Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00167
         (803 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065918-1|AAH65918.1|  707|Homo sapiens zinc finger, CCHC domai...    31   6.4  
BC017704-1|AAH17704.2|  492|Homo sapiens ZCCHC8 protein protein.       31   6.4  
AL157434-1|CAB75658.1|  469|Homo sapiens hypothetical protein pr...    31   6.4  
AL157433-1|CAB75657.1|  469|Homo sapiens hypothetical protein pr...    31   6.4  
AK074638-1|BAC11105.1|  707|Homo sapiens protein ( Homo sapiens ...    31   6.4  
AK027702-1|BAB55308.1|  707|Homo sapiens protein ( Homo sapiens ...    31   6.4  

>BC065918-1|AAH65918.1|  707|Homo sapiens zinc finger, CCHC domain
           containing 8 protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +1

Query: 10  PTTTAGSDTD---VLKTPDAQQTGRVKTTDYGTPVLNIASPYRKLPSGTKFAKDICDVLY 180
           P  T G+  D   V+   D    G  K     T        +  +P  +KFA  I     
Sbjct: 616 PVNTEGALLDNGSVVPNCDISNGGSQKLFPADTSPSTATKIHSPIPDMSKFATGITP-FE 674

Query: 181 FENLPNSTGNYKKMTTLLK 237
           FEN+  STG Y ++ +LLK
Sbjct: 675 FENMAESTGMYLRIRSLLK 693


>BC017704-1|AAH17704.2|  492|Homo sapiens ZCCHC8 protein protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +1

Query: 10  PTTTAGSDTD---VLKTPDAQQTGRVKTTDYGTPVLNIASPYRKLPSGTKFAKDICDVLY 180
           P  T G+  D   V+   D    G  K     T        +  +P  +KFA  I     
Sbjct: 401 PVNTEGALLDNGSVVPNCDISNGGSQKLFPADTSPSTATKIHSPIPDMSKFATGITP-FE 459

Query: 181 FENLPNSTGNYKKMTTLLK 237
           FEN+  STG Y ++ +LLK
Sbjct: 460 FENMAESTGMYLRIRSLLK 478


>AL157434-1|CAB75658.1|  469|Homo sapiens hypothetical protein
           protein.
          Length = 469

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +1

Query: 10  PTTTAGSDTD---VLKTPDAQQTGRVKTTDYGTPVLNIASPYRKLPSGTKFAKDICDVLY 180
           P  T G+  D   V+   D    G  K     T        +  +P  +KFA  I     
Sbjct: 378 PVNTEGALLDNGSVVPNCDISNGGSQKLFPADTSPSTATKIHSPIPDVSKFATGITP-FE 436

Query: 181 FENLPNSTGNYKKMTTLLK 237
           FEN+  STG Y ++ +LLK
Sbjct: 437 FENMAESTGMYLRIRSLLK 455


>AL157433-1|CAB75657.1|  469|Homo sapiens hypothetical protein
           protein.
          Length = 469

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +1

Query: 10  PTTTAGSDTD---VLKTPDAQQTGRVKTTDYGTPVLNIASPYRKLPSGTKFAKDICDVLY 180
           P  T G+  D   V+   D    G  K     T        +  +P  +KFA  I     
Sbjct: 378 PVNTEGALLDNGSVVPNCDISNGGSQKLFPADTSPSTATKIHSPIPDMSKFATGITP-FE 436

Query: 181 FENLPNSTGNYKKMTTLLK 237
           FEN+  STG Y ++ +LLK
Sbjct: 437 FENMAESTGMYLRIRSLLK 455


>AK074638-1|BAC11105.1|  707|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90157 fis, clone HEMBB1002302. ).
          Length = 707

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +1

Query: 10  PTTTAGSDTD---VLKTPDAQQTGRVKTTDYGTPVLNIASPYRKLPSGTKFAKDICDVLY 180
           P  T G+  D   V+   D    G  K     T        +  +P  +KFA  I     
Sbjct: 616 PVNTEGALLDNGSVVPNCDISNGGSQKLFPADTSPSTATKIHSPIPDMSKFATGITP-FE 674

Query: 181 FENLPNSTGNYKKMTTLLK 237
           FEN+  STG Y ++ +LLK
Sbjct: 675 FENMAESTGMYLRIRSLLK 693


>AK027702-1|BAB55308.1|  707|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14796 fis, clone NT2RP4001235. ).
          Length = 707

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +1

Query: 10  PTTTAGSDTD---VLKTPDAQQTGRVKTTDYGTPVLNIASPYRKLPSGTKFAKDICDVLY 180
           P  T G+  D   V+   D    G  K     T        +  +P  +KFA  I     
Sbjct: 616 PVNTEGALLDNGSVVPNCDISNGGSQKLFPADTSPSTATKIHSPIPDMSKFATGITP-FE 674

Query: 181 FENLPNSTGNYKKMTTLLK 237
           FEN+  STG Y ++ +LLK
Sbjct: 675 FENMAESTGMYLRIRSLLK 693


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,217,796
Number of Sequences: 237096
Number of extensions: 2061187
Number of successful extensions: 3212
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3212
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)