Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00170
         (477 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   110   3e-26
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   4.1  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   5.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   9.6  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  110 bits (264), Expect = 3e-26
 Identities = 50/59 (84%), Positives = 55/59 (93%)
 Frame = +2

Query: 89  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISINFRK 265
           IEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHSQVRGISI  ++
Sbjct: 17  IEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQE 75



 Score = 69.7 bits (163), Expect = 5e-14
 Identities = 35/55 (63%), Positives = 40/55 (72%)
 Frame = +1

Query: 253 QLQXXXXXXXDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQG 417
           +LQ       DNYVP+VSALE DIIEVDP+TK+MLK LDFNNI  +QLT P   G
Sbjct: 72  KLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNPTAPG 125


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 319 DIIEVDPDTKDMLKMLDFNNINGL 390
           DI +VDPD    L  +  NNI G+
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGI 659


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
 Frame = -1

Query: 297 WDIVVTPLTLLFLKLIEIPRT----CECLR--RLIKCVANPAILFLRGLV 166
           WDI++T +++LF +L+ I  T    CE  R  R +        LF+ G++
Sbjct: 103 WDILLTAISILF-RLVSISLTVLLSCEYYRNGRTVYFALTLVGLFVPGII 151


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -1

Query: 324  DVMFESRHFWDIVVTPLTLLFLKLIEIPRTCECLRRLIKCVANPAI 187
            +V+F +  F D +V PL+    KL  +P+     R L   + + AI
Sbjct: 3030 NVLFSTEQFSDFIVKPLSKASPKL-RLPKPPNLARMLRFRIRSDAI 3074


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,046
Number of Sequences: 2352
Number of extensions: 7722
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)