Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00171
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   155   1e-39
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           24   6.3  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     24   6.3  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   6.3  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  155 bits (377), Expect = 1e-39
 Identities = 69/95 (72%), Positives = 81/95 (85%)
 Frame = +2

Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 688
           GAMKGAVDGGLN+PHS+KRFPGY AE+K FNAE+HR HIFGLHVA YMR+LE++DE++FK
Sbjct: 161 GAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFK 220

Query: 689 RQFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRR 793
           RQFSKYI LG+ AD IE IYK AH    +I P+RR
Sbjct: 221 RQFSKYISLGIKADDIENIYKNAHASIRKIPPSRR 255



 Score =  148 bits (358), Expect = 2e-37
 Identities = 65/75 (86%), Positives = 72/75 (96%)
 Frame = +1

Query: 31  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210
           MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 211 TCQVAYSRIEGDHIV 255
           TCQ+AY RIEGD IV
Sbjct: 61  TCQIAYRRIEGDRIV 75



 Score =  103 bits (248), Expect = 5e-24
 Identities = 51/82 (62%), Positives = 52/82 (63%)
 Frame = +3

Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434
           CAAYSHELPRYGVKVGLTNYAAAY TG                          EY VEPV
Sbjct: 76  CAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPV 135

Query: 435 DNGPGAFRCYLDVGLARTTTGA 500
           D GP AFRCYLDVGLARTTTG+
Sbjct: 136 DEGPAAFRCYLDVGLARTTTGS 157


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -3

Query: 369 QVFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRN 253
           ++ EAV V  A+  NM+  ++S+QP   +    + K RN
Sbjct: 110 ELMEAVDVA-AELKNMVLQDISNQPKQQSTTRPLRKCRN 147


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -3

Query: 369 QVFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRN 253
           ++ EAV V  A+  NM+  ++S+QP   +    + K RN
Sbjct: 111 ELMEAVDVA-AELKNMVLQDISNQPKQQSTTRPLRKCRN 148


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 373 LTPYTLAQQMSQVMNTMLNLSTMDQEHL 456
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 849,410
Number of Sequences: 2352
Number of extensions: 18229
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)