Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00166
(802 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 184 2e-47
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 106 4e-24
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 101 9e-23
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 78 2e-15
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 52 1e-07
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 47 3e-06
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 46 6e-06
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 45 1e-05
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 41 2e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.083
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 31 0.14
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.14
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 31 0.25
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 30 0.33
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 0.58
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 29 0.58
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 1.8
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 1.8
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 28 1.8
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 27 3.1
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.1
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.1
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 26 5.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 7.2
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 7.2
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 7.2
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 25 9.5
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 184 bits (447), Expect = 2e-47
Identities = 80/86 (93%), Positives = 83/86 (96%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 429
G+PRH G+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 95
Query: 430 VAPEEHPVLLTEAPLNPKANREKMTQ 507
VAPEEHP LLTEAPLNPK+NREKMTQ
Sbjct: 96 VAPEEHPCLLTEAPLNPKSNREKMTQ 121
Score = 165 bits (402), Expect = 5e-42
Identities = 78/96 (81%), Positives = 86/96 (89%)
Frame = +3
Query: 477 PQGQQREDDPDMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 656
P+ + + +FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYAL
Sbjct: 112 PKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYAL 171
Query: 657 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 764
PHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAERE
Sbjct: 172 PHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAERE 207
Score = 76.6 bits (180), Expect = 4e-15
Identities = 33/37 (89%), Positives = 36/37 (97%)
Frame = +2
Query: 149 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGSP 259
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVG P
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP 38
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 764 IVRDIKEKLCYVA 802
IVRDIKEKLCYVA
Sbjct: 208 IVRDIKEKLCYVA 220
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 106 bits (254), Expect = 4e-24
Identities = 48/86 (55%), Positives = 64/86 (74%)
Frame = +3
Query: 510 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 689
MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H + RLD+AG
Sbjct: 123 MFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAG 182
Query: 690 RDLTDYLMKILTERGYSFTTTAERES 767
RD T YL+ +L +GY+F TA+ E+
Sbjct: 183 RDATRYLISLLLRKGYAFNRTADFET 208
Score = 89.0 bits (211), Expect = 7e-19
Identities = 35/73 (47%), Positives = 56/73 (76%)
Frame = +1
Query: 292 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 471
KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P
Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109
Query: 472 LNPKANREKMTQT 510
+NP ANREKM +T
Sbjct: 110 MNPVANREKMCET 122
Score = 49.6 bits (113), Expect = 5e-07
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +2
Query: 155 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGSPAIRA 271
E A +V+DNG+G K G+A D+ PR FPSIVG P +RA
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRA 40
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 101 bits (243), Expect = 9e-23
Identities = 44/93 (47%), Positives = 67/93 (72%)
Frame = +3
Query: 513 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 692
+ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GR
Sbjct: 129 YETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGR 188
Query: 693 DLTDYLMKILTERGYSFTTTAERESFVTSRRSC 791
D+TDYL L + G+ ++AE+E + C
Sbjct: 189 DVTDYLQLQLRKSGHELVSSAEKEIVREIKEKC 221
Score = 93.5 bits (222), Expect = 3e-20
Identities = 42/87 (48%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN-EL 426
G+ +H+ VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + + +L
Sbjct: 40 GRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQL 99
Query: 427 RVAPEEHPVLLTEAPLNPKANREKMTQ 507
PEEHP+LLTE PL N+EK+ +
Sbjct: 100 NTLPEEHPLLLTEPPLANIRNKEKIAE 126
Score = 46.8 bits (106), Expect = 4e-06
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGDDAPRAVFPSIVG 253
+ +DNGSG KAGFAGDD P+ +FP+ VG
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVG 40
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2
Query: 764 IVRDIKEKLCYVA 802
IVR+IKEK CYVA
Sbjct: 213 IVREIKEKCCYVA 225
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 77.8 bits (183), Expect = 2e-15
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 11/103 (10%)
Frame = +3
Query: 486 QQREDDPD-MFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 638
+ RE+ + MFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+
Sbjct: 137 ENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPV 196
Query: 639 YEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAER 761
EGY + +I + LAGRD+T ++ +L +R S TAER
Sbjct: 197 AEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER 239
Score = 74.5 bits (175), Expect = 2e-14
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 295 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 471
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 472 LNPKANREKMTQ 507
LNP NRE +
Sbjct: 133 LNPPENRENTAE 144
Score = 41.1 bits (92), Expect = 2e-04
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGS 256
+++DNG+G K G+AG+DAP VFP+++ +
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT 37
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 51.6 bits (118), Expect = 1e-07
Identities = 27/73 (36%), Positives = 39/73 (53%)
Frame = +1
Query: 337 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQTCS 516
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K +T
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122
Query: 517 KHSTRPPCTSPSK 555
+ S R P T +K
Sbjct: 123 E-SLRCPATYLAK 134
Score = 46.0 bits (104), Expect = 6e-06
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +3
Query: 510 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 689
MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L +G
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSG 180
Query: 690 RDLTDYLMKILTERGY 737
+ D L + L ++ +
Sbjct: 181 NAINDILAQTLRDKNF 196
Score = 40.3 bits (90), Expect = 3e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 253
+EV+A+V+D GS + GF+G+D P+ V PS G
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCG 42
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 47.2 bits (107), Expect = 3e-06
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 510 MFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 683
+FE +N P++ I + S Y + + ++GIVL+ G+ SH +P+ G + R+
Sbjct: 138 LFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISW 197
Query: 684 AGRDLTDYLMKILTERGYSF 743
G + YL+K+ + SF
Sbjct: 198 GGSQSSSYLLKLFQIKYPSF 217
Score = 46.4 bits (105), Expect = 5e-06
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +1
Query: 283 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 459
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 460 TEAPLNPKANREKMTQ 507
TE NP R MT+
Sbjct: 121 TEPLANPTYVRSTMTE 136
Score = 33.1 bits (72), Expect = 0.047
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGDDAPRAVFPSIV 250
LV+DNGS +AG+ G+ P+ VF ++V
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLV 54
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 46.0 bits (104), Expect = 6e-06
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +3
Query: 513 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 692
FE P +A + ++ LYA G G+V+D G + PI +G + A +L L GR
Sbjct: 170 FEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGR 229
Query: 693 DLTDYLMKILTE 728
+T +L +L E
Sbjct: 230 YMTQHLQNLLRE 241
Score = 26.6 bits (56), Expect = 4.1
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +1
Query: 352 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQTCSK 519
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ +
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 520 HSTRPPCTSPSKP 558
P T +P
Sbjct: 172 ECQVPGFTIAYEP 184
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 44.8 bits (101), Expect = 1e-05
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 PRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 429
P + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 430 VAPEEHPVLLTEAPLNPKANREKMTQ 507
V P E+ +++TE NP++ R+++ +
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQIME 122
Score = 44.8 bits (101), Expect = 1e-05
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +3
Query: 477 PQGQQREDDPDMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 656
PQ +++ FE + PA Y+ QAV +A+ ++T +++D G + P+ +G +
Sbjct: 113 PQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLII 172
Query: 657 PHAILRLDLAGRDLTDYLMKILTERGYSF 743
I + LAG L + ++ F
Sbjct: 173 RKGIFKQSLAGDFLNANIEQLFNTMNIEF 201
Score = 36.7 bits (81), Expect = 0.004
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 253
EE+ +LV+D GS + G+AG+++P + PS G
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/49 (32%), Positives = 32/49 (65%)
Frame = +3
Query: 594 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 740
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYN 207
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.083
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 535 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 669
P T+P P T PV P S P+ P P PS++ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +1
Query: 532 PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPCPSTKDTHSPTPS 669
PP +P P P VPP S P A + P P P+ K P PS
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +1
Query: 532 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTKDTHSPTPS 669
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +1
Query: 532 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPS 669
PP +PS +P VPPV P+ P P PS P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 31.5 bits (68), Expect = 0.14
Identities = 13/64 (20%), Positives = 34/64 (53%)
Frame = +3
Query: 552 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 731
+++ + + +G + V+D G + + EG +P++ ++++ G D+T MK+L
Sbjct: 280 ESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRIKINYGGDDITLLFMKLLMRS 339
Query: 732 GYSF 743
+ +
Sbjct: 340 HFPY 343
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.5 bits (68), Expect = 0.14
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +1
Query: 502 TQTCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 669
T T ST P T S S P VPP S T + PT ST SP P+
Sbjct: 168 TSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 30.3 bits (65), Expect = 0.33
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +1
Query: 502 TQTCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 669
T T ST P T S S P VPP S T + PT ST +P P+
Sbjct: 111 TSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +1
Query: 502 TQTCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 669
T T ST P T S S P VPP S T + PT ST SP P+
Sbjct: 225 TSTSCTTSTSIP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +1
Query: 502 TQTCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 666
T T S + P + S C+ T +PP T P ST T +P P
Sbjct: 266 TSTSSTDTNSSPLPTTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPP 318
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +1
Query: 508 TCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 666
T S ++ P S S C+ T +PP T P ST T +P P
Sbjct: 322 TSSTGTSSSPLPSTSTSCTTSTS--IPPTGNSTTPVTPTVPPTSTSSTSTPPP 372
>SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 457
Score = 30.7 bits (66), Expect = 0.25
Identities = 24/91 (26%), Positives = 43/91 (47%)
Frame = -1
Query: 292 SVPYRPSRPDGGASHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFVAHLELVKLVRCR 113
SVPY PS+P+GGA G H R +++ L T N V + +L+ R
Sbjct: 87 SVPY-PSKPNGGAYQGIGFHYGRFVMNLRKALTST--------PNVTVTEATVNELL--R 135
Query: 112 CDKMKIKRPAVTANREKQIPIAGRCPCSTQC 20
+ ++ VT++++ + P+ + P + C
Sbjct: 136 DETGEVITGVVTSSKKSESPVEYKAPLTIVC 166
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 30.3 bits (65), Expect = 0.33
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 415 YNELRVAPEEHPVLLTEAPLNPK-ANREKMTQTCSKHSTRPPCTSPSKPCSRCTRPVVPP 591
Y+EL +A +E P L P PK A++ K K + S KP S+ TRP +P
Sbjct: 23 YSELPIAYQEIP--LQSLPPYPKVASKLKGVVAGGKENN---IASFQKPSSKATRPYIPS 77
Query: 592 VSCWTPATVSPTPCP 636
+ T +V P P P
Sbjct: 78 YTRLT-YSVPPLPIP 91
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 29.5 bits (63), Expect = 0.58
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 556 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 660
PC+ + PPV+C TP P C K H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 29.5 bits (63), Expect = 0.58
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -2
Query: 384 IPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHHALMAGLPTIEGNTARGASSPAK 205
+P + +V +TSFAL S L A ++ P +E + +S+PA
Sbjct: 63 LPTQEAAVETNASASHETSFALPTTSPAASLSISPTKSAAVSSEPNVEADVKSLSSTPAA 122
Query: 204 PALHIP 187
P L+ P
Sbjct: 123 PQLNSP 128
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 1.8
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +1
Query: 391 EKIWHHTFYNELRVAPEEHPVLLTE-APLNPKANREKMTQTCSKHSTRPPCTSPSKPCSR 567
E+I T E P H + T AP+ PK + Q S T P TS + P +
Sbjct: 784 EEIQRLTMLLEPHAVPPIHQIKQTGYAPVQPKTS-----QASSILPTVPRTTSYTSPYAT 838
Query: 568 CTRPVVPPVSCWTPATVSPTPCPSTKDT 651
+ + TPA V P P PST T
Sbjct: 839 TSSHI-------TPADVHPLPPPSTSTT 859
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +1
Query: 550 SKPCSRCTRPVVPPVSCWT---PATVSPTPCPSTKDTHSPTPSCVWT*PV 690
S+ S T P PP + T PA SP P + H PT S PV
Sbjct: 899 SRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPV 948
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 319 VPHLLHKSPSVPYRPSRPDGGAS 251
+ L+ K+PS PY SRP AS
Sbjct: 306 IDQLISKAPSYPYSSSRPSASAS 328
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.9 bits (59), Expect = 1.8
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Frame = +1
Query: 406 HTFYNELRVAPEEHPVLL---TEAPLNPK----ANREKMTQTCSKHSTRPPCTSPSKPCS 564
H +N +P +P L T P NP A + S+H + +PS +
Sbjct: 201 HPIHNHPYSSPTSYPPPLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINN 260
Query: 565 RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 660
P+ P ++ W P T PT P + + + P
Sbjct: 261 HTAVPLSPTLAVWLPMT-QPTFQPPSANVYQP 291
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 412 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQTCSKHSTRP 534
+Y L E+HP+LLT+ A L P+ + ++ + K P
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTP 1441
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 556 PCSRCTRPVVPPVSCWTPATVSPTPCPST 642
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 532 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 639
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 5.4
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +2
Query: 572 RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPH 724
R RS HR+ G RR P+R HL R RH + R R H
Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHLSRHH---RHSTTNYHSKRDDRYERRREH 187
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +1
Query: 466 APLNPKANREKMTQTCSKHSTRPPCTSPSKPCSRCTRPV---VPPVSCWTPATVSPTPCP 636
AP+ PKA + PP P + PV +P V+ P++V+P P
Sbjct: 1456 APVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAP 1515
Query: 637 ST 642
S+
Sbjct: 1516 SS 1517
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 194 TYRSHCLLPTRQLLRRTS*ISEI 126
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 348 FEGQDTSFALCLISYIRVLLSHTDHHA 268
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 262 GGASHDRGEHGARSIISCETGLAHTGAIV 176
GGASH E + +CE LA+ I+
Sbjct: 421 GGASHAEEEEEGEDLCNCEFSLAYGAKIL 449
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,540,220
Number of Sequences: 5004
Number of extensions: 81590
Number of successful extensions: 306
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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