Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00160X
         (577 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DDL9 Cluster: Chromosome undetermined scaffold_468, w...    34   2.1  
UniRef50_Q23MA1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_A2F0A3 Cluster: Putative uncharacterized protein; n=3; ...    33   6.4  

>UniRef50_A0DDL9 Cluster: Chromosome undetermined scaffold_468,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_468,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 169

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = -3

Query: 332 TYIF*IFLTLNDSPAKLQSCLSQITCDN----IFYLYNAVFSNCNTIISCYICFLVIL 171
           T+ F +FL+   S    Q+C+ +ITC N    +  L    F  C  +  CY C ++ +
Sbjct: 38  TFFF-LFLSYQSSALCTQTCIDRITCYNVASHVLCLQYVSFMGCQPLYCCYSCAVIFI 94


>UniRef50_Q23MA1 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1484

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = -2

Query: 351 KFSGHQYVYFLDIFNIK*FSCKVTKLLKPNNL**YILFV 235
           KF   Q+  F+ IF  + FSC V+K LKP +L  Y+L++
Sbjct: 109 KFLEGQFRSFILIFKQQFFSCTVSKFLKPYHLFIYLLYL 147


>UniRef50_A2F0A3 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 933

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = -3

Query: 287 KLQSCLSQITCDNIFYLYNAVFSNCNTIISCYICFLVILNEMCRNKHYIYIYIS 126
           +LQS L+   C N+  +    +S+ N +IS    F +I ++   NK Y +IY S
Sbjct: 87  ELQSQLTAYDCINLLSMIQPKYSDINPLISLLKKFKLIDDQFSMNKIYYHIYQS 140


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 426,588,007
Number of Sequences: 1657284
Number of extensions: 7617710
Number of successful extensions: 15623
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15613
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)