Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00160X
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    27   0.11 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    27   0.11 
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   1.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   1.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.9  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   7.5  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -3

Query: 215 CNTIISCYICFLVILN-EMCRNKHYIYIYISVAV 117
           CNT+IS  +CF+++L  E+ R    +  Y+++ +
Sbjct: 161 CNTVISATVCFMMLLMLEIWRRFTILNNYLTIVL 194


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -3

Query: 215 CNTIISCYICFLVILN-EMCRNKHYIYIYISVAV 117
           CNT+IS  +CF+++L  E+ R    +  Y+++ +
Sbjct: 157 CNTVISATVCFMMLLMLEIWRRFTILNNYLTIVL 190


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 366 FKYLKKFSGHQYVYFLDIFNIK*F 295
           ++YL+     +Y  F+D+FN+  F
Sbjct: 170 YQYLRSTLSDRYKVFVDLFNLSTF 193


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 366 FKYLKKFSGHQYVYFLDIFNIK*F 295
           ++YL+     +Y  F+D+FN+  F
Sbjct: 330 YQYLRSTLSDRYKVFVDLFNLSTF 353


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 366 FKYLKKFSGHQYVYFLDIFNIK*F 295
           ++YL+     +Y  F+D+FN+  F
Sbjct: 330 YQYLRSTLSDRYKVFVDLFNLSTF 353


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -3

Query: 209 TIISCYICFLVILNEMCRNKHY 144
           TI++ + C+ V+   +C+ + Y
Sbjct: 71  TIVNAFSCYTVLAPVLCKRQQY 92


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = -3

Query: 242 YLYNAVFSNCNTIISCYICFLVILN--EMCRNKHYI 141
           Y    VFS   T  S +IC LV  N  E+  N +Y+
Sbjct: 33  YKIFVVFSFAVTFFSAWICALVNYNVSEISENFYYL 68


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +2

Query: 128 RYIYIYSVCFDTSHLKLPGNKYSXXXXXXXXKTQHYTN 241
           R++  +++CFD   L    + Y         +T  YT+
Sbjct: 95  RFVRQFTICFDDVDLNSLYSSYEITRFIRSRETDVYTH 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,682
Number of Sequences: 336
Number of extensions: 2378
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)