Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00165
(705 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 55 5e-08
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 55 5e-08
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 55 5e-08
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 52 3e-07
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 52 3e-07
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 50 1e-06
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 50 1e-06
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 50 2e-06
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 48 6e-06
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 48 8e-06
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 44 7e-05
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 42 4e-04
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 41 7e-04
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 41 7e-04
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 41 7e-04
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 41 0.001
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 40 0.001
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 39 0.004
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 38 0.006
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 37 0.015
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 36 0.035
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 35 0.046
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 35 0.060
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 35 0.060
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 33 0.24
At4g37200.1 68417.m05266 thioredoxin family protein contains Pfa... 32 0.43
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 32 0.43
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 32 0.43
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 32 0.43
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 32 0.43
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 31 0.74
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 31 0.98
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 31 0.98
At4g21120.1 68417.m03054 amino acid permease family protein simi... 31 0.98
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 31 0.98
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 31 0.98
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 30 1.3
At5g55920.1 68418.m06975 nucleolar protein, putative similar to ... 30 1.7
At3g42410.1 68416.m04385 replication protein-related weak simila... 30 1.7
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 30 1.7
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 29 2.3
At5g05840.1 68418.m00642 expressed protein contains Pfam profile... 29 2.3
At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / P... 29 2.3
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 29 2.3
At1g79420.1 68414.m09255 expressed protein contains Pfam profile... 29 2.3
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 29 2.3
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 29 3.0
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 29 3.0
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 29 3.0
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 29 3.0
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 29 4.0
At3g14960.1 68416.m01892 galactosyltransferase family protein co... 29 4.0
At3g10845.1 68416.m01306 RNA recognition motif (RRM)-containing ... 29 4.0
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 29 4.0
At1g15020.2 68414.m01795 thioredoxin family protein low similari... 29 4.0
At1g15020.1 68414.m01794 thioredoxin family protein low similari... 29 4.0
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 28 5.2
At2g41720.1 68415.m05157 pentatricopeptide (PPR) repeat-containi... 28 5.2
At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / P... 28 6.9
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 28 6.9
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 28 6.9
At1g15310.1 68414.m01832 signal recognition particle 54 kDa prot... 28 6.9
At1g11040.1 68414.m01265 DNAJ chaperone C-terminal domain-contai... 28 6.9
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 27 9.2
At3g24495.1 68416.m03072 DNA mismatch repair protein MSH6-2 (MSH... 27 9.2
At2g45900.1 68415.m05708 expressed protein 27 9.2
At2g05290.1 68415.m00557 expressed protein similar to zinc finge... 27 9.2
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 27 9.2
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 54.8 bits (126), Expect = 5e-08
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V D K VLVEFYAPWCGHCK L P Y+ A+ +
Sbjct: 155 VLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFK 189
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +2
Query: 482 QTAGPYLRQLGEHFENDDDVIIAKIDATANEL--EHTKITSFPTIKLYSKDNQV-HDYNG 652
++ P ++ F+ ++ V+IA +DA A++ E ++ FPT+K + KDN+ HDY+G
Sbjct: 175 KSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDG 234
Query: 653 ERTLAGLTKFV 685
R L F+
Sbjct: 235 GRDLDDFVSFI 245
Score = 47.6 bits (108), Expect = 8e-06
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
K LVEFYAPWCGHCK+L P Y+ ++ +
Sbjct: 41 KGALVEFYAPWCGHCKKLAPEYEKLGASFK 70
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 54.8 bits (126), Expect = 5e-08
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V D K VLVEFYAPWCGHCK L P Y+ A+ +
Sbjct: 155 VLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFK 189
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +2
Query: 482 QTAGPYLRQLGEHFENDDDVIIAKIDATANEL--EHTKITSFPTIKLYSKDNQV-HDYNG 652
++ P ++ F+ ++ V+IA +DA A++ E ++ FPT+K + KDN+ HDY+G
Sbjct: 175 KSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDG 234
Query: 653 ERTLAGLTKFV 685
R L F+
Sbjct: 235 GRDLDDFVSFI 245
Score = 47.6 bits (108), Expect = 8e-06
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
K LVEFYAPWCGHCK+L P Y+ ++ +
Sbjct: 41 KGALVEFYAPWCGHCKKLAPEYEKLGASFK 70
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 54.8 bits (126), Expect = 5e-08
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 482 QTAGPYLRQLGEHFENDDDVIIAKIDATANEL--EHTKITSFPTIKLYSKDNQVHDYNGE 655
Q P L ++ F+ND VIIAK+DATAN++ + + FPTI S V Y G+
Sbjct: 406 QKLAPILDEVALSFQNDPSVIIAKLDATANDIPSDTFDVKGFPTIYFRSASGNVVVYEGD 465
Query: 656 RTLAGLTKFVETDGE 700
RT FVE + E
Sbjct: 466 RTKEDFINFVEKNSE 480
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSA 515
VF + K VL+EFYAPWCGHC++L PI D A
Sbjct: 386 VFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
Score = 48.8 bits (111), Expect = 3e-06
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVPIYDNSASTL 524
++VEFYAPWCGHC++L P Y+ +AS L
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASEL 75
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 52.4 bits (120), Expect = 3e-07
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVPIYDNSASTL 524
++VEFYAPWCGHCKQL P Y+ +AS L
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASAL 76
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSA 515
V ++ K VL+EFYAPWCGHC++L PI D A
Sbjct: 388 VLNSGKNVLLEFYAPWCGHCQKLAPILDEVA 418
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 482 QTAGPYLRQLGEHFENDDDVIIAKIDATANEL--EHTKITSFPTIKLYSKDNQVHDYNGE 655
Q P L ++ +++D V+IAK+DATAN+ + + FPTI S V Y G+
Sbjct: 408 QKLAPILDEVAVSYQSDSSVVIAKLDATANDFPKDTFDVKGFPTIYFKSASGNVVVYEGD 467
Query: 656 RTLAGLTKFV 685
R L F+
Sbjct: 468 RQRESLYLFI 477
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 52.4 bits (120), Expect = 3e-07
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVPIYDNSASTL 524
++VEFYAPWCGHCKQL P Y+ +AS L
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASAL 76
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSA 515
V ++ K VL+EFYAPWCGHC++L PI D A
Sbjct: 388 VLNSGKNVLLEFYAPWCGHCQKLAPILDEVA 418
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 482 QTAGPYLRQLGEHFENDDDVIIAKIDATANEL--EHTKITSFPTIKLYSKDNQVHDYNGE 655
Q P L ++ +++D V+IAK+DATAN+ + + FPTI S V Y G+
Sbjct: 408 QKLAPILDEVAVSYQSDSSVVIAKLDATANDFPKDTFDVKGFPTIYFKSASGNVVVYEGD 467
Query: 656 RTLAGLTKFVE 688
RT FV+
Sbjct: 468 RTKEDFISFVD 478
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V D +K VL+E YAPWCGHC+ L P+Y+ A LR
Sbjct: 455 VLDDSKDVLLEVYAPWCGHCQALEPMYNKLAKHLR 489
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 FSHETASKIFGGKIKYHLLIFLSKKNGDFEKYLEDLKPVAKTYRDRIMTVAIDAD-EDEH 178
F+ ETA +IF IK LL+F++K + EK L + + AK+++ +++ V++D D ED
Sbjct: 318 FTRETAPEIFESAIKKQLLLFVTK--NESEKVLTEFQEAAKSFKGKLIFVSVDLDNEDYG 375
Query: 179 QRILEFFGM 205
+ + E+FG+
Sbjct: 376 KPVAEYFGV 384
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V + + VLVEFYAPWCGHC+ L P Y +A+ L+
Sbjct: 116 VIENNQYVLVEFYAPWCGHCQSLAPEYAAAATELK 150
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 482 QTAGPYLRQLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHD 643
Q P +L +H + D ++I K+D T NE K FPTI + N+ +
Sbjct: 475 QALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILFFPAGNKTSE 528
Score = 35.5 bits (78), Expect = 0.035
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +2
Query: 530 DDDVIIAKIDAT-ANEL-EHTKITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVE 688
+D V++AKIDAT NEL + ++ FPT+ L+ D + Y G RT + +V+
Sbjct: 151 EDGVVLAKIDATEENELAQEYRVQGFPTL-LFFVDGEHKPYTGGRTKETIVTWVK 204
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 280 ELSPNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEV 423
E+ + I+ F + F + LK S+ +P + + VK++V NFDE+
Sbjct: 408 EIQSDKIKIFGEDFLNDKLKPFYKSDPIP-EKNDEDVKIVVGDNFDEI 454
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V D +K VL+E YAPWCGHC+ L P+Y+ A LR
Sbjct: 455 VLDDSKDVLLEVYAPWCGHCQALEPMYNKLAKHLR 489
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 FSHETASKIFGGKIKYHLLIFLSKKNGDFEKYLEDLKPVAKTYRDRIMTVAIDAD-EDEH 178
F+ ETA +IF IK LL+F++K + EK L + + AK+++ +++ V++D D ED
Sbjct: 318 FTRETAPEIFESAIKKQLLLFVTK--NESEKVLTEFQEAAKSFKGKLIFVSVDLDNEDYG 375
Query: 179 QRILEFFGM 205
+ + E+FG+
Sbjct: 376 KPVAEYFGV 384
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V + + VLVEFYAPWCGHC+ L P Y +A+ L+
Sbjct: 116 VIENNQYVLVEFYAPWCGHCQSLAPEYAAAATELK 150
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +2
Query: 482 QTAGPYLRQLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHD---YNG 652
Q P +L +H + D ++I K+D T NE K FPTI + N+ + +
Sbjct: 475 QALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILFFPAGNKTSEPITVDT 534
Query: 653 ERTLAGLTKFV 685
+RT+ KF+
Sbjct: 535 DRTVVAFYKFL 545
Score = 35.5 bits (78), Expect = 0.035
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +2
Query: 530 DDDVIIAKIDAT-ANEL-EHTKITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVE 688
+D V++AKIDAT NEL + ++ FPT+ L+ D + Y G RT + +V+
Sbjct: 151 EDGVVLAKIDATEENELAQEYRVQGFPTL-LFFVDGEHKPYTGGRTKETIVTWVK 204
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 280 ELSPNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEV 423
E+ + I+ F + F + LK S+ +P + + VK++V NFDE+
Sbjct: 408 EIQSDKIKIFGEDFLNDKLKPFYKSDPIP-EKNDEDVKIVVGDNFDEI 454
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V ++ VLVEF+APWCGHC+ L P ++ ASTL+
Sbjct: 42 VLNSNGVVLVEFFAPWCGHCQSLTPTWEKVASTLK 76
Score = 44.8 bits (101), Expect = 6e-05
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 447 LVEFYAPWCGHCKQLVPIYDNSASTLR 527
+VEF+APWCGHCK+L P + +A+ L+
Sbjct: 185 IVEFFAPWCGHCKKLAPEWKKAANNLK 211
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 545 IAKIDATANEL--EHTKITSFPTIKLYSKDNQVHDYNGERTLAGLTKF 682
+A IDA A++ + + FPTIK++ DY G R +++F
Sbjct: 81 VAAIDADAHKSVSQDYGVRGFPTIKVFVPGKPPIDYQGARDAKSISQF 128
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 48.0 bits (109), Expect = 6e-06
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V D +K VL+E YAPWCGHC+ PIY+ L+
Sbjct: 451 VLDESKDVLLEIYAPWCGHCQSFEPIYNKLGKYLK 485
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +2
Query: 482 QTAGPYLRQLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHD---YNG 652
Q+ P +LG++ + D +++AK+D T+NE K FPTI + N+ D +
Sbjct: 471 QSFEPIYNKLGKYLKGIDSLVVAKMDGTSNEHPRAKADGFPTILFFPGGNKSFDPIAVDV 530
Query: 653 ERTLAGLTKFVE 688
+RT+ L KF++
Sbjct: 531 DRTVVELYKFLK 542
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 FSHETASKIFGGKIKYHLLIFLSKKNGDFEKYLEDLKPVAKTYRDRIMTVAIDAD-EDEH 178
F+ E AS IF +K L++F K + EK+L L+ VAK+++ + + V + D ED
Sbjct: 314 FTREGASLIFESSVKNQLILFA--KANESEKHLPTLREVAKSFKGKFVFVYVQMDNEDYG 371
Query: 179 QRILEFFGM 205
+ + FFG+
Sbjct: 372 EAVSGFFGV 380
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 447 LVEFYAPWCGHCKQLVPIYDNSASTLR 527
+VEFYAPWCG C+ L P Y +A+ L+
Sbjct: 120 MVEFYAPWCGACQALTPEYAAAATELK 146
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 545 IAKIDAT--ANELEHTKITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVE 688
+AKIDAT + + +I FPT+ L+ Y GERT G+ +++
Sbjct: 151 LAKIDATEEGDLAQKYEIQGFPTVFLFVDGEMRKTYEGERTKDGIVTWLK 200
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 280 ELSPNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEV 423
EL+ N I+ + F LK S+ LP + VKV+V NFDE+
Sbjct: 404 ELTVNNIKTLAEDFLADKLKPFYKSDPLPENNDGD-VKVIVGNNFDEI 450
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V ++ VLVEF+APWCGHCK L P ++ A+ L+
Sbjct: 44 VLNSNGVVLVEFFAPWCGHCKALTPTWEKVANILK 78
Score = 45.2 bits (102), Expect = 4e-05
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V ++ + +VEF+APWCGHCK+L P + +A L+
Sbjct: 176 VIESNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQ 210
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 545 IAKIDATANE--LEHTKITSFPTIKLYSKDNQVHDYNGERTLAGLTKF 682
+A IDA A++ + I FPTIK++ DY G R + F
Sbjct: 83 VAAIDADAHQSAAQDYGIKGFPTIKVFVPGKAPIDYQGARDAKSIANF 130
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +3
Query: 420 SVFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTL 524
S T + V+FYAPWCGHCK+L P D +A L
Sbjct: 44 SAISTFDCIFVDFYAPWCGHCKRLNPELDAAAPIL 78
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 429 DTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
++ K VLV+FYA WCG C+ +VPI + + TL+
Sbjct: 74 NSDKPVLVDFYATWCGPCQLMVPILNEVSETLK 106
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 491 GPYLRQLGEHFENDDDVIIAKIDATANELEHTKIT--SFPTIKLYSKDNQVHDYNGERTL 664
G LG+ E DD++ + ++D + TK+ S+PT L+ +V Y G+R +
Sbjct: 62 GNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDV 121
Query: 665 AGLTKFVETDGE 700
L FV + E
Sbjct: 122 ESLKAFVVEETE 133
Score = 29.5 bits (63), Expect = 2.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 450 VEFYAPWCGHCKQLVPIYDN 509
V+F PWC HCK+L ++++
Sbjct: 48 VKFCVPWCKHCKKLGNLWED 67
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 491 GPYLRQLGEHFENDDDVIIAKIDATANELEHTKIT--SFPTIKLYSKDNQVHDYNGERTL 664
G LG+ E DD++ + ++D + TK+ S+PT L+ +V Y G+R +
Sbjct: 62 GNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDV 121
Query: 665 AGLTKFVETDGE 700
L FV + E
Sbjct: 122 ESLKAFVVEETE 133
Score = 29.5 bits (63), Expect = 2.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 450 VEFYAPWCGHCKQLVPIYDN 509
V+F PWC HCK+L ++++
Sbjct: 48 VKFCVPWCKHCKKLGNLWED 67
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 491 GPYLRQLGEHFENDDDVIIAKIDATANELEHTKIT--SFPTIKLYSKDNQVHDYNGERTL 664
G LG+ E DD++ + ++D + TK+ S+PT L+ +V Y G+R +
Sbjct: 62 GNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDV 121
Query: 665 AGLTKFVETDGE 700
L FV + E
Sbjct: 122 ESLKAFVVEETE 133
Score = 29.5 bits (63), Expect = 2.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 450 VEFYAPWCGHCKQLVPIYDN 509
V+F PWC HCK+L ++++
Sbjct: 48 VKFCVPWCKHCKKLGNLWED 67
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSA 515
V ++ VLVEF+APWCG C+ + PI D A
Sbjct: 100 VLESDVPVLVEFWAPWCGPCRMIHPIVDQLA 130
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +3
Query: 429 DTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
++ K VLV++YA WCG C+ +VPI + + TL+
Sbjct: 79 NSDKPVLVDYYATWCGPCQFMVPILNEVSETLK 111
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +2
Query: 500 LRQLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLY 619
+ +L +HF+ ++++ A+IDA+ANE + +PTI LY
Sbjct: 456 VEKLSQHFKGFENLVFARIDASANEHPKLTVDDYPTILLY 495
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
+ D + V+V YAPWC +L+P + +A+ L+
Sbjct: 88 LIDGNEYVMVLGYAPWCARSAELMPRFAEAATDLK 122
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +1
Query: 256 AKYKPSSNELSPNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFDEV 423
+KY S+ SP+ IEEF GT+ + S+ +P + A V V V FDEV
Sbjct: 376 SKYLLESDP-SPSNIEEFCFGLAHGTVSAYYKSQPIPDNQNASVVAV-VGRTFDEV 429
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSA 515
V T V+V+F+APWCG CK + P+ ++ A
Sbjct: 94 VLKATGPVVVDFWAPWCGPCKMIDPLVNDLA 124
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSA 515
V + V V+F+APWCG CK + PI + A
Sbjct: 88 VLKADEPVFVDFWAPWCGPCKMIDPIVNELA 118
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 35.5 bits (78), Expect = 0.035
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 429 DTTKKVLVEFYAPWCGHCKQLVPIYDNSAS 518
DT K +++EF A WCG CK L P + A+
Sbjct: 57 DTNKLLVIEFTAKWCGPCKTLEPKLEELAA 86
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 35.1 bits (77), Expect = 0.046
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 420 SVFDTTKKVLVEFYAPWCGHCKQLVP 497
+V ++ + VLVEF A WCG CK + P
Sbjct: 82 TVLESAQPVLVEFVATWCGPCKLIYP 107
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 34.7 bits (76), Expect = 0.060
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 420 SVFDTTKKVLVEFYAPWCGHCKQLVPIYDNSA 515
SV + VLVEFY WCG C+ + I D A
Sbjct: 79 SVLKSETPVLVEFYTSWCGPCRMVHRIIDEIA 110
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Frame = +2
Query: 500 LRQLGEHFENDDDVIIAKIDATANELEHTKI---TSFPTIKLY 619
+ +L +HF+ ++++ A+IDA+AN EHTK+ +P I LY
Sbjct: 457 IEKLAKHFKGFENLVFARIDASAN--EHTKLQVDDKYPIILLY 497
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 423 VFDTTKKVLVEFYAPWCGHCKQLVPIYDNSASTLR 527
V D + V+V YAPWC +L+P + +A+ L+
Sbjct: 90 VIDGNEFVMVLGYAPWCARSAELMPRFAEAATALK 124
Score = 31.9 bits (69), Expect = 0.43
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +1
Query: 256 AKYKPSSNELSPNAIEEFVQSFFDGTLKQHLLSEDLPADWAAKPVKVLVAANFD 417
+KY S+ SPN+IEEF GT+ ++ SE +P + A V V V FD
Sbjct: 377 SKYLLESDP-SPNSIEEFCSGLAHGTVSRYYRSEPVPDNENASIVTV-VGKTFD 428
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 32.7 bits (71), Expect = 0.24
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVPIYDNSASTLR 527
++V FYAPWC C L P ++ +A ++
Sbjct: 161 LVVNFYAPWCYWCNLLKPSWEKAAKQIK 188
>At4g37200.1 68417.m05266 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; identical to cDNA
thioredoxin-like protein (hcf164 gene) GI;12049652
Length = 261
Score = 31.9 bits (69), Expect = 0.43
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVP 497
K +VEFYA WC C++L P
Sbjct: 139 KPTVVEFYADWCEVCRELAP 158
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 551 KIDATANELEHTKITSFPTIKLYSKDNQVHDYNGERTLA-GLTKFVE 688
KI +ELE TK + +KLY K V DYN ++ ++ G K+VE
Sbjct: 538 KIGFLTDELEKTKADN---VKLYGKIRYVQDYNHDKVVSRGSKKYVE 581
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 31.9 bits (69), Expect = 0.43
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 435 TKKVLVEFYAPWCGHCKQLVPIYDNSAS 518
++ +++ F A WCG C+ + P+Y N A+
Sbjct: 292 SRLLILYFTATWCGPCRYMSPLYSNLAT 319
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 435 TKKVLVEFYAPWCGHCKQLVPIYDNSAS 518
T V+V F A WCG C+ ++PI + S
Sbjct: 227 TPHVMVMFTARWCGPCRDMIPILNKMDS 254
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 31.9 bits (69), Expect = 0.43
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +3
Query: 429 DTTKKVLVEFYAPWCGHCKQLVPIYDNSA 515
++ K ++++F A WC C+ + PI+++ A
Sbjct: 26 ESNKLIVIDFTASWCPPCRMIAPIFNDLA 54
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 31.1 bits (67), Expect = 0.74
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVP 497
V+V+FY WCG C+ + P
Sbjct: 116 VIVDFYGTWCGSCRAMFP 133
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 30.7 bits (66), Expect = 0.98
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVP 497
V+VEFY WC C+ L P
Sbjct: 126 VIVEFYGTWCASCRALFP 143
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 30.7 bits (66), Expect = 0.98
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVP 497
V+VEFY WC C+ L P
Sbjct: 126 VIVEFYGTWCASCRALFP 143
>At4g21120.1 68417.m03054 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 594
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 95 YLEDLKPVAKTYRDRIMTVAIDADEDEHQRILEFFGMKK 211
YL+ LK + DRIMT ++D+DE + MKK
Sbjct: 34 YLKALKETPSRFMDRIMTRSLDSDEINEMKARSGHEMKK 72
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVPIYDNSASTL 524
V+V+F A WCG C+ + P + + A L
Sbjct: 31 VVVDFTASWCGPCRFIAPFFADLAKKL 57
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 30.7 bits (66), Expect = 0.98
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVPIY 503
K V+++ Y WCG CK + P Y
Sbjct: 88 KLVVLDMYTQWCGPCKVIAPKY 109
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVPIY 503
K V+++ Y WCG CK + P Y
Sbjct: 98 KIVVLDMYTQWCGPCKVIAPKY 119
>At5g55920.1 68418.m06975 nucleolar protein, putative similar to
SP|P46087 Proliferating-cell nucleolar antigen p120
(Proliferation-associated nucleolar protein p120) {Homo
sapiens}, SP|P40991 Nucleolar protein NOP2
{Saccharomyces cerevisiae}; contains Pfam profile
PF01189: NOL1/NOP2/sun family
Length = 682
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 524 ENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDYNGE 655
++DDD I+AK DA +L K + ++ + K + VHD E
Sbjct: 146 DSDDDDIVAKSDAIDRDLAMQKKDAAAELEDFIKQDDVHDEEPE 189
>At3g42410.1 68416.m04385 replication protein-related weak
similarity to Replication Protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein) (DMRPA1)
(GI:2498844)(SP:Q24492) [Drosophila melanogaster]
Length = 474
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 467 LVRPLQTAGPYLRQLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDY 646
L+ PL +G + DD+V+ KID T +++ K F +KL N +Y
Sbjct: 235 LIDPLFPDYDLQTYIGWNAYGDDEVVDGKIDYTFSDVHPRKTRWFVFVKLLRLWNWPPNY 294
Query: 647 NGE 655
+GE
Sbjct: 295 DGE 297
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVPIYDNSAST 521
K ++V F A WC K ++PIY AST
Sbjct: 63 KILVVNFKASWCLPSKTILPIYQELAST 90
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 29.5 bits (63), Expect = 2.3
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 429 DTTKKVLVEFYAPWCGHCKQLVP 497
++ K ++V+F A WCG C+ + P
Sbjct: 45 ESNKLLVVDFSASWCGPCRMIEP 67
>At5g05840.1 68418.m00642 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620);
expression supported by MPSS
Length = 439
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +2
Query: 431 HN*EGPRRILRSLVR---PLQTAGPYLRQ--LGEHFENDDDVIIAKIDATANELE 580
H GP R LR ++ P TA + R +GE ND+D I K+DA + L+
Sbjct: 215 HASRGPPRPLRRFLQGLDPKSTANLFARSVCMGEKKINDEDCFILKLDAEPSALK 269
>At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / PAPS
reductase homolog (PRH19) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738756; identical to cDNA PAPS reductase homolog
(PRH19) GI:1710111
Length = 465
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 447 LVEFYAPWCGHCKQLVPIYDNSASTL 524
+V YAPWC C+ + YD A L
Sbjct: 377 IVVLYAPWCPFCQAMEASYDELADKL 402
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVPIYDNSA 515
K +VEF+A WC C+ P Y+ A
Sbjct: 55 KYAVVEFFAHWCPACRNYKPHYEKVA 80
>At1g79420.1 68414.m09255 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 417
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +2
Query: 431 HN*EGPRRILRSLVR---PLQTAGPYLRQ--LGEHFENDDDVIIAKIDATANEL 577
H +GP+R LR L++ P TA + + LGE DDD + K+ A + L
Sbjct: 224 HAAKGPQRPLRRLIQGLDPKTTASLFAKAQCLGERRIGDDDCFVLKVSADRDSL 277
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVP 497
K V+V+F++P CG CK L P
Sbjct: 118 KLVVVDFFSPGCGGCKALHP 137
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 444 VLVEFYAPWCGHCKQLVP 497
V+++FY+P CG CK L P
Sbjct: 108 VVLDFYSPGCGGCKSLHP 125
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVP 497
K V+V+F++P CG CK L P
Sbjct: 114 KLVVVDFFSPSCGGCKALHP 133
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 119 AKTYRDRIMTVAIDADEDEHQRILEFFGMKKDEVPSARLIALEQDRPNT 265
+K++R R+ T I + +L F G+K+ E +A LI+++ D P T
Sbjct: 1730 SKSHR-RVPTNFIQVIDQLIDIVLSFPGLKRQEGEAANLISMDVDEPTT 1777
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 420 SVFDTTKKVLVEFYAPWCGHCKQLVP 497
S+ + K ++++F A WCG CK + P
Sbjct: 38 SMKGSNKLLVIDFTAVWCGPCKAMEP 63
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 28.7 bits (61), Expect = 4.0
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +3
Query: 429 DTTKKVLVEFYAPWCGHCKQLVPIYDNSA 515
++ K ++++F A WC C+ + P++ + A
Sbjct: 25 ESKKLIVIDFTATWCPPCRFIAPVFADLA 53
>At3g14960.1 68416.m01892 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 343
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 442 FLVVSKTLRQSWRRRAL*RVWRPSPRAGPRSADAASGCRRRTI 314
F+ + R + RRRAL W PS G R + ++G R I
Sbjct: 87 FVGIQTGFRSAGRRRALRNTWMPSDPEGLRRLEESTGLAIRFI 129
>At3g10845.1 68416.m01306 RNA recognition motif (RRM)-containing
protein similar to SP|P42731 Polyadenylate-binding
protein 2 (Poly(A) binding protein 2) (PABP 2)
{Arabidopsis thaliana}; contains INTERPRO:IPR000504
RNA-binding region RNP-1 (RNA recognition motif) domain
Length = 423
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 83 DFEKYLEDLKPVAKTYRDRIMTVAIDADEDEHQRILEFFGMKKD--EVPSARLIALEQDR 256
DF ED P A + + ++ VA + +IL+ FG +D EV S RLIA +D+
Sbjct: 110 DFLPRQEDETPPAD-FAEEVLFVA---NLSPQTKILDIFGFCQDVGEVVSVRLIANHEDK 165
Query: 257 P 259
P
Sbjct: 166 P 166
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 28.7 bits (61), Expect = 4.0
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +3
Query: 429 DTTKKVLVEFYAPWCGHCKQLVPIYDNSA 515
++ K ++++F A WC C+ + P++ A
Sbjct: 25 ESKKLIVIDFTASWCPPCRFIAPVFAEMA 53
>At1g15020.2 68414.m01795 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 528
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 420 SVFDTT--KKVLVEFYAPWCGHCKQLVPIYDNSA 515
SVF + K ++EF+A WC C+ P Y+ A
Sbjct: 53 SVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVA 86
>At1g15020.1 68414.m01794 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 502
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 420 SVFDTT--KKVLVEFYAPWCGHCKQLVPIYDNSA 515
SVF + K ++EF+A WC C+ P Y+ A
Sbjct: 53 SVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVA 86
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCKQLVPIY 503
K V+ F A WCG CK + P +
Sbjct: 46 KIVVANFSATWCGPCKIVAPFF 67
>At2g41720.1 68415.m05157 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 822
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 146 TVAIDADEDEHQRILEFFGMKKDEVPSARLIALEQDR 256
+V+++ D EH+ + G++K ++P I +E DR
Sbjct: 35 SVSVNYDRGEHEVSVNIGGLRKADIPRRYRIRVENDR 71
>At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / PAPS
reductase homolog (PRH26) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738760; identical to cDNA PAPS reductase homolog
(PRH26) GI:1710113
Length = 458
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 447 LVEFYAPWCGHCKQLVPIYDNSASTL 524
+V YAPWC C+ + +D A L
Sbjct: 370 IVVLYAPWCPFCQAMEASFDELADKL 395
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 462 APWCGHCKQLVPIYDNSAS 518
APWC CK++ P++ + AS
Sbjct: 17 APWCVPCKKIEPVFRDLAS 35
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 429 DTTKKVLVEFYAPWCGHC 482
D ++V+FYA WCG C
Sbjct: 92 DRKVPLIVDFYATWCGPC 109
>At1g15310.1 68414.m01832 signal recognition particle 54 kDa protein
1 / SRP54 (SRP-54) (SRP-54A) identical to
Swiss-Prot:P37106 signal recognition particle 54 kDa
protein 1 (SRP54) [Arabidopsis thaliana]
Length = 479
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 351 QQMLLQGAVEER-LNEFLNSVRRQLITAGLVFGL 253
QQM ++E+ LN+FLN + R L+ + + FGL
Sbjct: 15 QQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGL 48
>At1g11040.1 68414.m01265 DNAJ chaperone C-terminal
domain-containing protein contains Pfam profile PF01556:
DnaJ C terminal region
Length = 438
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 158 DADEDEHQRILEFFGMKKDEVPSARLIALEQDRPNTSPAVMSCRLTLLRNSFNRSSTAP 334
DAD H+R LE ++D++ +AR Q ++S V R +LL NS +R S P
Sbjct: 43 DADSAIHRRYLEEKFAEEDDLIAARRGLRLQSMDDSS--VFKRRSSLLSNSSSRRSHTP 99
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +3
Query: 447 LVEFYAPWCGHCKQLVPIY---DNSASTLR 527
++ + A WCG C Q++P + NS S L+
Sbjct: 47 VINYGASWCGVCSQILPAFRKLSNSFSKLK 76
>At3g24495.1 68416.m03072 DNA mismatch repair protein MSH6-2 (MSH7)
identical to SP|Q9SMV7 DNA mismatch repair protein
MSH6-2 (AtMsh6-2) (MutS homolog 7) {Arabidopsis
thaliana}; GC donor splice site at exon 11
Length = 1109
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -3
Query: 166 VGIDGDGHDPVAVGLRDRLQILKVFLEVAIFLG*EDKKVVFD 41
+G+DGD P G+R R LK LE + EDK V D
Sbjct: 166 IGVDGDVPGPETPGMRPRASRLKRVLEDEMTFK-EDKVPVLD 206
>At2g45900.1 68415.m05708 expressed protein
Length = 720
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +2
Query: 164 DEDEHQRILEFFGMKKDEVPSA---RLIALEQDRPNTSPAV-MSCRLTLLRNSFNRSSTA 331
DEDEH+++LE +K+ + P + + + + + NT+ + S +++L F T+
Sbjct: 453 DEDEHKQLLEKEVLKEGQSPCSPPNSSVRMSECQENTTDVLGKSSPVSVLEPFFTDDDTS 512
Query: 332 P*SS 343
P SS
Sbjct: 513 PNSS 516
>At2g05290.1 68415.m00557 expressed protein similar to zinc finger
protein [Arabidopsis thaliana] GI:976277
Length = 383
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +1
Query: 34 WKDQIPPSYLLIQEKW-RLREIP 99
W + +PP+YL+ W RLR IP
Sbjct: 110 WVEDLPPNYLMFLLIWLRLRNIP 132
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Frame = +3
Query: 438 KKVLVEFYAPWCGHCK----QLVPIYDNSAS 518
KK+ + F A WCG C+ QLV +Y+ +S
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNELSS 74
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,400,077
Number of Sequences: 28952
Number of extensions: 291815
Number of successful extensions: 1091
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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