVGLARTTTGA 157
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 152 bits (368), Expect = 1e-35
Identities = 68/95 (71%), Positives = 81/95 (85%)
Frame = +2
Query: 512 AMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKR 691
AMKGAVDGGLN+PHS KRFPGYDAESK FNAE HRAHIFG HVA+YM +LE +D ++FKR
Sbjct: 131 AMKGAVDGGLNIPHSTKRFPGYDAESKTFNAEAHRAHIFGQHVADYMHALEDEDAEAFKR 190
Query: 692 QFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRRK 796
QFS+YIKLG+ AD IE IYKKAH+ ++R P+ +K
Sbjct: 191 QFSQYIKLGIAADQIETIYKKAHD-AIRADPSIKK 224
Score = 151 bits (366), Expect = 2e-35
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 211 TCQVAYSRIEGDHIV 255
TCQ+AYSRIEGD I+
Sbjct: 61 TCQIAYSRIEGDKIL 75
Score = 60.5 bits (140), Expect(2) = 9e-13
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +3
Query: 414 EYNVEPVDNGPGAFRCYLDVGLARTTTGA 500
EYNVE V+NGPGAFRCYLDVGL RTTTGA
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGA 126
Score = 35.9 bits (79), Expect(2) = 9e-13
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 255 CAAYSHELPRYGVK 296
CAAYSHELPRYGVK
Sbjct: 76 CAAYSHELPRYGVK 89
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 144 bits (350), Expect = 2e-33
Identities = 63/75 (84%), Positives = 72/75 (96%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 211 TCQVAYSRIEGDHIV 255
CQ+AY+RIEGD IV
Sbjct: 61 ICQIAYARIEGDMIV 75
Score = 136 bits (328), Expect = 8e-31
Identities = 61/96 (63%), Positives = 79/96 (82%)
Frame = +2
Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 688
GA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYK 220
Query: 689 RQFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRRK 796
+QFS+YIK VT D +E +YKKAH ++R +P K
Sbjct: 221 KQFSQYIKNSVTPDMMEEMYKKAH-AAIRENPVYEK 255
Score = 96.3 bits (229), Expect = 8e-19
Identities = 46/81 (56%), Positives = 49/81 (60%)
Frame = +3
Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434
CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 435 DNGPGAFRCYLDVGLARTTTG 497
D PGAF CYLD GLARTTTG
Sbjct: 136 DGQPGAFTCYLDAGLARTTTG 156
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 138 bits (333), Expect = 2e-31
Identities = 62/76 (81%), Positives = 69/76 (90%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 211 TCQVAYSRIEGDHIVA 258
Q+AYS+IEGD +VA
Sbjct: 61 VAQLAYSKIEGDVVVA 76
Score = 109 bits (262), Expect = 8e-23
Identities = 47/82 (57%), Positives = 61/82 (74%)
Frame = +2
Query: 515 MKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQ 694
MKG DGG+NVPHS RF G+D ESK++NAE HR I G HVA+YM L+++DED +KRQ
Sbjct: 162 MKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQ 221
Query: 695 FSKYIKLGVTADAIEAIYKKAH 760
FSK++ G+ AD + A Y+K H
Sbjct: 222 FSKFLAAGLNADNLVATYQKVH 243
Score = 73.3 bits (172), Expect = 6e-12
Identities = 38/81 (46%), Positives = 46/81 (56%)
Frame = +3
Query: 258 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 437
+AYSHELPRYG+KVGLTNYAAAY+TG +YNVE +
Sbjct: 77 SAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-E 135
Query: 438 NGPGAFRCYLDVGLARTTTGA 500
F+ LD+GLARTTTG+
Sbjct: 136 GDRAPFKAVLDIGLARTTTGS 156
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 116 bits (278), Expect = 9e-25
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 211 TCQVAYSRIEGDHIVA 258
CQV Y+ ++GD +VA
Sbjct: 61 ICQVIYATLKGDKVVA 76
Score = 63.3 bits (147), Expect = 7e-09
Identities = 25/56 (44%), Positives = 43/56 (76%), Gaps = 3/56 (5%)
Frame = +2
Query: 512 AMKGAVDGGLNVPHSIKRFPGYDAES---KKFNAEVHRAHIFGLHVAEYMRSLEQD 670
A+KGA DGG+++PH+ +RFPG+ ++ +K++A VH+ IFG+HV +YM L+++
Sbjct: 157 ALKGAADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHKDRIFGVHVDKYMALLQKE 212
Score = 39.1 bits (87), Expect = 0.13
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +3
Query: 258 AAYSHELPRYGVKVGLTNYAAAYSTG 335
AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 77 AAESTELKRFGLTSGLTNYAAAYATG 102
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 114 bits (274), Expect = 3e-24
Identities = 51/76 (67%), Positives = 61/76 (80%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 211 TCQVAYSRIEGDHIVA 258
CQ+A S IEGD I++
Sbjct: 61 ICQIASSHIEGDKILS 76
Score = 89.0 bits (211), Expect = 1e-16
Identities = 42/94 (44%), Positives = 61/94 (64%)
Frame = +2
Query: 512 AMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKR 691
A+KGA DGGLN+PH RFPG +FN E R +I G+HVAEYM S++++D D +K
Sbjct: 165 ALKGACDGGLNIPHGNNRFPG---SKNEFNPEQLRKNILGIHVAEYMASMKEEDMDKYKA 221
Query: 692 QFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRR 793
F+ Y+K + + IE +Y AHE +R +P ++
Sbjct: 222 HFNDYLKHKIDENNIEKMYLTAHE-KIRKNPEKK 254
Score = 41.5 bits (93), Expect = 0.024
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +3
Query: 261 AYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 431
A S EL RYG+ VGL NYAAAY+TG E +
Sbjct: 78 AKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKE 137
Query: 432 VDNGPGAFRCYLDVGLARTTTG 497
+ + +LDVG+ RTTTG
Sbjct: 138 EEGDRKPIKAFLDVGITRTTTG 159
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 114 bits (274), Expect = 3e-24
Identities = 47/75 (62%), Positives = 65/75 (86%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 211 TCQVAYSRIEGDHIV 255
Q+ ++I GD +V
Sbjct: 84 IAQIVQAKIVGDEVV 98
Score = 93.1 bits (221), Expect = 7e-18
Identities = 44/97 (45%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Frame = +2
Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD---DED 679
G +KGAVDGG+ VPH RFPGY+ E +A+VHR IFG HVA+Y++ ++++ + D
Sbjct: 190 GVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFGKHVADYLKQVKEEASSNPD 249
Query: 680 SFKRQFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTR 790
QFSKY+ V ++IE +YKKAH ++R P++
Sbjct: 250 EKCVQFSKYMAAKVLPESIEGMYKKAH-AAIRADPSK 285
Score = 54.0 bits (124), Expect = 4e-06
Identities = 34/87 (39%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +3
Query: 258 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 437
AAY+HELP +G++ GLTNYAAAY+TG V
Sbjct: 100 AAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKK 159
Query: 438 NGPG------AFRCYLDVGLARTTTGA 500
+ G F+ LDVGLARTTTGA
Sbjct: 160 DDEGDDEERFPFKAILDVGLARTTTGA 186
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 106 bits (254), Expect = 7e-22
Identities = 48/97 (49%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Frame = +2
Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKK---FNAEVHRAHIFGLHVAEYMRSLEQDDED 679
GA+KGA DGGL+VPHS KRFPGY + + ++A+ HR IFG HVA YM L+++D +
Sbjct: 110 GALKGACDGGLHVPHSEKRFPGYSVDEENNGTYDAQAHRDRIFGAHVASYMEYLKEEDPE 169
Query: 680 SFKRQFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTR 790
+++QFS Y+K G+ + A+E +Y KAHE ++R +P R
Sbjct: 170 RYRKQFSAYLKHGLESSALEDMYLKAHE-NIRKNPVR 205
Score = 54.0 bits (124), Expect = 4e-06
Identities = 32/80 (40%), Positives = 37/80 (46%)
Frame = +3
Query: 258 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 437
+A S EL YGVKVGLTNYAAAY TG Y+VE +
Sbjct: 26 SADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKLEVDGEVYHVEEEE 85
Query: 438 NGPGAFRCYLDVGLARTTTG 497
N F+ LDVG+ TTG
Sbjct: 86 NERRPFKALLDVGVKNVTTG 105
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 105 bits (252), Expect = 1e-21
Identities = 56/101 (55%), Positives = 67/101 (66%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 211 TCQVAYSRIEGDHIVALLIHMSCHVMV*RLV*QIMLQHIQL 333
T Q+ + I GD I M+C M + V QI Q I L
Sbjct: 72 TAQIISASIAGD---MRPIPMNCLTMGLKWVLQITRQLIVL 109
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 95.1 bits (226), Expect = 2e-18
Identities = 43/69 (62%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Frame = +1
Query: 46 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 219
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 220 VAYSRIEGD 246
V Y+ + GD
Sbjct: 73 VVYATLSGD 81
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/82 (45%), Positives = 45/82 (54%)
Frame = +3
Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434
CAAYSHELP+YG+K GLTNYAA Y+TG +Y+VE
Sbjct: 85 CAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQG 144
Query: 435 DNGPGAFRCYLDVGLARTTTGA 500
D F+C+LD GL RT+TGA
Sbjct: 145 DEEARPFKCFLDTGLVRTSTGA 166
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/95 (35%), Positives = 57/95 (60%)
Frame = +2
Query: 512 AMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKR 691
A+KGAVDGGL++PH+ KRF GYD + K + + +I G VAEY +++++ + F++
Sbjct: 171 ALKGAVDGGLDIPHNEKRFAGYDLQDKSHDPDTLERYIKGGVVAEYAEEMQEEEPEKFEQ 230
Query: 692 QFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRRK 796
F+KY+ +E ++ E ++R PT K
Sbjct: 231 HFAKYLAEDFDPTELEDAMEEVFE-AIREDPTHEK 264
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
Frame = +2
Query: 509 GAMKGAVDGGLNVPHSIKRFPGY-----DAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 673
G +KGA DGG+N+PHS RFPGY + ES K+ E H+A IFG H+ YM+ L+
Sbjct: 450 GVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKPEDHKARIFGKHIDAYMKHLKGQS 509
Query: 674 EDSFKRQFSKYIKL--GVTADAIEAIYKKAHEPSVRIHPTRRK 796
++F++QFSK+ K D++E ++ K H +R +P R K
Sbjct: 510 NEAFQKQFSKWSKTLEAAKVDSVEKLFTKVH-AEIRKNPERVK 551
Score = 74.1 bits (174), Expect = 4e-12
Identities = 28/58 (48%), Positives = 44/58 (75%)
Frame = +1
Query: 82 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 255
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVL 364
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/81 (37%), Positives = 37/81 (45%)
Frame = +3
Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434
CAA S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 365 CAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDED 424
Query: 435 DNGPGAFRCYLDVGLARTTTG 497
F+ LD GL RTTTG
Sbjct: 425 QKEKKPFKAILDAGLVRTTTG 445
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 123
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 88.6 bits (210), Expect = 2e-16
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = +2
Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 688
GA+K VD GL++PHS K FPGYD+ SK+FNAEV+ I G +V +YM L ++DED++K
Sbjct: 83 GALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVDYMCFLMEEDEDAYK 142
Query: 689 RQFSKYIKLGVTADAIEAI 745
+Q +YIK +T D +E I
Sbjct: 143 KQSLEYIKNNITPDMMEEI 161
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +3
Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTG 335
CAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 26 CAAYAHELPKSGVKVGLTNYAAAYCIG 52
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/96 (43%), Positives = 59/96 (61%)
Frame = +2
Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 688
GA+KGA D GLNVPHS +F G+ + F+A+ IFG +++EYM+ L D + +K
Sbjct: 154 GALKGASDAGLNVPHSAAKFYGHKPDGS-FDAKELHDRIFGYNISEYMKQLRDGDPEKYK 212
Query: 689 RQFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRRK 796
QFS YIK G+ + I IYK A + + PTR+K
Sbjct: 213 TQFSSYIKKGIDPEEIPRIYKSAFD-KIAEDPTRKK 247
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +1
Query: 58 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 237
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 238 EGDHIV 255
+GD ++
Sbjct: 64 DGDRVM 69
Score = 46.4 bits (105), Expect = 8e-04
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVD 437
A S EL RYG+ G TNY+AAY+TG Y+V + +D
Sbjct: 72 ADSRELERYGINFGATNYSAAYATG--FLIGRRALTAMSLDEVYRPKEIDGTYSVTKDID 129
Query: 438 NGPGAFRCYLDVGLARTTTGA 500
A R +LD+GLAR+T GA
Sbjct: 130 GEKKAPRVFLDIGLARSTRGA 150
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 83.4 bits (197), Expect = 6e-15
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = +1
Query: 43 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 222
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 223 AYSRIEGDHIV 255
+ + GD V
Sbjct: 64 VVAELTGDKTV 74
Score = 77.8 bits (183), Expect = 3e-13
Identities = 42/102 (41%), Positives = 66/102 (64%), Gaps = 12/102 (11%)
Frame = +2
Query: 515 MKGAVDGGLNVPHSIKR----FPGYDAESKKFNAEV--------HRAHIFGLHVAEYMRS 658
MKGAVDGGL +PH++ R F D ++ K +V ++ +I G VA+YMR
Sbjct: 157 MKGAVDGGLFIPHNVCRLACKFDKKDKDAGKDRKDVPAEKIVKGNQYYILGGAVADYMRK 216
Query: 659 LEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEPSVRIHP 784
L+++ E+ + +QFS+Y+K G+TAD++E IYK AH ++R +P
Sbjct: 217 LKKESEEKYNKQFSRYVKAGITADSLEKIYKDAH-AAIRKNP 257
Score = 55.2 bits (127), Expect = 2e-06
Identities = 34/82 (41%), Positives = 42/82 (51%)
Frame = +3
Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434
C A S ELP+YG+K+GL+NY AAY+TG EY +
Sbjct: 75 CQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKTEITEEYLNDEE 131
Query: 435 DNGPGAFRCYLDVGLARTTTGA 500
+ P F+ LDVGLARTTTGA
Sbjct: 132 NRRP--FKVILDVGLARTTTGA 151
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = +2
Query: 584 ESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHE 763
+SK+ +AEVHR +I+G HVA YM L +D+ + ++ FS YIK + D IE +YKK H
Sbjct: 4 DSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVH- 62
Query: 764 PSVRIHPTRRK 796
++R P+ +K
Sbjct: 63 AAIRPDPSPKK 73
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 66.5 bits (155), Expect = 7e-10
Identities = 28/67 (41%), Positives = 45/67 (67%)
Frame = +1
Query: 55 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 234
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 235 IEGDHIV 255
++GD I+
Sbjct: 69 VDGDFIL 75
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/81 (28%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 512 AMKGAVDGGLNVPHSIKRFPGYDAESKKFNA-EVHRAHIFGLHVAEYMRSLEQDDEDSFK 688
+MKG+VD G+N+PH+ + + ++ + ++ E+ G+H+ +Y+ L+ +DE+ K
Sbjct: 148 SMKGSVDSGINIPHNYNKI--FKVKNNEIDSKELFNERSKGIHIIKYIDLLKNEDEEKLK 205
Query: 689 RQFSKYIKLGVTADAIEAIYK 751
+QFS + ++ D++ I K
Sbjct: 206 KQFS---NIFLSRDSLSTIKK 223
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 58.8 bits (136), Expect = 1e-07
Identities = 44/131 (33%), Positives = 59/131 (45%)
Frame = +1
Query: 79 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVA 258
+++F+R +EGKTDYYARKRL +QDKN+YNTP+ + +
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPEXDDSSCNXQRYHLPDCIXKKFXSS---V 92
Query: 259 LLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDCFKDLDLTPYTLAQQMSQVMNTMLNLST 438
+HM MV +L IMLQ I L C L T A+ +NTM T
Sbjct: 93 PCMHMKFQNMVXKLAXNIMLQPIALACCWPAGFXIGLAWTRSMKAKWRXMEVNTMWKALT 152
Query: 439 MDQEHLDVIWM 471
+ IWM
Sbjct: 153 VSLVPSLAIWM 163
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 55.2 bits (127), Expect = 2e-06
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = +2
Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLE 664
G +K A+DG LN+PH+ +RF G ++K+ +A+VHR I+G +V+ Y+ +L+
Sbjct: 74 GVLKEALDGSLNIPHNDRRFVGSSKDNKQLDAKVHRKSIYGGYVSAYIETLK 125
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +1
Query: 73 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 252
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 253 VA 258
+A
Sbjct: 59 IA 60
Score = 43.2 bits (97), Expect = 0.008
Identities = 21/75 (28%), Positives = 44/75 (58%)
Frame = +2
Query: 512 AMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKR 691
A+KGA+D G+ +PHS + PG ++ E H+A++ +L++++ + ++R
Sbjct: 120 ALKGALDAGVEIPHSEEILPG----DERVRCE---------HIAQWAEALKEENAELYQR 166
Query: 692 QFSKYIKLGVTADAI 736
QFS+Y+ G+ + +
Sbjct: 167 QFSRYLDRGLNPEEL 181
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 47.2 bits (107), Expect = 5e-04
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +1
Query: 73 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 246
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLL-----SSGTP--RMVVRKTNRQIIVQLVVPEVEGD 56
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.9 bits (94), Expect = 0.018
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +1
Query: 73 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 252
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 253 VA 258
+A
Sbjct: 59 LA 60
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.5 bits (93), Expect = 0.024
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +1
Query: 73 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 246
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGD 56
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 40.7 bits (91), Expect = 0.041
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +1
Query: 70 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 249
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 250 IV 255
++
Sbjct: 58 VI 59
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 40.3 bits (90), Expect = 0.055
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 204
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 205 DVTCQVAYSRIEGDHIVA 258
+++ + +S + GD IVA
Sbjct: 59 NLSGVITFSSLSGDTIVA 76
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 40.3 bits (90), Expect = 0.055
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +1
Query: 76 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 246
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGD 56
Score = 35.9 bits (79), Expect = 1.2
Identities = 21/74 (28%), Positives = 40/74 (54%)
Frame = +2
Query: 515 MKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQ 694
+KGA+D GL +PH+ P + I G H+A+Y S++ D++++ +
Sbjct: 120 LKGALDAGLYIPHNDSILP-------------EDSRIRGEHIAQYAESMDDDEKNA---K 163
Query: 695 FSKYIKLGVTADAI 736
F+ YI+ G++ + I
Sbjct: 164 FANYIRCGLSPEEI 177
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 36.3 bits (80), Expect = 0.89
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +1
Query: 91 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 255
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVL 55
>UniRef50_A5C914 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 309
Score = 35.1 bits (77), Expect = 2.1
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +2
Query: 563 RFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDE------DSFKRQFSKYIKLGVT 724
RF ++ + K+ +++VH H+ HVA Y+ L +D+ +F+ F Y +G+
Sbjct: 129 RFAEFNKDGKQLDSDVHLKHVRDGHVAAYVVILMKDNSLSIEGYHTFRGGFWNYFSMGMD 188
Query: 725 ADAIEAIYK 751
A A A +K
Sbjct: 189 ARASYAFHK 197
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +1
Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 211 TCQVA 225
C +A
Sbjct: 161 QCSLA 165
>UniRef50_O05103 Cluster: HTH-type transcriptional regulator malR;
n=4; Clostridium|Rep: HTH-type transcriptional regulator
malR - Clostridium butyricum
Length = 335
Score = 33.9 bits (74), Expect = 4.8
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 506 LGAMKGAVDGGLNVPH--SIKRFPGYDAESKKFNAEV 610
LGA+K A+D GL+VP SI F G D ESK +N +
Sbjct: 254 LGAIKAAIDNGLDVPRDISIVGFDGMD-ESKYYNPSI 289
>UniRef50_Q8IAX3 Cluster: Putative uncharacterized protein
PF08_0078; n=2; Plasmodium|Rep: Putative uncharacterized
protein PF08_0078 - Plasmodium falciparum (isolate 3D7)
Length = 1419
Score = 33.1 bits (72), Expect = 8.3
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -3
Query: 327 NMLQHNLSDQPSHHNVATHVNKQRNNMVTFNPRVGHLACYIFVGETHNQTIFRCVI 160
N+LQ + D+ +H+N + N +NN + + V + I + E +N TIF V+
Sbjct: 386 NILQEDNKDENNHNNNNNNNNNNKNNELFYKNEVFYFKQNIHLLENNNLTIFEKVL 441
>UniRef50_A1D5L5 Cluster: Putative uncharacterized protein; n=3;
cellular organisms|Rep: Putative uncharacterized protein
- Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181)(Aspergillus fischerianus (strain ATCC 1020 /
DSM 3700 / NRRL 181))
Length = 357
Score = 33.1 bits (72), Expect = 8.3
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +2
Query: 503 CLGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 682
CL A +GA D + +K FPG D+ SK V + VA+ RS+EQ+++ S
Sbjct: 296 CLPAGEGARDLDMMSFSLVKTFPGKDSRSKNMPPWVPKESFH--RVADVFRSMEQEEQRS 353
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,879,234
Number of Sequences: 1657284
Number of extensions: 15517759
Number of successful extensions: 38723
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 37100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38684
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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