Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00167
         (803 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061482-1|AAL29030.1|  553|Drosophila melanogaster LD44757p pro...    57   3e-08
AE013599-3895|AAF47224.1|  553|Drosophila melanogaster CG4622-PA...    57   3e-08
X65158-1|CAA46276.1|  469|Drosophila melanogaster developmental ...    30   3.2  
M92841-1|AAA28673.1|  469|Drosophila melanogaster LIM-homeodomai...    30   3.2  
BT005201-1|AAO61758.1|  469|Drosophila melanogaster HL02012p pro...    30   3.2  
AY069815-1|AAL39960.1|  468|Drosophila melanogaster SD05618p pro...    30   3.2  
AE013599-102|AAF57314.1|  469|Drosophila melanogaster CG8376-PA,...    30   3.2  

>AY061482-1|AAL29030.1|  553|Drosophila melanogaster LD44757p
           protein.
          Length = 553

 Score = 56.8 bits (131), Expect = 3e-08
 Identities = 27/59 (45%), Positives = 40/59 (67%)
 Frame = +1

Query: 79  KTTDYGTPVLNIASPYRKLPSGTKFAKDICDVLYFENLPNSTGNYKKMTTLLKKVKDEV 255
           K +  GTP+L   S Y +LP G+ F   + DV+ FENLP+STG Y++M  LLK V++++
Sbjct: 489 KASYEGTPLLKF-SVYDRLPVGSNFKVGVSDVINFENLPDSTGKYEQMKDLLKNVREKM 546


>AE013599-3895|AAF47224.1|  553|Drosophila melanogaster CG4622-PA,
           isoform A protein.
          Length = 553

 Score = 56.8 bits (131), Expect = 3e-08
 Identities = 27/59 (45%), Positives = 40/59 (67%)
 Frame = +1

Query: 79  KTTDYGTPVLNIASPYRKLPSGTKFAKDICDVLYFENLPNSTGNYKKMTTLLKKVKDEV 255
           K +  GTP+L   S Y +LP G+ F   + DV+ FENLP+STG Y++M  LLK V++++
Sbjct: 489 KASYEGTPLLKF-SVYDRLPVGSNFKVGVSDVINFENLPDSTGKYEQMKDLLKNVREKM 546


>X65158-1|CAA46276.1|  469|Drosophila melanogaster developmental
           regulatory protein protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -3

Query: 117 RDVEDR---SAVVRGLHSTCLLCVWCFQYIGVTTSCSSR 10
           R ++DR   SAV +  H++CL C  C Q +   +SC SR
Sbjct: 153 RQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSR 191


>M92841-1|AAA28673.1|  469|Drosophila melanogaster LIM-homeodomain
           apterous protein protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -3

Query: 117 RDVEDR---SAVVRGLHSTCLLCVWCFQYIGVTTSCSSR 10
           R ++DR   SAV +  H++CL C  C Q +   +SC SR
Sbjct: 153 RQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSR 191


>BT005201-1|AAO61758.1|  469|Drosophila melanogaster HL02012p
           protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -3

Query: 117 RDVEDR---SAVVRGLHSTCLLCVWCFQYIGVTTSCSSR 10
           R ++DR   SAV +  H++CL C  C Q +   +SC SR
Sbjct: 153 RQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSR 191


>AY069815-1|AAL39960.1|  468|Drosophila melanogaster SD05618p
           protein.
          Length = 468

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -3

Query: 117 RDVEDR---SAVVRGLHSTCLLCVWCFQYIGVTTSCSSR 10
           R ++DR   SAV +  H++CL C  C Q +   +SC SR
Sbjct: 152 RQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSR 190


>AE013599-102|AAF57314.1|  469|Drosophila melanogaster CG8376-PA,
           isoform A protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -3

Query: 117 RDVEDR---SAVVRGLHSTCLLCVWCFQYIGVTTSCSSR 10
           R ++DR   SAV +  H++CL C  C Q +   +SC SR
Sbjct: 153 RQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSR 191


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,042,605
Number of Sequences: 53049
Number of extensions: 653274
Number of successful extensions: 1362
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)