BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00171 (797 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY071305-1|AAL48927.1| 299|Drosophila melanogaster RE33114p pro... 159 5e-39 AE014134-3597|EAA46016.1| 299|Drosophila melanogaster CG17489-P... 159 5e-39 AE014134-3596|EAA46019.1| 299|Drosophila melanogaster CG17489-P... 159 5e-39 AE014134-3595|EAA46017.2| 320|Drosophila melanogaster CG17489-P... 159 5e-39 BT012458-1|AAS93729.1| 137|Drosophila melanogaster RE57391p pro... 155 9e-38 AF195190-1|AAF27819.1| 177|Drosophila melanogaster yippee inter... 153 2e-37 BT011515-1|AAS15651.1| 178|Drosophila melanogaster SD13191p pro... 147 2e-35 AE014134-3599|EAA46018.1| 178|Drosophila melanogaster CG17489-P... 147 2e-35 AE014134-3598|EAA46020.1| 178|Drosophila melanogaster CG17489-P... 147 2e-35 AY484405-1|AAR86939.1| 857|Drosophila melanogaster reverse tran... 29 7.4 AY484404-1|AAR86938.1| 857|Drosophila melanogaster reverse tran... 29 7.4 AF418572-1|AAL14648.1| 211|Drosophila melanogaster Orf1 protein. 29 7.4 >AY071305-1|AAL48927.1| 299|Drosophila melanogaster RE33114p protein. Length = 299 Score = 159 bits (385), Expect = 5e-39 Identities = 70/95 (73%), Positives = 85/95 (89%) Frame = +2 Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 688 GAMKGAVDGGLN+PHS+KRFPGY AE+K FNA+VHRAHIFG HVA+YMRSLE++DE+SFK Sbjct: 161 GAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFK 220 Query: 689 RQFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRR 793 RQFS+YIKLG+ AD +E IYKKAH+ ++R PT + Sbjct: 221 RQFSRYIKLGIRADDLEDIYKKAHQ-AIRNDPTHK 254 Score = 147 bits (356), Expect = 2e-35 Identities = 66/75 (88%), Positives = 71/75 (94%) Frame = +1 Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210 MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+ Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60 Query: 211 TCQVAYSRIEGDHIV 255 T Q+AY+RIEGD +V Sbjct: 61 TVQIAYARIEGDRVV 75 Score = 105 bits (251), Expect = 9e-23 Identities = 49/82 (59%), Positives = 55/82 (67%) Frame = +3 Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434 CAAYSHELP+YG++VGLTNYAAAY TG E+NVEPV Sbjct: 76 CAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPV 135 Query: 435 DNGPGAFRCYLDVGLARTTTGA 500 D+GPGAFRC+LDVGLARTTTGA Sbjct: 136 DDGPGAFRCFLDVGLARTTTGA 157 >AE014134-3597|EAA46016.1| 299|Drosophila melanogaster CG17489-PB, isoform B protein. Length = 299 Score = 159 bits (385), Expect = 5e-39 Identities = 70/95 (73%), Positives = 85/95 (89%) Frame = +2 Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 688 GAMKGAVDGGLN+PHS+KRFPGY AE+K FNA+VHRAHIFG HVA+YMRSLE++DE+SFK Sbjct: 161 GAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFK 220 Query: 689 RQFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRR 793 RQFS+YIKLG+ AD +E IYKKAH+ ++R PT + Sbjct: 221 RQFSRYIKLGIRADDLEDIYKKAHQ-AIRNDPTHK 254 Score = 147 bits (356), Expect = 2e-35 Identities = 66/75 (88%), Positives = 71/75 (94%) Frame = +1 Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210 MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+ Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60 Query: 211 TCQVAYSRIEGDHIV 255 T Q+AY+RIEGD +V Sbjct: 61 TVQIAYARIEGDRVV 75 Score = 105 bits (251), Expect = 9e-23 Identities = 49/82 (59%), Positives = 55/82 (67%) Frame = +3 Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434 CAAYSHELP+YG++VGLTNYAAAY TG E+NVEPV Sbjct: 76 CAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPV 135 Query: 435 DNGPGAFRCYLDVGLARTTTGA 500 D+GPGAFRC+LDVGLARTTTGA Sbjct: 136 DDGPGAFRCFLDVGLARTTTGA 157 >AE014134-3596|EAA46019.1| 299|Drosophila melanogaster CG17489-PA, isoform A protein. Length = 299 Score = 159 bits (385), Expect = 5e-39 Identities = 70/95 (73%), Positives = 85/95 (89%) Frame = +2 Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 688 GAMKGAVDGGLN+PHS+KRFPGY AE+K FNA+VHRAHIFG HVA+YMRSLE++DE+SFK Sbjct: 161 GAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFK 220 Query: 689 RQFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRR 793 RQFS+YIKLG+ AD +E IYKKAH+ ++R PT + Sbjct: 221 RQFSRYIKLGIRADDLEDIYKKAHQ-AIRNDPTHK 254 Score = 147 bits (356), Expect = 2e-35 Identities = 66/75 (88%), Positives = 71/75 (94%) Frame = +1 Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210 MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+ Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60 Query: 211 TCQVAYSRIEGDHIV 255 T Q+AY+RIEGD +V Sbjct: 61 TVQIAYARIEGDRVV 75 Score = 105 bits (251), Expect = 9e-23 Identities = 49/82 (59%), Positives = 55/82 (67%) Frame = +3 Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434 CAAYSHELP+YG++VGLTNYAAAY TG E+NVEPV Sbjct: 76 CAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPV 135 Query: 435 DNGPGAFRCYLDVGLARTTTGA 500 D+GPGAFRC+LDVGLARTTTGA Sbjct: 136 DDGPGAFRCFLDVGLARTTTGA 157 >AE014134-3595|EAA46017.2| 320|Drosophila melanogaster CG17489-PC, isoform C protein. Length = 320 Score = 159 bits (385), Expect = 5e-39 Identities = 70/95 (73%), Positives = 85/95 (89%) Frame = +2 Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 688 GAMKGAVDGGLN+PHS+KRFPGY AE+K FNA+VHRAHIFG HVA+YMRSLE++DE+SFK Sbjct: 182 GAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFK 241 Query: 689 RQFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRR 793 RQFS+YIKLG+ AD +E IYKKAH+ ++R PT + Sbjct: 242 RQFSRYIKLGIRADDLEDIYKKAHQ-AIRNDPTHK 275 Score = 145 bits (351), Expect = 7e-35 Identities = 65/74 (87%), Positives = 70/74 (94%) Frame = +1 Query: 34 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 213 GFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+T Sbjct: 23 GFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDIT 82 Query: 214 CQVAYSRIEGDHIV 255 Q+AY+RIEGD +V Sbjct: 83 VQIAYARIEGDRVV 96 Score = 105 bits (251), Expect = 9e-23 Identities = 49/82 (59%), Positives = 55/82 (67%) Frame = +3 Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434 CAAYSHELP+YG++VGLTNYAAAY TG E+NVEPV Sbjct: 97 CAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPV 156 Query: 435 DNGPGAFRCYLDVGLARTTTGA 500 D+GPGAFRC+LDVGLARTTTGA Sbjct: 157 DDGPGAFRCFLDVGLARTTTGA 178 >BT012458-1|AAS93729.1| 137|Drosophila melanogaster RE57391p protein. Length = 137 Score = 155 bits (375), Expect = 9e-38 Identities = 68/93 (73%), Positives = 83/93 (89%) Frame = +2 Query: 515 MKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQ 694 MKGAVDGGLN+PHS+KRFPGY AE+K FNA+VHRAHIFG HVA+YMRSLE++DE+SFKRQ Sbjct: 1 MKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQ 60 Query: 695 FSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRR 793 FS+YIKLG+ AD +E IYKKAH+ ++R PT + Sbjct: 61 FSRYIKLGIRADDLEDIYKKAHQ-AIRNDPTHK 92 >AF195190-1|AAF27819.1| 177|Drosophila melanogaster yippee interacting protein 6 protein. Length = 177 Score = 153 bits (372), Expect = 2e-37 Identities = 68/95 (71%), Positives = 83/95 (87%) Frame = +2 Query: 509 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 688 GAMKGAVDGGLN+PHS+ FPGY AE+K FNA+VHRAHIFG HVA+YMRSLE++DE+SFK Sbjct: 46 GAMKGAVDGGLNIPHSVXLFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFK 105 Query: 689 RQFSKYIKLGVTADAIEAIYKKAHEPSVRIHPTRR 793 RQFS+YIKLG+ AD +E IYKKAH+ ++R PT + Sbjct: 106 RQFSRYIKLGIRADDLEDIYKKAHQ-AIRNDPTHK 139 Score = 62.5 bits (145), Expect = 6e-10 Identities = 26/29 (89%), Positives = 29/29 (100%) Frame = +3 Query: 414 EYNVEPVDNGPGAFRCYLDVGLARTTTGA 500 E+NVEPVD+GPGAFRC+LDVGLARTTTGA Sbjct: 14 EFNVEPVDDGPGAFRCFLDVGLARTTTGA 42 >BT011515-1|AAS15651.1| 178|Drosophila melanogaster SD13191p protein. Length = 178 Score = 147 bits (356), Expect = 2e-35 Identities = 66/75 (88%), Positives = 71/75 (94%) Frame = +1 Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210 MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+ Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60 Query: 211 TCQVAYSRIEGDHIV 255 T Q+AY+RIEGD +V Sbjct: 61 TVQIAYARIEGDRVV 75 Score = 105 bits (251), Expect = 9e-23 Identities = 49/82 (59%), Positives = 55/82 (67%) Frame = +3 Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434 CAAYSHELP+YG++VGLTNYAAAY TG E+NVEPV Sbjct: 76 CAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPV 135 Query: 435 DNGPGAFRCYLDVGLARTTTGA 500 D+GPGAFRC+LDVGLARTTTGA Sbjct: 136 DDGPGAFRCFLDVGLARTTTGA 157 Score = 33.1 bits (72), Expect = 0.45 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +2 Query: 509 GAMKGAVDGGLNVP 550 GAMKGAVDGGLN+P Sbjct: 161 GAMKGAVDGGLNIP 174 >AE014134-3599|EAA46018.1| 178|Drosophila melanogaster CG17489-PE, isoform E protein. Length = 178 Score = 147 bits (356), Expect = 2e-35 Identities = 66/75 (88%), Positives = 71/75 (94%) Frame = +1 Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210 MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+ Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60 Query: 211 TCQVAYSRIEGDHIV 255 T Q+AY+RIEGD +V Sbjct: 61 TVQIAYARIEGDRVV 75 Score = 105 bits (251), Expect = 9e-23 Identities = 49/82 (59%), Positives = 55/82 (67%) Frame = +3 Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434 CAAYSHELP+YG++VGLTNYAAAY TG E+NVEPV Sbjct: 76 CAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPV 135 Query: 435 DNGPGAFRCYLDVGLARTTTGA 500 D+GPGAFRC+LDVGLARTTTGA Sbjct: 136 DDGPGAFRCFLDVGLARTTTGA 157 Score = 37.9 bits (84), Expect = 0.016 Identities = 15/16 (93%), Positives = 16/16 (100%) Frame = +2 Query: 509 GAMKGAVDGGLNVPHS 556 GAMKGAVDGGLN+PHS Sbjct: 161 GAMKGAVDGGLNIPHS 176 >AE014134-3598|EAA46020.1| 178|Drosophila melanogaster CG17489-PD, isoform D protein. Length = 178 Score = 147 bits (356), Expect = 2e-35 Identities = 66/75 (88%), Positives = 71/75 (94%) Frame = +1 Query: 31 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 210 MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+ Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60 Query: 211 TCQVAYSRIEGDHIV 255 T Q+AY+RIEGD +V Sbjct: 61 TVQIAYARIEGDRVV 75 Score = 105 bits (251), Expect = 9e-23 Identities = 49/82 (59%), Positives = 55/82 (67%) Frame = +3 Query: 255 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 434 CAAYSHELP+YG++VGLTNYAAAY TG E+NVEPV Sbjct: 76 CAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPV 135 Query: 435 DNGPGAFRCYLDVGLARTTTGA 500 D+GPGAFRC+LDVGLARTTTGA Sbjct: 136 DDGPGAFRCFLDVGLARTTTGA 157 Score = 37.9 bits (84), Expect = 0.016 Identities = 15/16 (93%), Positives = 16/16 (100%) Frame = +2 Query: 509 GAMKGAVDGGLNVPHS 556 GAMKGAVDGGLN+PHS Sbjct: 161 GAMKGAVDGGLNIPHS 176 >AY484405-1|AAR86939.1| 857|Drosophila melanogaster reverse transcriptase protein. Length = 857 Score = 29.1 bits (62), Expect = 7.4 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = -2 Query: 682 RILIILFKTSHVFSNMQTKDVSPVYFSIELFGFCIIARESFDGMRNIEATVNSTL 518 +IL +L K H QTK + +IE A+ F+ RNIE + +TL Sbjct: 106 KILNLLIKHKHNLLQEQTKHMEKAKTNIEQLMTTDDAKAFFESERNIENKITTTL 160 >AY484404-1|AAR86938.1| 857|Drosophila melanogaster reverse transcriptase protein. Length = 857 Score = 29.1 bits (62), Expect = 7.4 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = -2 Query: 682 RILIILFKTSHVFSNMQTKDVSPVYFSIELFGFCIIARESFDGMRNIEATVNSTL 518 +IL +L K H QTK + +IE A+ F+ RNIE + +TL Sbjct: 106 KILNLLIKHKHNLLQEQTKHMEKAKTNIEQLMTTDDAKAFFESERNIENKITTTL 160 >AF418572-1|AAL14648.1| 211|Drosophila melanogaster Orf1 protein. Length = 211 Score = 29.1 bits (62), Expect = 7.4 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = -2 Query: 682 RILIILFKTSHVFSNMQTKDVSPVYFSIELFGFCIIARESFDGMRNIEATVNSTL 518 +IL +L K H QTK + +IE A+ F+ RNIE + +TL Sbjct: 106 KILNLLIKHKHNLLQEQTKHMEKAKTNIEQLMTTDDAKAFFESERNIENKITTTL 160 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 36,368,494 Number of Sequences: 53049 Number of extensions: 768826 Number of successful extensions: 1977 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1970 length of database: 24,988,368 effective HSP length: 84 effective length of database: 20,532,252 effective search space used: 3716337612 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -