Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00164
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   1.6  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   2.7  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   4.8  
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    23   6.3  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.3  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   6.3  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 372 YGPIPLQKPNCLIPSYQR 319
           +GP  L  PNC++PS  R
Sbjct: 679 WGPYKLSVPNCVVPSSWR 696


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = +1

Query: 169 RFRRQTPVKTYTTSRQE---EPDYSIQETPQS 255
           RF + TP+ T TTS +E   EP+  +   P+S
Sbjct: 500 RFAKTTPLTTTTTSTEEPALEPETIMAVEPES 531


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 85  LLNLPASLYSRLFYSRIKRV 26
           LLN P  +Y RL  SRI  V
Sbjct: 501 LLNNPGKVYERLLLSRINDV 520


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 491 YSLYDVAKEARNELLKKHPDMDFSAISKRLGEMWSN 598
           Y    V+ +   ++  +HPD  F A ++RL   W +
Sbjct: 157 YQCAVVSNDRFRDVASEHPDWAFVAANRRLPFDWDS 192


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 372 YGPIPLQKPNCLIPSYQRFQHYSHNN 295
           YG I L   NCL+P  +  Q  S N+
Sbjct: 42  YGKIVLTLENCLLPEVKLDQTPSQND 67


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 372 YGPIPLQKPNCLIPSYQRFQHYSHNN 295
           YG I L   NCL+P  +  Q  S N+
Sbjct: 42  YGKIVLTLENCLLPEVKLDQTPSQND 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,404
Number of Sequences: 2352
Number of extensions: 10858
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)