Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00162
         (609 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p pro...   138   5e-33
AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p pro...   138   5e-33
AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC...   138   5e-33
AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB...   138   5e-33
AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA...   138   5e-33
AE013599-764|AAF59005.1|  389|Drosophila melanogaster CG13744-PA...    29   5.0  
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    29   6.6  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    29   6.6  

>BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p
           protein.
          Length = 307

 Score =  138 bits (334), Expect = 5e-33
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = +1

Query: 238 EGSQDHVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIA 417
           +G +  V LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI  ED++ IA
Sbjct: 196 KGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIA 255

Query: 418 KIMRNRSMARYLSGSVKEILGTAQSVGCTVGAGRH 522
           ++MR RSMAR L G+ KE+LGTAQSVGCTV  G+H
Sbjct: 256 RVMRPRSMARELKGTCKEVLGTAQSVGCTVD-GKH 289



 Score =  119 bits (286), Expect = 4e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +2

Query: 80  MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 253
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKI
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKI 200


>AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p
           protein.
          Length = 165

 Score =  138 bits (334), Expect = 5e-33
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = +1

Query: 238 EGSQDHVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIA 417
           +G +  V LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI  ED++ IA
Sbjct: 54  KGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIA 113

Query: 418 KIMRNRSMARYLSGSVKEILGTAQSVGCTVGAGRH 522
           ++MR RSMAR L G+ KE+LGTAQSVGCTV  G+H
Sbjct: 114 RVMRPRSMARELKGTCKEVLGTAQSVGCTVD-GKH 147



 Score =  119 bits (286), Expect = 4e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +2

Query: 80  MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 253
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKI
Sbjct: 1   MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKI 58


>AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC,
           isoform C protein.
          Length = 165

 Score =  138 bits (334), Expect = 5e-33
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = +1

Query: 238 EGSQDHVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIA 417
           +G +  V LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI  ED++ IA
Sbjct: 54  KGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIA 113

Query: 418 KIMRNRSMARYLSGSVKEILGTAQSVGCTVGAGRH 522
           ++MR RSMAR L G+ KE+LGTAQSVGCTV  G+H
Sbjct: 114 RVMRPRSMARELKGTCKEVLGTAQSVGCTVD-GKH 147



 Score =  119 bits (286), Expect = 4e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +2

Query: 80  MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 253
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKI
Sbjct: 1   MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKI 58


>AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB,
           isoform B protein.
          Length = 165

 Score =  138 bits (334), Expect = 5e-33
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = +1

Query: 238 EGSQDHVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIA 417
           +G +  V LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI  ED++ IA
Sbjct: 54  KGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIA 113

Query: 418 KIMRNRSMARYLSGSVKEILGTAQSVGCTVGAGRH 522
           ++MR RSMAR L G+ KE+LGTAQSVGCTV  G+H
Sbjct: 114 RVMRPRSMARELKGTCKEVLGTAQSVGCTVD-GKH 147



 Score =  119 bits (286), Expect = 4e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +2

Query: 80  MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 253
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKI
Sbjct: 1   MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKI 58


>AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA,
           isoform A protein.
          Length = 165

 Score =  138 bits (334), Expect = 5e-33
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = +1

Query: 238 EGSQDHVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIA 417
           +G +  V LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI  ED++ IA
Sbjct: 54  KGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIA 113

Query: 418 KIMRNRSMARYLSGSVKEILGTAQSVGCTVGAGRH 522
           ++MR RSMAR L G+ KE+LGTAQSVGCTV  G+H
Sbjct: 114 RVMRPRSMARELKGTCKEVLGTAQSVGCTVD-GKH 147



 Score =  119 bits (286), Expect = 4e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +2

Query: 80  MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 253
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKI
Sbjct: 1   MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKI 58


>AE013599-764|AAF59005.1|  389|Drosophila melanogaster CG13744-PA
           protein.
          Length = 389

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = -2

Query: 479 PRISF--TEPERYRAIDLFLMIFAIPITSSREMLPLCL 372
           PR +F  T+P+RY   D+ L+  A P + +  +LP+CL
Sbjct: 224 PRFNFRMTQPDRY---DIALLKLAQPTSFTEHILPICL 258


>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
            ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 141  KSVPH-HLWPLKSVLLVCLLKRWVMTLPRPQVTGRVSRSCAADS 269
            K V H H W LK   +   ++ W+  L +PQ T R SR+ + +S
Sbjct: 4711 KDVIHKHFW-LKREEICAQIEGWIEELGKPQYTERASRTISFNS 4753


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
            protein.
          Length = 4876

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 141  KSVPH-HLWPLKSVLLVCLLKRWVMTLPRPQVTGRVSRSCAADS 269
            K V H H W LK   +   ++ W+  L +PQ T R SR+ + +S
Sbjct: 4711 KDVIHKHFW-LKREEICAQIEGWIEELGKPQYTERASRTISFNS 4753


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,066,466
Number of Sequences: 53049
Number of extensions: 645554
Number of successful extensions: 1443
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1443
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)