Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00163
         (541 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55C50 Cluster: PREDICTED: similar to CG2848-PA;...    36   0.79 
UniRef50_Q7RRD0 Cluster: Putative uncharacterized protein PY0080...    34   1.8  
UniRef50_UPI0000DB71E2 Cluster: PREDICTED: similar to Sperm flag...    32   9.7  
UniRef50_UPI00004986F1 Cluster: BspA-like leucine rich repeat pr...    32   9.7  

>UniRef50_UPI0000D55C50 Cluster: PREDICTED: similar to CG2848-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG2848-PA - Tribolium castaneum
          Length = 936

 Score = 35.5 bits (78), Expect = 0.79
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 314 LQHGESQTS-FRIFRSFVTNEKCIKTQLLIENNSLISTSHLEVYGKIITNNKCYILCIMY 490
           L H E+ TS  + F   +   KC K Q+  E   ++ TS L  YG+ +  N  +  C+ Y
Sbjct: 799 LDHKEANTSVMKFFYDLINTGKCGKNQIDFEQRKVLVTSILNEYGQQLVTNLLH-ACVFY 857


>UniRef50_Q7RRD0 Cluster: Putative uncharacterized protein PY00801;
            n=8; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY00801 - Plasmodium yoelii yoelii
          Length = 2340

 Score = 34.3 bits (75), Expect = 1.8
 Identities = 13/53 (24%), Positives = 29/53 (54%)
 Frame = +2

Query: 257  FRLSLRVARNYGFNFFLFCLQHGESQTSFRIFRSFVTNEKCIKTQLLIENNSL 415
            F L++++  +Y + +FL+ +     +  ++   SF+TN KC     + +N+ L
Sbjct: 1958 FLLNIQIDMHYSYCYFLYFINQMVGKNIYKYLESFITNYKCFFIMYVTKNDLL 2010


>UniRef50_UPI0000DB71E2 Cluster: PREDICTED: similar to Sperm
           flagellar protein 1; n=1; Apis mellifera|Rep: PREDICTED:
           similar to Sperm flagellar protein 1 - Apis mellifera
          Length = 264

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +3

Query: 9   RESNYKIIYMKIVVKVHLSLNRYVINITVN 98
           ++ N+KI+  K++ K+H+ LN+ +IN   N
Sbjct: 69  KKENWKILNRKVLSKIHMKLNKNIINQLAN 98


>UniRef50_UPI00004986F1 Cluster: BspA-like leucine rich repeat
           protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
           BspA-like leucine rich repeat protein - Entamoeba
           histolytica HM-1:IMSS
          Length = 844

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 106 NFIISKFGPCNLSL*LNFNNHCL*AFACSQSICKSLFVWT 225
           N  IS F P N  + + + N C+  F C++ I K+ F++T
Sbjct: 456 NSNISTFTPSNSLVQIAYGNECISQFNCTKDITKNQFIFT 495


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,980,891
Number of Sequences: 1657284
Number of extensions: 6485699
Number of successful extensions: 11021
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11019
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)