Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00165
(705 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 127 8e-30
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 52 5e-07
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 49 3e-06
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 49 4e-06
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 48 6e-06
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 47 2e-05
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 44 9e-05
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 43 2e-04
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 37 0.014
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 36 0.032
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 36 0.042
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 35 0.074
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 34 0.13
SB_32525| Best HMM Match : DED (HMM E-Value=0.81) 31 1.2
SB_31767| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 30 1.6
SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 30 2.1
SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30) 29 2.8
SB_26400| Best HMM Match : RVT_1 (HMM E-Value=1.1e-30) 29 2.8
SB_55248| Best HMM Match : Adeno_E1A (HMM E-Value=7.5) 29 4.9
SB_50433| Best HMM Match : MFAP1_C (HMM E-Value=0.24) 29 4.9
SB_16585| Best HMM Match : MFAP1_C (HMM E-Value=0.24) 29 4.9
SB_2584| Best HMM Match : SPRY (HMM E-Value=0.014) 29 4.9
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 28 6.4
SB_51958| Best HMM Match : TBC (HMM E-Value=0.00039) 28 6.4
SB_30137| Best HMM Match : Phosphodiest (HMM E-Value=0) 28 6.4
SB_51159| Best HMM Match : DUF1140 (HMM E-Value=2.3) 28 8.5
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 28 8.5
SB_35518| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-09) 28 8.5
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_20634| Best HMM Match : SpoU_sub_bind (HMM E-Value=6.8) 28 8.5
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_6267| Best HMM Match : DUF930 (HMM E-Value=3.6) 28 8.5
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 127 bits (307), Expect = 8e-30
Identities = 73/238 (30%), Positives = 121/238 (50%), Gaps = 5/238 (2%)
Frame = +2
Query: 2 FSHETASKIFGGKIKYHLLIFLSKKNGDFEKYLEDLKPVAKTYRDRIMTVAIDADEDEHQ 181
FS ETA KIFGG +K+H+L+F +K + F+ E AK ++ +++ V ++ + +++Q
Sbjct: 256 FSDETAPKIFGGDVKHHILLFTNKTSDGFKATHEAFTGGAKDFKGKVLFVYVNTEVEDNQ 315
Query: 182 RILEFFGMKKDEVPSARLIAL-EQDRPNTSPAVMSCRLTLLRNSFNRSSTAP*SSIC*AR 358
RI+EFFG++ E+P+ RLI L + D P ++ +
Sbjct: 316 RIVEFFGIQSSELPTIRLINLADDDMTKYKPTAAEITSENVKEFVQAFLDKKLKPHLLSA 375
Query: 359 TCPRTGPPNPSKCSSPPTLTKCLRHN*EGPRRILRSLVRP----LQTAGPYLRQLGEHFE 526
P P K + R+ + + P + P QLGE ++
Sbjct: 376 EIPEDWDSKPVKVLCGKNFDEVARNK---DKNVFVEFYAPWCGHCKQLAPIWDQLGEKYK 432
Query: 527 NDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETDGE 700
+ D+++AK+D+TANE+E K+ SFPTIK + K+ + DYNG RTL KF+E+ G+
Sbjct: 433 DHADIVVAKMDSTANEVEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLESGGK 490
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = +1
Query: 259 KYKPSSNELSPNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEV 423
KYKP++ E++ ++EFVQ+F D LK HLLS ++P DW +KPVKVL NFDEV
Sbjct: 343 KYKPTAAEITSENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEV 397
Score = 51.6 bits (118), Expect = 6e-07
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVPIYD 506
K V VEFYAPWCGHCKQL PI+D
Sbjct: 403 KNVFVEFYAPWCGHCKQLAPIWD 425
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
K VLVEFYAPWCGHCK L P Y +A L+
Sbjct: 42 KHVLVEFYAPWCGHCKALAPEYAKAAGQLK 71
Score = 35.5 bits (78), Expect = 0.042
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 488 AGPYLRQLGEHFENDDDVIIAKIDATANEL--EHTKITSFPTIKLYSKDNQVHDYNGERT 661
A Y + G+ ++ +AK+DATA E ++ +PTIK + KD + +Y G RT
Sbjct: 60 APEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFF-KDGKPSEYAGGRT 118
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Frame = +2
Query: 494 PYLRQLGEHFENDDDVIIAKIDATANELEHT-KITSFPTIKL-YSKDNQ-VHDYNGERTL 664
P ++LG+HF ND +++IAKIDATAN++ T + FPTI SKD + ++G R L
Sbjct: 561 PTFKKLGKHFRNDKNIVIAKIDATANDVPSTYAVEGFPTIYFATSKDKKNPIKFDGGREL 620
Query: 665 AGLTKFVE 688
L KFVE
Sbjct: 621 KDLIKFVE 628
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVPIYDNSASTLR 527
+LVEF+APWCGHCKQL P Y+ +A L+
Sbjct: 196 MLVEFFAPWCGHCKQLAPEYEKAAQELQ 223
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V + +LVEFYAPWCGHCK L P Y +A ++
Sbjct: 74 VIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMK 108
Score = 34.3 bits (75), Expect = 0.098
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCG 476
V D K VL+EFYAPWCG
Sbjct: 539 VNDPKKDVLIEFYAPWCG 556
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V D TK VL+EFYAPWCGHCK L P Y+ L+
Sbjct: 876 VNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKLQ 910
Score = 48.8 bits (111), Expect = 4e-06
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVPIYDNSASTLR 527
+LVEF+APWCGHCK+L P Y+ +A L+
Sbjct: 558 MLVEFFAPWCGHCKRLAPEYETAAEALK 585
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +2
Query: 524 ENDDDVIIAKIDAT-ANELEHTK--ITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVE 688
+ND V +AK+D T A + +K ++ +PT+K++ DY+G R +G+ ++++
Sbjct: 586 KNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMK 643
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 494 PYLRQLGEHFENDDDVIIAKIDATANE 574
P +LGE ++ D++IAK+DATAN+
Sbjct: 900 PKYNELGEKLQDVKDIVIAKMDATAND 926
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYD 506
V + K LVEFYAPWCGHCKQL P Y+
Sbjct: 35 VVNGEKFALVEFYAPWCGHCKQLAPTYE 62
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +2
Query: 494 PYLRQLGEHFENDDDVIIAKIDATAN-EL-EHTKITSFPTIKLYSKDNQV-HDYNGERTL 664
P QLGE + DVIIAK+DA + +L + FPTIK + K + +YNG R +
Sbjct: 59 PTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDI 118
Query: 665 AGLTKFVE 688
KF+E
Sbjct: 119 NDFIKFIE 126
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 48.8 bits (111), Expect = 4e-06
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVPIYDNSASTLR 527
+LVEF+APWCGHCK+L P Y+ +A L+
Sbjct: 33 MLVEFFAPWCGHCKRLAPEYETAAEALK 60
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 48.4 bits (110), Expect = 6e-06
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 429 DTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
+ T+ VLV FYAPWCGHCK P Y+ +A T +
Sbjct: 162 NNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFK 194
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVPIYDNSASTL 524
+ VLV ++APWCGHC ++ P Y +A L
Sbjct: 68 ENVLVMYFAPWCGHCNEMKPNYYKAAQVL 96
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 482 QTAGPYLRQLGEHFENDDDVIIAKIDAT--ANELEHTKITSFPTIKLYSKDNQVHDYNGE 655
+ A P + E F++ + + AK+D T + + ++ +PT++ Y V +Y+G+
Sbjct: 180 KNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGD 239
Query: 656 RTLAGLTKFVE 688
R L F+E
Sbjct: 240 RVTEDLISFME 250
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVPIYDNSASTLR 527
VLV FYAPWCGHCK + P Y ++A TL+
Sbjct: 102 VLVMFYAPWCGHCKAMKPEYVDAAQTLK 129
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVP 497
K VLV FYAPWCGHCK+ P
Sbjct: 213 KHVLVMFYAPWCGHCKKAKP 232
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = +3
Query: 429 DTTKK---VLVEFYAPWCGHCKQLVPIYDNSASTLR 527
+T KK VLV+FYAPWC C++L P++D +A LR
Sbjct: 63 ETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLR 98
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVPIYDNSASTL 524
K VLV+FYAPWC HCK++ P Y + A L
Sbjct: 152 KFVLVDFYAPWCFHCKKMAPDYKDVAKEL 180
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 447 LVEFYAPWCGHCKQLVPIYDNSASTLR 527
LVEF+APWCGHC++L P + +A+ L+
Sbjct: 101 LVEFFAPWCGHCQRLAPEWAKAATELK 127
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 590 ITSFPTIKLYSKD-NQVHDYNGERTLAGL 673
I FPTIK++ + N DYNG+RT G+
Sbjct: 13 IRGFPTIKIFGANKNSPQDYNGQRTAQGI 41
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 41.5 bits (93), Expect = 6e-04
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVPIYDNSASTL 524
+LV+FYAPWC HC++L+P + +A+ L
Sbjct: 40 MLVDFYAPWCHHCQELLPQLEGAANAL 66
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +2
Query: 548 AKIDATANE----LEHTKITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVET 691
AK+D T ++ KI +P++KL+ DY G+RT A L ++E+
Sbjct: 75 AKVDCTDPRSKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMES 126
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 37.9 bits (84), Expect = 0.008
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 447 LVEFYAPWCGHCKQLVPIYDNSASTLR 527
+V+FYAPWCG C + P Y+ A L+
Sbjct: 455 VVDFYAPWCGPCMRFAPKYEQLAKMLK 481
Score = 34.7 bits (76), Expect = 0.074
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 420 SVFDTTKKVLVEFYAPWCGHCKQLVPIYDNSA 515
SV ++ V+F+APWC C +L+P Y +A
Sbjct: 297 SVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAA 328
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVPIYDNSASTL 524
+LV+FYAPWC C L P Y+ +A L
Sbjct: 42 MLVDFYAPWCSDCDNLRPKYEKAARDL 68
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 37.1 bits (82), Expect = 0.014
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 450 VEFYAPWCGHCKQLVPIYDNSASTLR 527
V+FYAPWC HC +L PI++ A +
Sbjct: 111 VKFYAPWCIHCIKLAPIWERLAEDFK 136
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 584 TKITSFPTIKLYSKDNQVHDYNGERTLAGLTKFV 685
+KI +PT+ L+ Q +Y+G R L L +F+
Sbjct: 144 SKINGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 420 SVFDTTKK--VLVEFYAPWCGHCKQLVPIYDNSA 515
SV + TK V+++FYA WCG C+Q+ P + A
Sbjct: 23 SVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA 56
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 35.9 bits (79), Expect = 0.032
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 435 TKKVLVEFYAPWCGHCKQLVPIY 503
TK V+ +F A WCG CK + P+Y
Sbjct: 27 TKLVVADFTASWCGPCKSIAPVY 49
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 35.5 bits (78), Expect = 0.042
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 429 DTTKKVLVEFYAPWCGHCKQLVPIYDNSA 515
D +K V + FYAPW HC++++ I+D A
Sbjct: 41 DGSKFVFIFFYAPWDDHCQRILQIFDQVA 69
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 34.7 bits (76), Expect = 0.074
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 435 TKKVLVEFYAPWCGHCKQLVPIYDN 509
++ V+++F A WCG CK + P++ N
Sbjct: 28 SRLVVIDFTATWCGPCKSIAPVFTN 52
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +2
Query: 494 PYLRQLGEHFENDDDVIIAKIDATANELE-HTKITSFPTIKLY---SKDNQV-HDYNGER 658
P L + F++ V + +IDA N+L + ++S+P+I L+ KD+ + N R
Sbjct: 555 PVLLAVARFFQDISQVSVTRIDADQNDLPWNLTVSSYPSIILFPAGRKDSSIAFPSNTPR 614
Query: 659 TLAGLTKFVETDG 697
T L +F+E G
Sbjct: 615 TATRLIEFIEEHG 627
Score = 32.7 bits (71), Expect = 0.30
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPI 500
V + + VL+ FY PWCG C P+
Sbjct: 531 VINNDQDVLLVFYTPWCGMCINFAPV 556
>SB_32525| Best HMM Match : DED (HMM E-Value=0.81)
Length = 372
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 2 FSHETASKIFGGKIKYHLLIFLSKKNGDFEKYLEDLKPVAKTYRDRIMTVAIDADE 169
F H+T SK K H + F + GD E LK + TY R+ + + +E
Sbjct: 178 FMHQTLSKKESRKRPAHDVPFYTSNQGDIEDLRGSLKVLKPTYETRVDALRKETEE 233
>SB_31767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = -3
Query: 439 LVVSKTLRQSWRRRAL*RVWRPSPRAGPRSADAASGCRRRTIERIP 302
+VV TL + RR +L R W PR G D G R+R+I RIP
Sbjct: 144 VVVFTTLHRQKRRMSLERKWTLDPRTG---NDHLQG-RKRSIRRIP 185
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 450 VEFYAPWCGHCKQLVPIYDNSASTL 524
V FYAPWCG ++ V ++ +AS L
Sbjct: 457 VFFYAPWCGQSRRAVEEFNIAASLL 481
>SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 1213
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 101 QGISRSRHFSWIRR*EGGI*SFHQRSWKQF 12
+ + ++HFS I + G SFH +SWK F
Sbjct: 965 ESVQANKHFSVILKRFDGSVSFHDKSWKDF 994
>SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30)
Length = 1152
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 515 EHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDYNGERTLAGL 673
EHF+ ++A ++ TAN ++ T + Y +D Q HD ER L L
Sbjct: 532 EHFQKRMTSVLAGVEGTANMIDDTLV--------YGRDQQEHDERLERVLKKL 576
>SB_26400| Best HMM Match : RVT_1 (HMM E-Value=1.1e-30)
Length = 1084
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 515 EHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDYNGERTLAGL 673
EHF+ ++A ++ TAN ++ T + Y +D Q HD ER L L
Sbjct: 913 EHFQKRMTSVLAGVEGTANMIDDTLV--------YGRDQQEHDERLERVLKKL 957
>SB_55248| Best HMM Match : Adeno_E1A (HMM E-Value=7.5)
Length = 198
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 365 PRTGPPNPSKCSSPPTLTKCLRHN 436
PRT PP P+ +PP L + LRHN
Sbjct: 148 PRTPPPEPTPPPTPPPL-RPLRHN 170
>SB_50433| Best HMM Match : MFAP1_C (HMM E-Value=0.24)
Length = 536
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 32 GGKIKYHLLIFLSKKNGDFE-KYLEDLKPVAKTYRDRIMTVAIDADEDEHQRILEFFGMK 208
GGKI L+ ++ +NGD E K +E +P K T A++A++ Q+I +
Sbjct: 326 GGKIVKTDLMIVNVRNGDREKKTVEQKEPTKKE------TKAMEANKSAEQKIKKEDPKA 379
Query: 209 KDEVPSARLIALEQDR 256
KD + + L +D+
Sbjct: 380 KDTKEEIQAVKLREDK 395
>SB_16585| Best HMM Match : MFAP1_C (HMM E-Value=0.24)
Length = 387
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 32 GGKIKYHLLIFLSKKNGDFE-KYLEDLKPVAKTYRDRIMTVAIDADEDEHQRILEFFGMK 208
GGKI L+ ++ +NGD E K +E +P K T A++A++ Q+I +
Sbjct: 177 GGKIVKTDLMIVNVRNGDREKKTVEQKEPTKKE------TKAMEANKSAEQKIKKEDPKA 230
Query: 209 KDEVPSARLIALEQDR 256
KD + + L +D+
Sbjct: 231 KDTKEEIQAVKLREDK 246
>SB_2584| Best HMM Match : SPRY (HMM E-Value=0.014)
Length = 408
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 497 YLRQLGEHFENDDDVIIAKI 556
YL + GEHF DD IAK+
Sbjct: 95 YLEKFGEHFPGQDDANIAKV 114
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = +1
Query: 19 FQDLW-WKD--QIPPSYLLIQEKWRLR 90
F D W WK+ +IPP YL ++E W +R
Sbjct: 431 FPDNWHWKNNRRIPPLYLDVEEGWLMR 457
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 447 LVEFYAPWCGHCKQLVPIYDNSA 515
+V F+APW HC Q+ + + A
Sbjct: 25 VVHFFAPWAPHCNQMNDVLEELA 47
>SB_51958| Best HMM Match : TBC (HMM E-Value=0.00039)
Length = 491
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 2 FSHETASKIFGGKIKYHLLIFLSKKNGDFEKYL 100
FSH S++F K +L +S+KN +F+K+L
Sbjct: 87 FSHGRKSRLFSCKFDGCMLSKISQKNENFDKHL 119
>SB_30137| Best HMM Match : Phosphodiest (HMM E-Value=0)
Length = 655
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = +1
Query: 19 FQDLW-WKD--QIPPSYLLIQEKWRLR 90
F D W WK+ +IPP YL ++E W +R
Sbjct: 333 FPDNWHWKNNRRIPPLYLDVEEGWLMR 359
>SB_51159| Best HMM Match : DUF1140 (HMM E-Value=2.3)
Length = 444
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 158 DADEDEHQRILEFFGMKKDEVPSARLIALEQDRPNT-SPAVMSCRLTLLRNSFNRS 322
DADE+E L+ F ++DE L+ Q +T + AV CR S + S
Sbjct: 368 DADEEEFNETLDMFDAEEDEYIDLVLMEFNQFLADTITRAVKRCRSPTFDESSDES 423
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 27.9 bits (59), Expect = 8.5
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +3
Query: 450 VEFYAPWCGHCKQLVPIYDNSASTLR 527
++F A WCG C+ + P ++ A +
Sbjct: 16 IDFTATWCGPCRMIGPKFEEMAKEFK 41
>SB_35518| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-09)
Length = 385
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 16 CFQDLWWKDQIPPSYLLIQEKWRL 87
C ++L W D++ Y + EKWRL
Sbjct: 269 CKENLGWDDEVSDLYRVRWEKWRL 292
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 590 ITSFPTIKLYSKDNQVHDYNGERTLAGLTKFV 685
I +PT+ L+ Q +Y+G R L L +F+
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_20634| Best HMM Match : SpoU_sub_bind (HMM E-Value=6.8)
Length = 84
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 41 IKYHLLIFLSKKN--GDFEKYLEDLKPVAKTYRDRIMTVAIDADEDEHQRI-LEFF 199
I+ +L +L K + GD E+ LE K + K R+ + VA + ++H + EFF
Sbjct: 19 IRQNLSSWLEKLSCDGDVERKLEYKKKLVKKLRESPIAVATEQANEQHYEVPTEFF 74
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +2
Query: 95 YLEDLKPVAKTYRDRIMTVAIDADEDEHQRILEFFGM---KKDEVP-SARLIALEQDRPN 262
Y+ + +A+ R+ + DAD +EHQ +E G+ +E P SA +I ++ D+
Sbjct: 659 YMVEAPEIAEM-ESRVASSVKDADTEEHQSPMELSGVDTNASEENPQSAEVIEIQPDQVQ 717
Query: 263 TSPAVMSCR 289
P + R
Sbjct: 718 EKPKGLKFR 726
>SB_6267| Best HMM Match : DUF930 (HMM E-Value=3.6)
Length = 502
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 401 SPPTLTKCLRHN*EGPRR 454
SPP L +C+R + +GPRR
Sbjct: 75 SPPDLDRCIRESGKGPRR 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,371,685
Number of Sequences: 59808
Number of extensions: 409235
Number of successful extensions: 1208
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -