Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00170
         (477 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   109   2e-24
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   109   2e-24
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   109   2e-24
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   109   2e-24
AY084116-1|AAL89854.1|  220|Drosophila melanogaster AT11646p pro...    30   1.4  
AE014297-1526|AAS65145.1|  220|Drosophila melanogaster CG17207-P...    29   4.3  
AE014296-1201|AAN12075.1|  177|Drosophila melanogaster CG32390-P...    27   9.9  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  109 bits (262), Expect = 2e-24
 Identities = 50/59 (84%), Positives = 54/59 (91%)
 Frame = +2

Query: 89  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISINFRK 265
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISI  ++
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQE 75



 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 37/53 (69%), Positives = 41/53 (77%)
 Frame = +1

Query: 253 QLQXXXXXXXDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 411
           +LQ       DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 72  KLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  109 bits (262), Expect = 2e-24
 Identities = 50/59 (84%), Positives = 54/59 (91%)
 Frame = +2

Query: 89  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISINFRK 265
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISI  ++
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQE 75



 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 37/53 (69%), Positives = 41/53 (77%)
 Frame = +1

Query: 253 QLQXXXXXXXDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 411
           +LQ       DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 72  KLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  109 bits (262), Expect = 2e-24
 Identities = 50/59 (84%), Positives = 54/59 (91%)
 Frame = +2

Query: 89  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISINFRK 265
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISI  ++
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQE 75



 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 37/53 (69%), Positives = 41/53 (77%)
 Frame = +1

Query: 253 QLQXXXXXXXDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 411
           +LQ       DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 72  KLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  109 bits (262), Expect = 2e-24
 Identities = 50/59 (84%), Positives = 54/59 (91%)
 Frame = +2

Query: 89  IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISINFRK 265
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISI  ++
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQE 75



 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 37/53 (69%), Positives = 41/53 (77%)
 Frame = +1

Query: 253 QLQXXXXXXXDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 411
           +LQ       DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 72  KLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124


>AY084116-1|AAL89854.1|  220|Drosophila melanogaster AT11646p
           protein.
          Length = 220

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/53 (30%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
 Frame = -1

Query: 165 GMIAISSHILLFVSKSSVNLV*YFSII-IFAAFLTVLVRTRPMAEVVTALLLT 10
           G++ ++ ++ + ++ +  NLV YF +  + +A + +++R+R  A VV  LLLT
Sbjct: 91  GLLWLAGYLRIALNPTQRNLVKYFQVCNVISALMVIMLRSRRTA-VVAFLLLT 142


>AE014297-1526|AAS65145.1|  220|Drosophila melanogaster CG17207-PA
           protein.
          Length = 220

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/53 (28%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = -1

Query: 165 GMIAISSHILLFVSKSSVNLV*YFSII-IFAAFLTVLVRTRPMAEVVTALLLT 10
           G++ ++ ++ + ++ +  NL  YF +  + +A + +++R+R  A VV  LLLT
Sbjct: 91  GLLWLAGYLRIALNPTQRNLAKYFQVCNVISALMVIMLRSRRTA-VVAFLLLT 142


>AE014296-1201|AAN12075.1|  177|Drosophila melanogaster CG32390-PA
           protein.
          Length = 177

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -3

Query: 322 CHVREQTLLGHSCHASHAPLPEVDRDSSHLRVSETPH*MCGKSSNFIPKRL--GRNDSD 152
           CHV    LL H+C +S+ P   ++ D   L    + +     ++ F P RL     DSD
Sbjct: 7   CHVTTTLLLLHNCISSNNPDQRLNEDICTLSTLCSSYKKLSPTTEFPPMRLLSPNQDSD 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,079,180
Number of Sequences: 53049
Number of extensions: 330884
Number of successful extensions: 852
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)