Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00160X
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73898-3|CAC42390.2|  606|Caenorhabditis elegans Hypothetical pr...    31   0.59 
Z73898-2|CAC42388.1|  667|Caenorhabditis elegans Hypothetical pr...    31   0.59 
Z73898-1|CAC42389.1|  647|Caenorhabditis elegans Hypothetical pr...    31   0.59 
M23064-1|AAA27892.1|  609|Caenorhabditis elegans Na+/H+ antiport...    31   0.59 
AF497835-1|AAM18113.1|  647|Caenorhabditis elegans putative Na-H...    31   0.59 
AF497834-1|AAM18112.1|  667|Caenorhabditis elegans putative Na-H...    31   0.59 
Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z77661-5|CAB01182.1|  343|Caenorhabditis elegans Hypothetical pr...    27   7.2  
U61956-5|AAB03178.2|  286|Caenorhabditis elegans Serpentine rece...    27   9.5  

>Z73898-3|CAC42390.2|  606|Caenorhabditis elegans Hypothetical
           protein ZK822.3c protein.
          Length = 606

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 159 SKQTLYIYIYLSSGASDSKHKFNLYVILNCMFVCLYY 49
           S +T+ I+++L      S+H F+LY I   +F CL Y
Sbjct: 269 SSETV-IFMFLGLSTISSQHHFDLYFICATLFFCLIY 304


>Z73898-2|CAC42388.1|  667|Caenorhabditis elegans Hypothetical
           protein ZK822.3b protein.
          Length = 667

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 159 SKQTLYIYIYLSSGASDSKHKFNLYVILNCMFVCLYY 49
           S +T+ I+++L      S+H F+LY I   +F CL Y
Sbjct: 329 SSETV-IFMFLGLSTISSQHHFDLYFICATLFFCLIY 364


>Z73898-1|CAC42389.1|  647|Caenorhabditis elegans Hypothetical
           protein ZK822.3a protein.
          Length = 647

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 159 SKQTLYIYIYLSSGASDSKHKFNLYVILNCMFVCLYY 49
           S +T+ I+++L      S+H F+LY I   +F CL Y
Sbjct: 309 SSETV-IFMFLGLSTISSQHHFDLYFICATLFFCLIY 344


>M23064-1|AAA27892.1|  609|Caenorhabditis elegans Na+/H+ antiporter
           protein.
          Length = 609

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 159 SKQTLYIYIYLSSGASDSKHKFNLYVILNCMFVCLYY 49
           S +T+ I+++L      S+H F+LY I   +F CL Y
Sbjct: 272 SSETV-IFMFLGLSTISSQHHFDLYFICATLFFCLIY 307


>AF497835-1|AAM18113.1|  647|Caenorhabditis elegans putative Na-H
           exchanger isoform 9b protein.
          Length = 647

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 159 SKQTLYIYIYLSSGASDSKHKFNLYVILNCMFVCLYY 49
           S +T+ I+++L      S+H F+LY I   +F CL Y
Sbjct: 309 SSETV-IFMFLGLSTISSQHHFDLYFICATLFFCLIY 344


>AF497834-1|AAM18112.1|  667|Caenorhabditis elegans putative Na-H
           exchanger isoform 9a protein.
          Length = 667

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 159 SKQTLYIYIYLSSGASDSKHKFNLYVILNCMFVCLYY 49
           S +T+ I+++L      S+H F+LY I   +F CL Y
Sbjct: 329 SSETV-IFMFLGLSTISSQHHFDLYFICATLFFCLIY 364


>Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical
           protein K05D4.3 protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 275 CLSQITCDNIFYLYNAVFSNCNTIISCYICFLVILNEMCRNKH 147
           CL       +FY+++ +  +   +IS     L+ILN   ++KH
Sbjct: 172 CLRDFEAAKVFYMFSYISMHLFLLISALTYILLILNIWKKSKH 214


>Z77661-5|CAB01182.1|  343|Caenorhabditis elegans Hypothetical
           protein F40G12.6 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 209 TIISCYICFLVILNEMCRNKHYIYIYI 129
           T++S  +C L I  EMC +  Y Y+ I
Sbjct: 133 TLVSGKLCILSIAKEMCHSAAYSYLKI 159


>U61956-5|AAB03178.2|  286|Caenorhabditis elegans Serpentine
           receptor, class x protein20 protein.
          Length = 286

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = -3

Query: 248 IFYLYNAVFSNCNTIISCYICFLVILNEMCRNKH-----YIYIYISVAVPAIPNT 99
           + +LY  VFSN NT I   + + + +  MC   +     Y+Y +  + + + P T
Sbjct: 107 VIFLYEKVFSNFNTYIMICMAYAIAI-VMCTTFYELLECYLYFHADLWIFSYPET 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,277,676
Number of Sequences: 27780
Number of extensions: 197787
Number of successful extensions: 456
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)