Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00158
(761 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 141 1e-32
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 132 9e-30
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 115 1e-24
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 115 1e-24
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 115 1e-24
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 111 2e-23
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 107 2e-22
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 105 2e-21
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 104 2e-21
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 101 1e-20
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 89 1e-16
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 87 4e-16
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 87 6e-16
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 86 1e-15
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 85 2e-15
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 85 2e-15
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 84 4e-15
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 84 4e-15
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 84 4e-15
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 83 6e-15
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 83 6e-15
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 83 1e-14
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 82 1e-14
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 82 1e-14
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 82 2e-14
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 81 2e-14
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 81 3e-14
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 81 4e-14
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 80 5e-14
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 80 5e-14
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 80 5e-14
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 80 7e-14
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 79 9e-14
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 79 9e-14
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 79 1e-13
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 79 1e-13
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 79 1e-13
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 79 2e-13
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 2e-13
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 78 2e-13
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 78 2e-13
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 78 2e-13
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 78 3e-13
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 78 3e-13
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 78 3e-13
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 78 3e-13
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 77 4e-13
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 77 4e-13
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 77 6e-13
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 77 6e-13
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 77 6e-13
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 77 6e-13
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 77 6e-13
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 76 8e-13
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 76 8e-13
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 76 8e-13
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 76 8e-13
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 76 8e-13
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 76 1e-12
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 76 1e-12
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 76 1e-12
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 75 1e-12
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 1e-12
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 75 1e-12
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 75 1e-12
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 75 2e-12
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 75 2e-12
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 2e-12
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 75 2e-12
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 75 2e-12
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 75 2e-12
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 75 2e-12
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 75 3e-12
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 75 3e-12
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 75 3e-12
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 75 3e-12
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 75 3e-12
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 74 3e-12
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 74 3e-12
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 74 3e-12
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 74 3e-12
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 74 3e-12
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 74 3e-12
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 74 4e-12
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 74 4e-12
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 74 4e-12
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 74 4e-12
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 74 4e-12
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 74 4e-12
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 73 6e-12
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 73 6e-12
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 73 6e-12
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 73 6e-12
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 73 6e-12
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 73 8e-12
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 73 8e-12
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 73 8e-12
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 73 8e-12
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 73 8e-12
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 73 1e-11
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 73 1e-11
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 73 1e-11
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 73 1e-11
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 73 1e-11
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 73 1e-11
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 72 1e-11
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 72 1e-11
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 72 1e-11
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 72 1e-11
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 72 1e-11
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 72 1e-11
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 72 1e-11
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 72 2e-11
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 2e-11
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 72 2e-11
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 72 2e-11
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 71 2e-11
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 2e-11
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 71 2e-11
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 71 2e-11
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 71 2e-11
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 71 2e-11
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 71 2e-11
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 71 2e-11
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 71 2e-11
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 71 2e-11
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 71 2e-11
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 71 3e-11
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 71 3e-11
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 71 3e-11
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 71 3e-11
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 71 3e-11
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 71 3e-11
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 71 3e-11
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 71 3e-11
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 71 4e-11
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 71 4e-11
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 71 4e-11
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 71 4e-11
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 71 4e-11
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 71 4e-11
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 70 5e-11
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 70 5e-11
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 70 5e-11
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 70 5e-11
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 70 5e-11
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 70 5e-11
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 70 5e-11
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 70 5e-11
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 70 5e-11
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 70 5e-11
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 70 5e-11
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 70 5e-11
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 70 7e-11
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 70 7e-11
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 70 7e-11
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 70 7e-11
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 70 7e-11
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 70 7e-11
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 70 7e-11
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 70 7e-11
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 69 1e-10
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 69 1e-10
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 69 1e-10
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 69 1e-10
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 69 1e-10
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 69 1e-10
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 69 1e-10
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 69 1e-10
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 69 1e-10
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 1e-10
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 69 1e-10
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 69 1e-10
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 69 1e-10
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 69 1e-10
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 69 1e-10
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 69 1e-10
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 69 1e-10
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 69 2e-10
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 2e-10
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 2e-10
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 69 2e-10
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 69 2e-10
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 69 2e-10
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 69 2e-10
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 69 2e-10
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 69 2e-10
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 69 2e-10
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 69 2e-10
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 68 2e-10
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 68 2e-10
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 68 2e-10
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 68 2e-10
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 68 2e-10
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 68 2e-10
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 68 2e-10
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 68 3e-10
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 68 3e-10
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 68 3e-10
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 68 3e-10
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 68 3e-10
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 68 3e-10
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 68 3e-10
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 68 3e-10
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 67 4e-10
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 67 4e-10
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 67 4e-10
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 67 4e-10
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 67 4e-10
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 67 4e-10
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_Q54CH6 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 67 4e-10
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 67 4e-10
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 67 4e-10
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 67 4e-10
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 67 4e-10
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 67 4e-10
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 67 4e-10
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 67 5e-10
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 67 5e-10
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 67 5e-10
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 67 5e-10
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 67 5e-10
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 67 5e-10
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 67 5e-10
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 67 5e-10
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 67 5e-10
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 67 5e-10
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 67 5e-10
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 67 5e-10
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 67 5e-10
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 67 5e-10
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 66 7e-10
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 66 7e-10
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 66 7e-10
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 66 7e-10
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 66 7e-10
UniRef50_A7RMK9 Cluster: Predicted protein; n=1; Nematostella ve... 66 7e-10
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 66 7e-10
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 66 7e-10
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 66 7e-10
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 66 7e-10
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 66 7e-10
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 66 9e-10
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 66 9e-10
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 9e-10
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 66 9e-10
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 66 9e-10
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 66 9e-10
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 66 9e-10
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 66 9e-10
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 66 9e-10
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 66 9e-10
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 66 9e-10
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 66 1e-09
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 66 1e-09
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 66 1e-09
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 66 1e-09
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 66 1e-09
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 66 1e-09
UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n... 66 1e-09
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 66 1e-09
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 66 1e-09
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 66 1e-09
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 66 1e-09
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 66 1e-09
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 66 1e-09
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 65 2e-09
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 65 2e-09
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 65 2e-09
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 65 2e-09
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 65 2e-09
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 65 2e-09
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 65 2e-09
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 65 2e-09
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 65 2e-09
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 65 2e-09
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 65 2e-09
UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD (Asp-... 65 2e-09
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 65 2e-09
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 65 2e-09
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 2e-09
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 65 2e-09
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 65 2e-09
UniRef50_Q54DN9 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_Q4Q552 Cluster: ATP-dependent RNA helicase, putative; n... 65 2e-09
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 65 2e-09
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 64 3e-09
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 3e-09
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 3e-09
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 64 3e-09
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 3e-09
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 64 3e-09
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 64 3e-09
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 64 3e-09
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 64 3e-09
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 64 3e-09
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 4e-09
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 64 4e-09
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 64 4e-09
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 64 4e-09
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 64 4e-09
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 4e-09
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 64 4e-09
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 64 4e-09
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 64 4e-09
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 64 4e-09
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 64 5e-09
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 64 5e-09
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 64 5e-09
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 64 5e-09
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 64 5e-09
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 64 5e-09
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 5e-09
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 64 5e-09
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 64 5e-09
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 64 5e-09
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 64 5e-09
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 64 5e-09
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 63 6e-09
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 63 6e-09
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 63 6e-09
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 63 6e-09
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 63 6e-09
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 63 6e-09
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 63 6e-09
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 63 6e-09
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 63 6e-09
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 63 6e-09
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 63 6e-09
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 63 6e-09
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 63 6e-09
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 63 6e-09
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 63 6e-09
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 63 8e-09
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 63 8e-09
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 63 8e-09
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 63 8e-09
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 63 8e-09
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 63 8e-09
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 63 8e-09
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 63 8e-09
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 63 8e-09
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 62 1e-08
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 62 1e-08
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 62 1e-08
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 62 1e-08
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 62 1e-08
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 62 1e-08
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 62 1e-08
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 62 1e-08
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 62 1e-08
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 1e-08
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 62 1e-08
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 62 1e-08
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 62 1e-08
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 62 1e-08
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 62 1e-08
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 62 1e-08
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 62 1e-08
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 62 1e-08
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 62 1e-08
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 62 1e-08
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 62 2e-08
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 62 2e-08
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 62 2e-08
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 62 2e-08
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 62 2e-08
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 62 2e-08
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 62 2e-08
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 62 2e-08
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 62 2e-08
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 2e-08
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 62 2e-08
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 62 2e-08
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 62 2e-08
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 61 3e-08
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 3e-08
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 61 3e-08
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 61 3e-08
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 61 3e-08
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 61 3e-08
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 61 3e-08
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 61 3e-08
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 61 3e-08
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 61 3e-08
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 61 3e-08
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 61 3e-08
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 61 3e-08
UniRef50_Q7RZH4 Cluster: ATP-dependent RNA helicase mak-5; n=1; ... 61 3e-08
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 61 3e-08
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 61 3e-08
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 61 3e-08
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 61 3e-08
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 61 3e-08
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 61 3e-08
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 61 3e-08
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 61 3e-08
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 61 3e-08
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 61 3e-08
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 60 4e-08
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 60 4e-08
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 60 4e-08
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 60 4e-08
UniRef50_Q4N4Z2 Cluster: ATP-dependent RNA helicase, putative; n... 60 4e-08
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 60 4e-08
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 60 4e-08
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 60 4e-08
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 60 4e-08
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 60 4e-08
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 60 6e-08
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 60 6e-08
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 60 6e-08
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 60 6e-08
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 60 6e-08
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 60 6e-08
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 60 6e-08
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 60 6e-08
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 60 8e-08
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 60 8e-08
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 60 8e-08
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 60 8e-08
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 60 8e-08
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 8e-08
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 60 8e-08
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 60 8e-08
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 60 8e-08
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 60 8e-08
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 60 8e-08
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 60 8e-08
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 60 8e-08
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 60 8e-08
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 60 8e-08
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 60 8e-08
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 60 8e-08
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 60 8e-08
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 60 8e-08
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 60 8e-08
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 8e-08
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 60 8e-08
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 60 8e-08
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 60 8e-08
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 60 8e-08
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 60 8e-08
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 59 1e-07
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 59 1e-07
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 59 1e-07
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 59 1e-07
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 59 1e-07
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 59 1e-07
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 59 1e-07
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 59 1e-07
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 59 1e-07
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 59 1e-07
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 59 1e-07
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 59 1e-07
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 59 1e-07
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 59 1e-07
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 59 1e-07
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 59 1e-07
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 59 1e-07
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 59 1e-07
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 59 1e-07
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 59 1e-07
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 141 bits (342), Expect = 1e-32
Identities = 64/85 (75%), Positives = 77/85 (90%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFEKPSAIQQRAI+PCI+G DVIAQAQSGTGK ATF+ISILQQ++ +E QAL++APTR
Sbjct: 52 GFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTR 111
Query: 435 ELAQQIQKVVIALGDHLNAKCHACM 509
ELAQQIQKV++ALGD++ A CHAC+
Sbjct: 112 ELAQQIQKVILALGDYMGATCHACI 136
Score = 109 bits (262), Expect = 7e-23
Identities = 50/80 (62%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 GGTNVREDIRQLESGV-HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 685
GGTNVR ++++L++ H+VVGTPGRV+DM+ RR L IK+FVLDEADEMLSRGFKDQ
Sbjct: 137 GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQ 196
Query: 686 IHDVFKMLSADVQVILLSAT 745
I+++F+ L+ +QV+LLSAT
Sbjct: 197 IYEIFQKLNTSIQVVLLSAT 216
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/49 (55%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Frame = +1
Query: 112 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYA 252
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYA
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYA 50
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 132 bits (319), Expect = 9e-30
Identities = 62/85 (72%), Positives = 74/85 (87%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFEKPSAIQQRAI I+GRDVIAQ+QSGTGK ATFSIS+LQ +D +RE QALI+APTR
Sbjct: 57 GFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTR 116
Query: 435 ELAQQIQKVVIALGDHLNAKCHACM 509
ELA QIQK ++ALGD++N +CHAC+
Sbjct: 117 ELAVQIQKGLLALGDYMNVQCHACI 141
Score = 111 bits (267), Expect = 2e-23
Identities = 51/79 (64%), Positives = 64/79 (81%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGTNV EDIR+L+ G HVV GTPGRV+DMI RR+L IK+ VLDEADEML++GFK+QI
Sbjct: 142 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 201
Query: 689 HDVFKMLSADVQVILLSAT 745
+DV++ L QV+L+SAT
Sbjct: 202 YDVYRYLPPATQVVLISAT 220
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 115 bits (277), Expect = 1e-24
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFEKPSAIQQRAI+PCI+G DVIAQAQSGTGK ATF ISILQ+IDTS++E QALI+APTR
Sbjct: 49 GFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTR 108
Query: 435 ELAQQIQKV 461
ELAQQ K+
Sbjct: 109 ELAQQEWKL 117
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/38 (68%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
Frame = +1
Query: 142 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYA 252
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YA
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYA 47
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 115 bits (277), Expect = 1e-24
Identities = 51/81 (62%), Positives = 67/81 (82%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTRE 437
FEKPSA+QQRA++P IQG DVIAQAQSGTGK + F++++ Q +DTS RE QALI +PTRE
Sbjct: 296 FEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTSMFALTVYQMVDTSNREVQALISSPTRE 355
Query: 438 LAQQIQKVVIALGDHLNAKCH 500
LA Q +KV++A+GD +N + H
Sbjct: 356 LASQTEKVILAIGDSVNIQAH 376
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 115 bits (277), Expect = 1e-24
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
G EKPSAIQQ+ I+P +G DVI QAQSGTGK ATF ILQQ++ + +CQAL++APTR
Sbjct: 31 GIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQALVLAPTR 90
Query: 435 ELAQQIQKVVIALGDHLNAKCH 500
ELAQQI+KV+ ALGDHLN K +
Sbjct: 91 ELAQQIEKVMRALGDHLNVKIY 112
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 111 bits (267), Expect = 2e-23
Identities = 51/79 (64%), Positives = 64/79 (81%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGTNV EDIR+L+ G HVV GTPGRV+DMI RR+L IK+ VLDEADEML++GFK+QI
Sbjct: 121 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 180
Query: 689 HDVFKMLSADVQVILLSAT 745
+DV++ L QV+L+SAT
Sbjct: 181 YDVYRYLPPATQVVLISAT 199
Score = 79.4 bits (187), Expect = 9e-14
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFEKPSAIQQRAI I+GRDVIAQ+QSGTGK ATFS+S+LQ +D
Sbjct: 57 GFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLD--------------- 101
Query: 435 ELAQQIQKVVIALGDHLNAKCHACM 509
IQ ++ALGD++N +CHAC+
Sbjct: 102 -----IQG-LLALGDYMNVQCHACI 120
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 107 bits (258), Expect = 2e-22
Identities = 51/65 (78%), Positives = 59/65 (90%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFEKPSAIQQRAI+PCI+G DVIAQAQSGTGK ATF+ISILQQ++ +E QAL++APTR
Sbjct: 54 GFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTR 113
Query: 435 ELAQQ 449
ELAQQ
Sbjct: 114 ELAQQ 118
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYA 252
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYA
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYA 52
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 105 bits (251), Expect = 2e-21
Identities = 50/72 (69%), Positives = 62/72 (86%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFEKPSAIQQ+AI+PCI+G DVIAQ+QSGTGK AT+ I+ LQ+ID + QA+I+APTR
Sbjct: 40 GFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAALQRIDMMKEDTQAIILAPTR 99
Query: 435 ELAQQIQKVVIA 470
ELA QIQKVV++
Sbjct: 100 ELANQIQKVVLS 111
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = +2
Query: 536 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 715
R+L + + VV + RV+D++ RRA+ A I+L VLDEAD+ML GFKDQIH++F L
Sbjct: 99 RELANQIQKVVLS--RVFDVLARRAVSAKAIRLLVLDEADQMLGNGFKDQIHEIFCKLPT 156
Query: 716 DVQVILLSAT 745
+VQ ILLSAT
Sbjct: 157 NVQAILLSAT 166
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 104 bits (250), Expect = 2e-21
Identities = 49/85 (57%), Positives = 64/85 (75%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFE+PSAIQQ+AI P I G+DV+AQAQSGTGK TF+I LQ+ID + R+ Q +I+AP R
Sbjct: 75 GFERPSAIQQKAIKPIILGKDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVR 134
Query: 435 ELAQQIQKVVIALGDHLNAKCHACM 509
ELA+QI VV +G +LN + C+
Sbjct: 135 ELAKQIYDVVKGIGQYLNIEAFCCI 159
Score = 85.0 bits (201), Expect = 2e-15
Identities = 35/82 (42%), Positives = 55/82 (67%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C GGT+ +E + + GVH+++ TPGR+ DM+ + L A ++L V+DEAD+ML +GF
Sbjct: 157 CCIGGTSTQETREKCKQGVHIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQGFS 216
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
D ++ KM+ D+Q+ L SAT
Sbjct: 217 DNFAEILKMVPGDIQIALFSAT 238
Score = 34.7 bits (76), Expect = 2.5
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 172 LDTDWDQVVETFDDMNLKEELLRGIYA 252
L +W + VETF+D+ L ++LLRGI++
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFS 73
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 101 bits (243), Expect = 1e-20
Identities = 48/81 (59%), Positives = 62/81 (76%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGT+ +ED ++L GV VVVGTPGRV D+I ++ L + +KLF+LDEADEML RGFKDQI
Sbjct: 205 GGTDPKEDRKRLREGVQVVVGTPGRVLDLIQKKTLVTDHLKLFILDEADEMLGRGFKDQI 264
Query: 689 HDVFKMLSADVQVILLSATNA 751
+ +F+ L D+QV L SAT A
Sbjct: 265 NKIFQNLPHDIQVALFSATMA 285
Score = 98.7 bits (235), Expect = 1e-19
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFEKPS IQQ I+P I+G+D IAQAQSGTGK ATFSI+ LQ IDTS QALI+APTR
Sbjct: 53 GFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALILAPTR 112
Query: 435 ELAQQ-IQKVVIALGDHL 485
ELAQQ I ++ LG +L
Sbjct: 113 ELAQQTITRIFFILGVNL 130
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/92 (46%), Positives = 58/92 (63%)
Frame = +3
Query: 222 QRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIR 401
+R ++ GFEKPS IQ+ AI I GRD++A+A++GTGK A F I L+++ +
Sbjct: 54 KRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLN 113
Query: 402 ECQALIMAPTRELAQQIQKVVIALGDHLNAKC 497
+ QALIM PTRELA Q +VV LG H C
Sbjct: 114 KIQALIMVPTRELALQTSQVVRTLGKHCGISC 145
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = +2
Query: 488 C*MPCL--HGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 661
C + C+ GGTN+R+DI +L VH++VGTPGRV D+ +R+ + LF++DEAD+M
Sbjct: 141 CGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKM 200
Query: 662 LSRGFKDQIHDVFKMLSADVQVILLSAT 745
LSR FK I + L Q +L SAT
Sbjct: 201 LSRDFKTIIEQILSFLPPTHQSLLFSAT 228
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/81 (50%), Positives = 55/81 (67%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + IR L++GV +VVGTPGRV D+I R++L N I VLDEADEML+ GF D
Sbjct: 108 IYGGQPIDRQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFID 167
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ ++ K L D Q +L SAT
Sbjct: 168 DLEEIVKSLKTDRQTLLFSAT 188
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTS--IRECQALIMA 425
+GFE+PS IQ +I ++G D+I QAQ+GTGK A F +I+ D S + +ALI+A
Sbjct: 22 MGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALILA 81
Query: 426 PTRELAQQIQKVVIALGDH 482
PTRELA Q+ + ++ LG H
Sbjct: 82 PTRELAIQVNEELVRLGKH 100
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 86.6 bits (205), Expect = 6e-16
Identities = 42/78 (53%), Positives = 54/78 (69%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LGF +PS IQ AI ++GRDVI QAQ+GTGK A F + +LQ+ID + R QAL++ PT
Sbjct: 23 LGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQRIDAADRSVQALVLCPT 82
Query: 432 RELAQQIQKVVIALGDHL 485
RELA Q+ + AL HL
Sbjct: 83 RELALQVANGLTALAKHL 100
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/81 (40%), Positives = 44/81 (54%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + L G VVVGTPGR+ D I R L +++ VLDEADEML GF++
Sbjct: 108 VYGGQPIEPQASALRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFRE 167
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + VQ SAT
Sbjct: 168 DIERILSEMPEWVQSAFFSAT 188
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 85.8 bits (203), Expect = 1e-15
Identities = 38/81 (46%), Positives = 54/81 (66%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + +R L+ V VV+GTPGRV D I R LH +++ +F+LDEAD+ML GF++
Sbjct: 108 IYGGQPIERQLRALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFRE 167
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I D+F+ D Q IL SAT
Sbjct: 168 DIEDIFRDTPKDRQTILFSAT 188
Score = 73.3 bits (172), Expect = 6e-12
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+GFE+P+ IQ AI + G+DV QAQ+GTGK A F I I++++D + QAL+++PT
Sbjct: 23 MGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIERLDPDNKNVQALVLSPT 82
Query: 432 RELAQQ 449
RELA Q
Sbjct: 83 RELAIQ 88
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFE+PS IQ++AI + GRD++A+A++GTGK A+F I L +I+TS+ QALI+ PTR
Sbjct: 55 GFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTR 114
Query: 435 ELAQQIQKVVIALGDHL 485
ELA Q +V LG H+
Sbjct: 115 ELALQTSQVCKTLGAHI 131
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/79 (41%), Positives = 50/79 (63%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGT +R+DI +L+ VH++VGTPGR+ D+ ++ N +FV+DEAD++LS F I
Sbjct: 141 GGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVI 200
Query: 689 HDVFKMLSADVQVILLSAT 745
+ + QV+L SAT
Sbjct: 201 EQTLALCPQERQVMLFSAT 219
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 84.6 bits (200), Expect = 2e-15
Identities = 38/81 (46%), Positives = 53/81 (65%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ + +R L+SG H+VVGTPGRV D+ITR LH + F+LDEADEML GF D
Sbjct: 129 IYGGASILDQMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVD 188
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + + Q +L SAT
Sbjct: 189 DVTWIMEQAPESAQRVLFSAT 209
Score = 72.9 bits (171), Expect = 8e-12
Identities = 34/78 (43%), Positives = 53/78 (67%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+GF P+ IQ AI ++GRD + +AQ+GTGK A FS+ +L +++ S + QA++MAPT
Sbjct: 44 MGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPT 103
Query: 432 RELAQQIQKVVIALGDHL 485
RELA Q+ + LG ++
Sbjct: 104 RELAIQVAAEIKNLGQNI 121
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 83.8 bits (198), Expect = 4e-15
Identities = 37/83 (44%), Positives = 56/83 (67%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ IR L++G H+VVGTPGR+ D + RR L+A+ + +LDEADEML+ GF++
Sbjct: 104 VYGGESIERQIRDLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFRE 163
Query: 683 QIHDVFKMLSADVQVILLSATNA 751
I + L + Q +L SAT A
Sbjct: 164 DIELILTRLPEERQTVLFSATLA 186
Score = 69.3 bits (162), Expect = 1e-10
Identities = 31/74 (41%), Positives = 49/74 (66%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
+VE +G+ + + IQ++ I + G+D+ QAQ+GTGK A F I ++ +D SI + Q
Sbjct: 12 VVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEHVDISINQTQ 71
Query: 411 ALIMAPTRELAQQI 452
+LI+ PTRELA Q+
Sbjct: 72 SLILCPTRELALQV 85
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 83.8 bits (198), Expect = 4e-15
Identities = 38/81 (46%), Positives = 55/81 (67%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ E IRQL +G H++V TPGR+ D++ +RAL + + V DEAD ML GFKD
Sbjct: 117 VYGGVSIGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKD 176
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+I +V K L + Q +L SAT
Sbjct: 177 EIVEVLKRLPSTRQTLLFSAT 197
Score = 56.0 bits (129), Expect = 1e-06
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 14/92 (15%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI-------- 386
++ R L +++P+ IQ +AI + G+DV+A AQ+GTGK A F++ +L Q+
Sbjct: 12 LINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLHQLLTHQDNLA 71
Query: 387 ---DT---SIRECQALIMAPTRELAQQIQKVV 464
DT + AL++ PTRELAQQ+ +
Sbjct: 72 AQPDTQHINSTPITALVLVPTRELAQQVHSSI 103
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 83.8 bits (198), Expect = 4e-15
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ IR+L GV +VVGTPGR+ D I+RR + + VLDEADEML+ GF D
Sbjct: 105 VYGGQSIDRQIRELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFID 164
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ ++ K +S + +++L SAT
Sbjct: 165 DVEEILKSVSTEKRMLLFSAT 185
Score = 78.6 bits (185), Expect = 2e-13
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKNATFSISILQQIDTSIREC 407
I+E + GF P+ IQ++AI I+G RD++ QAQ+GTGK A F I IL+ ID S R
Sbjct: 13 ILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILETIDESSRNT 72
Query: 408 QALIMAPTRELAQQIQKVV 464
QALI+APTRELA Q+ + +
Sbjct: 73 QALILAPTRELAIQVAEEI 91
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 83.4 bits (197), Expect = 6e-15
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ + QL+ GVH+VVGTPGRV D++ R L + +K FVLDEADEMLS GF D
Sbjct: 105 IYGGQSIDRQMLQLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFID 164
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + D Q L SAT
Sbjct: 165 DVEKILSQAPQDRQTALFSAT 185
Score = 76.2 bits (179), Expect = 8e-13
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = +3
Query: 234 VERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQA 413
VE +LGF P+ IQ +AI + GRDV+ Q+Q+GTGK A FS+ IL+++D + QA
Sbjct: 15 VEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQA 74
Query: 414 LIMAPTRELAQQI 452
+++ PTRELA Q+
Sbjct: 75 IVLTPTRELAIQV 87
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 83.4 bits (197), Expect = 6e-15
Identities = 38/81 (46%), Positives = 55/81 (67%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+GFE+PS IQ +AI +QG+DVI QAQ+GTGK A F + I++++ R QAL++ PT
Sbjct: 24 MGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVERLVPGQRAVQALVLTPT 83
Query: 432 RELAQQIQKVVIALGDHLNAK 494
RELA Q+ + + +G H K
Sbjct: 84 RELAIQVAEEITKIGRHARVK 104
Score = 76.6 bits (180), Expect = 6e-13
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ IR L GV VV+GTPGR+ D + R L + +++ VLDEADEML GF +
Sbjct: 108 IYGGQSIERQIRSLRFGVDVVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIE 167
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + A+ Q +L SAT
Sbjct: 168 DIEKILQNTPAERQTLLFSAT 188
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 82.6 bits (195), Expect = 1e-14
Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCI--QGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMA 425
+GF KPS+IQ+RA+ + Q +++IAQ+QSGTGK ATF +++L +ID + CQ L MA
Sbjct: 66 MGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMA 125
Query: 426 PTRELAQQIQKVVIALGDHLNAKCHACMVAPMSVKI 533
PTREL QI +V I + +N C + +S I
Sbjct: 126 PTRELVNQIAEVAIIMSKFMNNVKITCAIKGLSPDI 161
Score = 33.9 bits (74), Expect = 4.4
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Frame = +2
Query: 530 DIRQLESGVHVVVGTPGRVYDMIT-RRALHANT--IKLFVLDEADEML-SRGFKDQIHDV 697
DI + + +++GTPG + T +L+ N +K+FVLDEAD ++ + F + +
Sbjct: 160 DILEGQINSQIIIGTPGTLKFWTTDNSSLYFNPKKLKVFVLDEADILIETPEFLNIAKRI 219
Query: 698 FKMLSADVQVILLSAT 745
++ + Q++L SAT
Sbjct: 220 KSKVTNNCQILLFSAT 235
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/75 (49%), Positives = 52/75 (69%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LG+E PS IQ + I ++GRDV+ QAQ+GTGK A F++ +L ++D RE Q L++APT
Sbjct: 27 LGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLSRLDLQRREPQVLVLAPT 86
Query: 432 RELAQQIQKVVIALG 476
RELAQQ+ + G
Sbjct: 87 RELAQQVAASFVQYG 101
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/81 (44%), Positives = 44/81 (54%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG RE + L G V+VGTPGRV D + R +L + + VLDEADEML GF D
Sbjct: 112 LCGGQEYREQLSGLRRGAQVIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLRMGFID 171
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ V D Q + SAT
Sbjct: 172 DVKRVVSDTPKDAQRVFFSAT 192
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GF +P +QQRA++P IQGRDV+ Q TGK S+S+L D S+++ Q LI+ TR
Sbjct: 41 GFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLSVLSIFDLSVKKIQVLILQKTR 100
Query: 435 ELAQQIQKVVIALGDHLNAKCHAC 506
+L ++ +++ALG LN HAC
Sbjct: 101 KLTEENAGLIMALGKFLNVSIHAC 124
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/78 (37%), Positives = 52/78 (66%)
Frame = +2
Query: 512 GTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIH 691
G ++++DI ++ GV +V+GTP RV++++ R+ + +K+ +LDEADEML K ++
Sbjct: 127 GNSIQDDISVVQQGVQIVLGTPDRVFELVQRKEISFAHLKMIILDEADEMLIDESKSLVY 186
Query: 692 DVFKMLSADVQVILLSAT 745
+FK L Q +L++AT
Sbjct: 187 CIFKYLPPKPQYVLVTAT 204
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+GFEKP+ IQ+ + +G+D+I QAQ+GTGK A F+I IL +D SI Q L++APT
Sbjct: 19 IGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSNLDCSINRIQHLVIAPT 78
Query: 432 RELAQQIQKVVIALGDHLNAK 494
RELA QI + LG + +K
Sbjct: 79 RELANQIYDQLNILGKYTCSK 99
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + + L SGV++VV TPGR+ D++ + + + IK F LDEADE+L GF ++I
Sbjct: 105 GGVSYEKQKAALNSGVNIVVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLKIGFYNEI 164
Query: 689 HDVFKMLSADVQVILLSAT 745
+ L Q +AT
Sbjct: 165 IKIMNKLPKKRQNFFFTAT 183
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 81.4 bits (192), Expect = 2e-14
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSI---R 401
I++ LG+EKPS IQ++AI P + GRDV+ AQ+GTGK F+ ILQ++ I R
Sbjct: 12 ILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGR 71
Query: 402 ECQALIMAPTRELAQQIQKVVIALGDHL 485
++LI+ PTRELA QIQ+ A G HL
Sbjct: 72 PIRSLILTPTRELALQIQESFEAYGKHL 99
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/81 (37%), Positives = 48/81 (59%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
+ GG + + +L+ GV ++V TPGR+ D+ + + + +++FVLDEAD ML GF
Sbjct: 106 IFGGVGQQPQVDKLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLH 165
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ V K+L A Q + SAT
Sbjct: 166 DVRRVLKLLPAVKQTLFFSAT 186
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 81.0 bits (191), Expect = 3e-14
Identities = 39/81 (48%), Positives = 51/81 (62%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG N+ +RQLE+G +VVGTPGRV+D + R L N + VLDEAD ML GF+
Sbjct: 148 LSGGKNMNRQLRQLENGTQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRP 207
Query: 683 QIHDVFKMLSADVQVILLSAT 745
QI + + + Q +LLSAT
Sbjct: 208 QIERIMRKCPRNRQTLLLSAT 228
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Frame = +3
Query: 231 IVERHIR-LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDT--SIR 401
I+ R ++ GF PS IQ I + G+DVI QA++GTGK A FSI IL+Q+D+ R
Sbjct: 54 IMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILEQLDSLEDCR 113
Query: 402 ECQALIMAPTRELAQQI 452
+ QA+++ PTRELA Q+
Sbjct: 114 DPQAIVIVPTRELADQV 130
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 80.6 bits (190), Expect = 4e-14
Identities = 35/81 (43%), Positives = 54/81 (66%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ E +R LE G ++VGT GRV D I R +L + ++ F+LDEADEML+ GF +
Sbjct: 149 VYGGVSIAEQLRNLEQGGEIIVGTTGRVIDHIERGSLELSYLRYFILDEADEMLNMGFVE 208
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I +F + D +V++ SAT
Sbjct: 209 DIESIFSHANKDARVLMFSAT 229
Score = 56.8 bits (131), Expect = 5e-07
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +3
Query: 246 IRL-GFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKNATFSISILQQIDTSIRECQALI 419
+RL GF P+ IQ AI + G ++IA+A++GTGK A F + ++Q++ + AL+
Sbjct: 61 VRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLIQELGSPCEHPGALV 120
Query: 420 MAPTRELAQQIQKVVIAL 473
+ PTRELA Q+ + +L
Sbjct: 121 LVPTRELAAQVASELSSL 138
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 80.2 bits (189), Expect = 5e-14
Identities = 38/83 (45%), Positives = 58/83 (69%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG ++R+ I++L+ +VVGTPGRV D + R+ L + ++ +LDEADEML GFK+
Sbjct: 104 LIGGADMRDQIKRLKDS-QIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKN 162
Query: 683 QIHDVFKMLSADVQVILLSATNA 751
+I +F+ +S DVQ+ L SAT +
Sbjct: 163 EIDALFERVSPDVQIGLFSATTS 185
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/79 (39%), Positives = 51/79 (64%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
+ F + + IQ RAI ++G+++ ++ +GTGK A+F + IL++I+ + R QA+IMAP
Sbjct: 18 KANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAP 77
Query: 429 TRELAQQIQKVVIALGDHL 485
TRELA QI + G +
Sbjct: 78 TRELAMQIVNQIRIFGSRI 96
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 80.2 bits (189), Expect = 5e-14
Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +2
Query: 500 CLHGGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGF 676
C++GG N ++ + ++ G+HV+V TPGR+ ++I ++ N I + +LDEAD ML GF
Sbjct: 181 CIYGGNPNKKQQVELIQKGIHVIVATPGRLIELIDEGMVNLNKITMLILDEADRMLDMGF 240
Query: 677 KDQIHDVFKMLSADVQVILLSAT 745
+ Q+ D+ + D Q ILLSAT
Sbjct: 241 EPQVRDIVSTIREDRQTILLSAT 263
Score = 46.4 bits (105), Expect = 8e-04
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Frame = +3
Query: 240 RHIRLG---FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQID--TSIRE 404
+H LG F++P+AIQ I + GR+ +A AQ+G+GK + + L ++ I E
Sbjct: 70 KHFPLGPPEFQQPTAIQSEVIPIVLSGRNALAIAQTGSGKTLAYLLPALVHLEQHAMIME 129
Query: 405 C---QALIMAPTRELAQQIQKVVIAL 473
+ LI+ PTREL QI ++ L
Sbjct: 130 SPQPKLLILVPTRELGVQIYDQLLQL 155
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 80.2 bits (189), Expect = 5e-14
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
CL+GGT + + +RQL+ GV V VGTPGRV D++ R AL+ + ++ VLDEAD+ML GF
Sbjct: 209 CLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFA 268
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
+ + + + L Q ++ SAT
Sbjct: 269 EDVEIILEKLPEKRQSMMFSAT 290
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI------DTSIRECQAL 416
G EK IQ+ + P ++GRD+I +A++GTGK F I I+ +I R L
Sbjct: 123 GIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCL 182
Query: 417 IMAPTRELAQQIQK 458
++APTRELA+Q++K
Sbjct: 183 VLAPTRELARQVEK 196
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 79.8 bits (188), Expect = 7e-14
Identities = 37/74 (50%), Positives = 53/74 (71%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
+V ++LGF +P+ IQ++AI + G D+I QAQ+GTGK A F + +L ID S + Q
Sbjct: 66 LVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNNIDFSKKCVQ 125
Query: 411 ALIMAPTRELAQQI 452
AL++APTRELAQQ+
Sbjct: 126 ALVLAPTRELAQQV 139
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG++ + + L G VVVGTPGR+ D+I + +L + +K VLDEADEMLS GF D
Sbjct: 157 VYGGSSYQAQVGGLRRGARVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFID 216
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + D Q +L SAT
Sbjct: 217 DIETILSQTPKDRQTMLFSAT 237
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 79.4 bits (187), Expect = 9e-14
Identities = 35/88 (39%), Positives = 59/88 (67%)
Frame = +3
Query: 222 QRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIR 401
+R ++ +G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++ID
Sbjct: 97 KRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLERIDLKKD 156
Query: 402 ECQALIMAPTRELAQQIQKVVIALGDHL 485
QAL++ PTRELA Q+ ++ I + HL
Sbjct: 157 HIQALVLVPTRELALQVSQISIQIAKHL 184
Score = 53.2 bits (122), Expect(2) = 7e-09
Identities = 20/47 (42%), Positives = 34/47 (72%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 649
GGTN+R+DI +L+ VHVV+ TPGR+ D++ + + +++ V+DE
Sbjct: 194 GGTNLRDDIMRLDETVHVVIATPGRILDLMKKGVAKVDKVQIMVMDE 240
Score = 29.9 bits (64), Expect(2) = 7e-09
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 638 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 745
V +AD++LS+ F + D+ L+ + Q++L SAT
Sbjct: 264 VSPQADKLLSQDFVALVEDIISFLAKNRQILLYSAT 299
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 79.4 bits (187), Expect = 9e-14
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
I+E LG+EKPS IQ I + GRDV+ AQ+G+GK A FS+ +LQ +D ++ Q
Sbjct: 17 ILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQ 76
Query: 411 ALIMAPTRELAQQIQKVVIALGDHL 485
L++APTRELA Q+ + + H+
Sbjct: 77 ILVLAPTRELAVQVAEAMTDFSKHM 101
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/81 (39%), Positives = 43/81 (53%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L+GG +R L G +VVGTPGR+ D + R L + + VLDEADEML GF +
Sbjct: 109 LYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIE 168
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + + Q L SAT
Sbjct: 169 DVETIMAQIPEGHQTALFSAT 189
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/81 (46%), Positives = 52/81 (64%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + + + L+ GVHV+VGTPGRV D + R L + +K VLDEADEML GF +
Sbjct: 118 VYGGQSYGQQLAALKRGVHVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIE 177
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ +V + L A QV L SAT
Sbjct: 178 DVEEVLRKLPASRQVALFSAT 198
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/74 (41%), Positives = 49/74 (66%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
+++ ++G+E PS IQ I + GRDV+ QAQ+GTGK A F++ +L + + + Q
Sbjct: 26 VMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTRTVLNQVKPQ 85
Query: 411 ALIMAPTRELAQQI 452
L++APTRELA Q+
Sbjct: 86 VLVLAPTRELAIQV 99
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/92 (44%), Positives = 60/92 (65%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GF PS +Q ++I +QG+D+IAQAQ+GTGK A F+I IL ++ + ++ +ALI+ PTR
Sbjct: 64 GFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPTR 122
Query: 435 ELAQQIQKVVIALGDHLNAKCHACMVAPMSVK 530
ELA QI + ++ LG K CM S+K
Sbjct: 123 ELAMQISEEILKLGRFGRIKT-ICMYGGQSIK 153
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GG +++ LE ++ TPGR+ D + + + ++ VLDE+DEML GF
Sbjct: 145 CMYGGQSIKRQCDLLEKKPKAMIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLDMGFL 204
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
D I ++FK L Q +L SAT
Sbjct: 205 DDIEEIFKFLPNTRQTLLFSAT 226
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 79.0 bits (186), Expect = 1e-13
Identities = 40/82 (48%), Positives = 52/82 (63%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GGT RE L G VV+GTPGR+ D + R+ L + +K VLDEADEML+ GF
Sbjct: 195 CVYGGTPYREQEMGLRGGCDVVIGTPGRMKDHLERKTLMMDKLKFRVLDEADEMLNMGFV 254
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
D + + K S DVQ +L SAT
Sbjct: 255 DDVELILKS-SGDVQTLLFSAT 275
Score = 40.7 bits (91), Expect = 0.038
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI-----------DTSIR 401
GF+ AIQ + + G+DV+ +A++G GK F + I++++ R
Sbjct: 102 GFDALFAIQAETLEIALSGKDVVGRARTGCGKTLAFVLPIVEEMAKISPMPANGRRVQGR 161
Query: 402 ECQALIMAPTRELAQQI 452
+++APTRELA+Q+
Sbjct: 162 RPMCVVLAPTRELAKQV 178
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 78.6 bits (185), Expect = 2e-13
Identities = 39/79 (49%), Positives = 52/79 (65%)
Frame = +3
Query: 246 IRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMA 425
I +GFE+PS IQ +AI + G DVI QAQ+GTGK A F I +++++ T R QALI+
Sbjct: 22 IEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEKVSTG-RHVQALILT 80
Query: 426 PTRELAQQIQKVVIALGDH 482
PTRELA Q+ + L H
Sbjct: 81 PTRELAIQVSGEIQKLSKH 99
Score = 75.4 bits (177), Expect = 1e-12
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ I+ L+ GV VV+GTPGR+ D + R+ L + + +LDEADEML GF D
Sbjct: 107 IYGGQSIVHQIKALKQGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFID 166
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + + + Q +L SAT
Sbjct: 167 DIESILRQVKNERQTLLFSAT 187
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 78.6 bits (185), Expect = 2e-13
Identities = 34/76 (44%), Positives = 53/76 (69%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
G+E+PS IQ+++I ++G+DV+ AQ+GTGK A F++ +L + +RE Q L++APTR
Sbjct: 25 GYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLARTQNEVREPQVLVLAPTR 84
Query: 435 ELAQQIQKVVIALGDH 482
ELAQQ+ V + H
Sbjct: 85 ELAQQVAMAVESYSKH 100
Score = 66.5 bits (155), Expect = 7e-10
Identities = 36/81 (44%), Positives = 45/81 (55%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG++ R L+ G VVGTPGRV D I R L I+ VLDEADEML GF D
Sbjct: 109 IYGGSDFGSQFRALKQGPQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFID 168
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ V + Q+ L SAT
Sbjct: 169 DVDWVLDQVPEKRQIALFSAT 189
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/81 (43%), Positives = 54/81 (66%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ E +++LE+G ++VGTPGR+YD I RR L + + LDEADEML+ GF +
Sbjct: 122 VYGGASMGEQLQKLEAGAEIIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEMLNMGFFE 181
Query: 683 QIHDVFKMLSADVQVILLSAT 745
++ + L D Q +L SAT
Sbjct: 182 EVTRILDNLPKDCQQLLFSAT 202
Score = 76.2 bits (179), Expect = 8e-13
Identities = 38/89 (42%), Positives = 54/89 (60%)
Frame = +3
Query: 216 EPQRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTS 395
EP RR + H G+E+P+ +Q P G+DVI ++++GTGK A F+I IL++I
Sbjct: 29 EPVRRAIAEH---GYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILERIADG 85
Query: 396 IRECQALIMAPTRELAQQIQKVVIALGDH 482
R AL+M PTRELA Q+ + AL H
Sbjct: 86 RRRPSALVMCPTRELAIQVAQEFTALAKH 114
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG +R + +L+ H+VVGTPGRV D++TRRAL ++ VLDEAD ML GF+
Sbjct: 108 VYGGKPLRSQMEKLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRP 167
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + + Q +LLSAT
Sbjct: 168 DIEKILRRCPEERQTLLLSAT 188
Score = 63.7 bits (148), Expect = 5e-09
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Frame = +3
Query: 264 KPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQID--TSIRECQALIMAPTRE 437
+PS IQ I ++GRDV+ QA++GTGK A F I I+++++ + R QALI+ PTRE
Sbjct: 26 QPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRNPQALILTPTRE 85
Query: 438 LAQQIQKVVIAL--GDHLN 488
LA Q++ + L G +N
Sbjct: 86 LAVQVRDEIAKLTHGQRIN 104
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + E + + G+H+VV TPGR+ DM+T++ ++ + VLDEAD ML GF+D+I
Sbjct: 308 GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEI 367
Query: 689 HDVFKMLSADVQVILLSAT 745
+F A Q +L SAT
Sbjct: 368 KSIFYFFKAQRQTLLFSAT 386
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISIL-----QQIDTSIRECQ--- 410
G P+AIQ + I + GRD+I A +G+GK TF + ++ Q++ +
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 411 ALIMAPTRELAQQIQKVVIALGDHL 485
LI+ P+RELA+QI ++I + D L
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDAL 293
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMA 425
+GF KPS IQ+RA+ I +++IAQ+QSGTGK ATF +++L +I T + CQ L MA
Sbjct: 94 MGFYKPSTIQERALSSLISDNPQNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMA 153
Query: 426 PTRELAQQIQKV 461
PTRELA QI+ V
Sbjct: 154 PTRELALQIESV 165
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/81 (46%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + IR L GV V+VGTPGR+ D I R+ A IK+ +LDEADEML GF D
Sbjct: 103 VYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFID 162
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + L+ Q +L SAT
Sbjct: 163 DIEAILNTLTNRQQTLLFSAT 183
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LGFE P+ IQ+ AI ++G +++ QA +GTGK A + + +LQ+I ++ Q LI+ PT
Sbjct: 20 LGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRG-KKAQVLIVTPT 78
Query: 432 RELAQQIQKVVIALGDHLNAKCHA 503
RELA Q+ V LG +L + A
Sbjct: 79 RELALQVADEVAKLGKYLKVRALA 102
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GGT + + +L GV +VVGTPGR+ D++ RRAL + I+ VLDEAD+ML+ GF+
Sbjct: 132 CVYGGTPIGQQESKLRRGVDIVVGTPGRIMDLMNRRALDLSEIEFVVLDEADQMLNVGFE 191
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
+ + + A Q L SAT
Sbjct: 192 EDVEAILHDCPAGRQTFLFSAT 213
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Frame = +3
Query: 276 IQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI--------DTSIRECQALIMAPT 431
IQQ + P + G+DV+ +A++GTGK FS+ +++++ R + +++APT
Sbjct: 51 IQQAVLRPAMDGQDVVGRARTGTGKTLAFSLPVIEKLLSNGRGSGGRGYRNPKCIVLAPT 110
Query: 432 RELAQQIQKVVIALGDHLNAKC 497
RELA+Q++ + L+ C
Sbjct: 111 RELAKQVENEIFITAPTLDTAC 132
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 77.8 bits (183), Expect = 3e-13
Identities = 33/81 (40%), Positives = 52/81 (64%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + I+ L GV +++GTPGRV D I R+ L + + L VLDEAD+ML GF++
Sbjct: 107 VYGGQPIERQIKALSRGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFRE 166
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I ++ + + Q ++LSAT
Sbjct: 167 DIEEILSHIPKERQTVILSAT 187
Score = 61.3 bits (142), Expect = 3e-08
Identities = 29/77 (37%), Positives = 44/77 (57%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+G+E+P+ IQQ I + G DV QA +GTGK A F I ++ + R Q +++ P+
Sbjct: 22 IGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAIELCQPANRNVQTIVLCPS 81
Query: 432 RELAQQIQKVVIALGDH 482
RELA Q+ + L H
Sbjct: 82 RELAVQVGTELNKLAMH 98
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 77.8 bits (183), Expect = 3e-13
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG+ + D LE H+VVGTPGRV MI L + IKLFV+DEADEML GF++
Sbjct: 140 LSGGSPIAADKVALEKKPHIVVGTPGRVEHMININELSMDNIKLFVIDEADEMLKAGFQE 199
Query: 683 QIHDVFKMLS--ADVQVILLSAT 745
Q+ +F+ ++ +VQ+ + SAT
Sbjct: 200 QVKSIFRRITNKDEVQIAMFSAT 222
Score = 73.3 bits (172), Expect = 6e-12
Identities = 36/66 (54%), Positives = 45/66 (68%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+GFE PS IQ+ AI P I GRD+ AQAQSGTGK F+++ LQ D S Q L++A T
Sbjct: 56 IGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQILVLAST 115
Query: 432 RELAQQ 449
RE+A Q
Sbjct: 116 REIAAQ 121
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 77.4 bits (182), Expect = 4e-13
Identities = 37/81 (45%), Positives = 53/81 (65%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ +RQL G HV+VGTPGRV D I R++L+ +++ VLDEADEML GF D
Sbjct: 147 VYGGQSMVVQLRQLARGAHVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFID 206
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + + A+ Q L SAT
Sbjct: 207 DVEWILQHTPAERQTALFSAT 227
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/67 (43%), Positives = 47/67 (70%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+G+E PS IQ I + G D++ +AQ+GTGK A F++ +L ++D +++ Q L++APT
Sbjct: 62 IGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLDRLDLAVKNPQVLVLAPT 121
Query: 432 RELAQQI 452
RELA Q+
Sbjct: 122 RELAIQV 128
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 77.4 bits (182), Expect = 4e-13
Identities = 37/81 (45%), Positives = 51/81 (62%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + +R L+ GVH +VGTPGRV D I ++ L + +K FVLDEADEML GF D
Sbjct: 115 IYGGQSYDIQLRPLKRGVHAIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFID 174
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + + Q+ L SAT
Sbjct: 175 DIKWIMQRIPEQRQIALFSAT 195
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/71 (46%), Positives = 49/71 (69%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+G+E PS IQ++ I + +D+I QAQ+GTGK A F + +L +I+ +I Q LI+APT
Sbjct: 30 IGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDKINLNINAPQLLILAPT 89
Query: 432 RELAQQIQKVV 464
RELA Q+ + V
Sbjct: 90 RELAIQVSEAV 100
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 76.6 bits (180), Expect = 6e-13
Identities = 35/81 (43%), Positives = 53/81 (65%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + R + + LE G H+VVGTPGR+ D + R L+ + ++ VLDEADEML GF+D++
Sbjct: 153 GGMDARREAQALERGCHIVVGTPGRLCDHLGRGRLNLSRLRAVVLDEADEMLDLGFRDEL 212
Query: 689 HDVFKMLSADVQVILLSATNA 751
++ A+ + +L SAT A
Sbjct: 213 EEILDATPAERRTLLFSATIA 233
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI---DTSIRECQA---L 416
G+ + +Q + RD++ AQ+G+GK + +++ + D + + A L
Sbjct: 62 GYTSLTPVQDAVLTADAAERDLLVSAQTGSGKTVAYGLALADTLLGADERLGQAGAPLAL 121
Query: 417 IMAPTRELAQQIQKVVIALGDHLNAKCHACM 509
I+APTRELA Q+Q+ ++ L A+ +C+
Sbjct: 122 IVAPTRELAMQVQQELLWLYGPAGARVVSCI 152
>UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=3;
Paramecium tetraurelia|Rep: Nucleolar RNA helicase II,
putative - Paramecium tetraurelia
Length = 664
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/82 (41%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GGT++R I Q+ G +VVGTPGR+ D++ R+ L + I++ VLDEAD+ML+ GF++
Sbjct: 132 IYGGTDLRNQIDQVRQGCEIVVGTPGRIQDLLERKVLKLDEIQVVVLDEADQMLNFGFQE 191
Query: 683 QIHDVFKMLS-ADVQVILLSAT 745
I + + +Q++L SAT
Sbjct: 192 NIEKIMSYFNERKIQMLLFSAT 213
Score = 38.7 bits (86), Expect = 0.16
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +3
Query: 276 IQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI-DTSIRECQ---ALIMAPTRELA 443
IQQ+ G D+I Q ++G+GK + + IL++I +++ + L++ PTRELA
Sbjct: 51 IQQQCFETIYNGDDIIGQDRTGSGKTLAYCLPILERIRGLGLKQNKNPYVLVLLPTRELA 110
Query: 444 QQI 452
Q+
Sbjct: 111 IQV 113
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 76.6 bits (180), Expect = 6e-13
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + I+ L+ GV +++GTPGRV D I R L N IK +LDEADEML GF++
Sbjct: 107 VYGGQPIDRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFRE 166
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + + + Q +L SAT
Sbjct: 167 DIEYILEDIPYERQFLLFSAT 187
Score = 69.3 bits (162), Expect = 1e-10
Identities = 35/78 (44%), Positives = 49/78 (62%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+GFE+ S IQ AI + +DV QAQ+GTGK A F I +L+ ID+ QA+I+ PT
Sbjct: 22 MGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCPT 81
Query: 432 RELAQQIQKVVIALGDHL 485
RELA Q+ + + L +L
Sbjct: 82 RELAIQVAEELRKLSVYL 99
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 76.6 bits (180), Expect = 6e-13
Identities = 33/77 (42%), Positives = 51/77 (66%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+GFE+ + IQ I +QG+D+I QAQ+GTGK A F + +L ++DT Q +++APT
Sbjct: 20 MGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPT 79
Query: 432 RELAQQIQKVVIALGDH 482
RELA Q+ + + +G H
Sbjct: 80 RELAIQVGEELYKIGKH 96
Score = 72.9 bits (171), Expect = 8e-12
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ IR L+ H++VGTPGR+ D I R+ L ++ VLDEADEML+ GF +
Sbjct: 104 IYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIE 163
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + Q +L SAT
Sbjct: 164 DIEAILTDVPETHQTLLFSAT 184
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/81 (45%), Positives = 51/81 (62%)
Frame = +3
Query: 261 EKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTREL 440
+KPSA+ QR I+P G D+I Q+ GT T ILQ++D + ECQAL++ PT +L
Sbjct: 69 DKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDL 126
Query: 441 AQQIQKVVIALGDHLNAKCHA 503
A + Q V+ LG L+AK HA
Sbjct: 127 AHETQNVIGVLGQFLSAKAHA 147
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/79 (50%), Positives = 51/79 (64%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGT+ ED + L +GV V VGTP V M+ RAL + I++FVLDEADE+L RGFKDQI
Sbjct: 150 GGTSAHEDQQILSTGVQVAVGTPCHVLGMLQGRALCPDHIRMFVLDEADEVL-RGFKDQI 208
Query: 689 HDVFKMLSADVQVILLSAT 745
H + + L Q SA+
Sbjct: 209 HGIIQFLPTKTQFGFFSAS 227
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 76.2 bits (179), Expect = 8e-13
Identities = 37/79 (46%), Positives = 49/79 (62%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + RE LE+GV +VVGTPGR+ D + R + + +K VLDEAD+ML GF D+I
Sbjct: 152 GGQSGREQADALENGVQIVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEI 211
Query: 689 HDVFKMLSADVQVILLSAT 745
V + L Q +L SAT
Sbjct: 212 KTVMRDLPGSRQTVLFSAT 230
Score = 69.7 bits (163), Expect = 7e-11
Identities = 36/78 (46%), Positives = 50/78 (64%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LGFE + IQQ +I + G+D+I QA++G+GK A FS+ IL +I+ QALI+ PT
Sbjct: 65 LGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQALILCPT 124
Query: 432 RELAQQIQKVVIALGDHL 485
RELA Q+ + LG L
Sbjct: 125 RELASQVVTEIRKLGRRL 142
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 76.2 bits (179), Expect = 8e-13
Identities = 36/67 (53%), Positives = 50/67 (74%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+G+E+PS IQ +AI + G D+I QAQ+GTGK A F++ +L +ID + RE Q LI+APT
Sbjct: 41 VGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQLLILAPT 100
Query: 432 RELAQQI 452
RELA Q+
Sbjct: 101 RELALQV 107
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + ++ L G ++V TPGR+ D + R +T+K VLDEADEML GF +
Sbjct: 126 VYGGAPMGPQLKALRQGAQILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLKLGFME 185
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ +F L Q +L SAT
Sbjct: 186 DLEVIFAALPESRQTVLFSAT 206
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 76.2 bits (179), Expect = 8e-13
Identities = 40/95 (42%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRE-- 404
IV+ I+LG+E P+ IQQ AI + GRDV+ QAQ+GTGK A F++ ++ +D + R+
Sbjct: 18 IVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINNMDLASRDRA 77
Query: 405 CQALIMAPTRELAQQIQKVVIALGDHLNAKCHACM 509
Q L++APTRELA Q+ + A ++ AC+
Sbjct: 78 PQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACI 112
Score = 74.5 bits (175), Expect = 3e-12
Identities = 38/82 (46%), Positives = 49/82 (59%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GG IR L+ GV VVVGT GRV D I + L + ++ VLDEADEML GF
Sbjct: 111 CIYGGQEYGSQIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFI 170
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
D + V +S + Q +L SAT
Sbjct: 171 DDVKFVLSHVSDECQRLLFSAT 192
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 76.2 bits (179), Expect = 8e-13
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ IR L+ +++VGTPGR+ D I RR + N + V+DEADEML+ GF D
Sbjct: 105 IYGGQDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFID 164
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + ++ Q +L SAT
Sbjct: 165 DIESILSNVPSEHQTLLFSAT 185
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/82 (41%), Positives = 53/82 (64%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
R+GFE+ + IQ + I + +DVI QAQ+GTGK A F I ++++I+ QA+++AP
Sbjct: 20 RMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAP 79
Query: 429 TRELAQQIQKVVIALGDHLNAK 494
TRELA Q+ + + +G AK
Sbjct: 80 TRELAIQVSEELYKIGQDKRAK 101
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 76.2 bits (179), Expect = 8e-13
Identities = 40/89 (44%), Positives = 57/89 (64%)
Frame = +3
Query: 228 RIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIREC 407
+IVE +GF+ P+ IQ +AI +Q RDVI AQ+G+GK A F+I ILQ + + +
Sbjct: 114 QIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPF 173
Query: 408 QALIMAPTRELAQQIQKVVIALGDHLNAK 494
A ++APTRELA QI + V ALG + +
Sbjct: 174 FACVLAPTRELAYQISQQVEALGSTIGVR 202
Score = 41.9 bits (94), Expect = 0.017
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQ 685
GG ++ L HV+V TPGR+ D + + ++ V+DEAD +L F
Sbjct: 208 GGMDMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPI 267
Query: 686 IHDVFKMLSADVQVILLSAT 745
I + + + + + +L SAT
Sbjct: 268 IDKLLQSIPRERRTMLFSAT 287
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 75.8 bits (178), Expect = 1e-12
Identities = 32/81 (39%), Positives = 54/81 (66%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG+++ IR L+ GVH++V TPGR+ D++ R+ + +T+ V+DEADEML+ GF D
Sbjct: 106 VYGGSSIDSQIRSLKRGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTD 165
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I+ + + + +L SAT
Sbjct: 166 SINAILADVPKERNTLLFSAT 186
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
+G+E P +Q+ I + + DV+A AQ+GTGK A F + +LQQID R Q+LI+ P
Sbjct: 20 MGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCP 79
Query: 429 TRELAQQI 452
TREL QI
Sbjct: 80 TRELCLQI 87
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/77 (42%), Positives = 52/77 (67%)
Frame = +3
Query: 246 IRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMA 425
+ +GF + IQ I P + G+DV+ +AQ+GTGK A F + L +IDTSI++ Q +++A
Sbjct: 31 LSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVLA 90
Query: 426 PTRELAQQIQKVVIALG 476
PTRELA Q+ + + + G
Sbjct: 91 PTRELAMQVAEAIESFG 107
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L+GG + +QLE G VVVGTPGR+ D + R++L + +++ VLDEADEML+ GF +
Sbjct: 118 LYGGQSYGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLE 177
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + Q+ L SAT
Sbjct: 178 DIQWILDHIPKTAQMCLFSAT 198
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/92 (41%), Positives = 58/92 (63%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
L + KP+ IQ +AI P ++G D+I AQ+G+GK A F+I IL ++ A I+APT
Sbjct: 99 LNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPT 158
Query: 432 RELAQQIQKVVIALGDHLNAKCHACMVAPMSV 527
RELAQQI++ +LG + + C+V M++
Sbjct: 159 RELAQQIKETFDSLGSLMGVR-STCIVGGMNM 189
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGF 676
C+ GG N+ + R L H+++ TPGR+ D + + +K V+DEAD +L F
Sbjct: 182 CIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEF 241
Query: 677 KDQIHDVFKML-SADVQVILLSAT 745
+ + K++ + + L SAT
Sbjct: 242 GPVLDRILKIIPTQERTTYLFSAT 265
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/81 (45%), Positives = 48/81 (59%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG ++QL SG VVVGTPGR+ D I + L N +K F+LDEADEML GF +
Sbjct: 109 LCGGQEYGRQLKQLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIE 168
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + + L Q+ L SAT
Sbjct: 169 DVETILEKLPEKKQMALFSAT 189
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/65 (55%), Positives = 44/65 (67%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTRE 437
F PS IQ + I +QGRD IA AQ+GTGK A F++ ILQ + I QALI+APTRE
Sbjct: 26 FITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPILQNLSPEISTTQALILAPTRE 85
Query: 438 LAQQI 452
LA Q+
Sbjct: 86 LAIQV 90
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LG+E P+ IQ +AI+ + G DV+ AQ+GTGK A FS+ +L +IDT+ + QAL++ PT
Sbjct: 23 LGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLSRIDTTKNKPQALVLCPT 82
Query: 432 RELAQQI 452
RELA Q+
Sbjct: 83 RELAIQV 89
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/81 (43%), Positives = 48/81 (59%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++R +R L+ V+VGTPGRV D + R L + +K VLDEADEML GF +
Sbjct: 108 IYGGADMRNQLRALKQNPQVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIE 167
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + D Q L SAT
Sbjct: 168 DIDWILEHTPKDKQTALFSAT 188
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 75.4 bits (177), Expect = 1e-12
Identities = 33/81 (40%), Positives = 54/81 (66%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG N+ + L G+ +VV TP R+YD++ RRA+ +I+ FV+DE D ML GFK
Sbjct: 112 VYGGVNINTQHQDLMQGLDIVVATPRRLYDLVLRRAVQLKSIQKFVIDEVDVMLDLGFKF 171
Query: 683 QIHDVFKMLSADVQVILLSAT 745
Q++++ ++L + Q I+ SAT
Sbjct: 172 QVNNIIELLPKNRQSIMFSAT 192
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = +3
Query: 192 SCRNLR*HEPQRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSIS 371
S ++L + P R +E L F+ P+ IQ++A + GRDV+ AQ+GTGK + +
Sbjct: 10 SFQDLNLNTPLRNALED---LNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLP 66
Query: 372 ILQQIDTS-IRECQALIMAPTRELAQQIQKVVIALGDHLNAK 494
+L+ + S + + LIM PTREL Q+ + + L ++N +
Sbjct: 67 LLRMLKYSEQKNPRILIMVPTRELVVQVVEEIEKLAKYINLR 108
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/79 (43%), Positives = 53/79 (67%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + + +++ GV +++GTPGRV D++++ + + I FVLDE D ML RGF+DQ+
Sbjct: 222 GGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQV 281
Query: 689 HDVFKMLSADVQVILLSAT 745
+F+ LS QV+L SAT
Sbjct: 282 MQIFQALS-QPQVLLFSAT 299
Score = 51.6 bits (118), Expect = 2e-05
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDT--------SIRECQ 410
G++ P+ IQ +AI + G+ ++A A +G+GK A+F + I+ + T R
Sbjct: 129 GYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPL 188
Query: 411 ALIMAPTRELAQQIQKVVIALGDHLNAKCHACMVA--PMSVKIF 536
A+++APTREL Q++ LG L K A +V PMS +++
Sbjct: 189 AMVLAPTRELCVQVEDQAKMLGKGLPFKT-ALVVGGDPMSGQLY 231
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 74.9 bits (176), Expect = 2e-12
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + +R L +V+ TPGR+ D + R ++H + IK+ VLDEADEML GF++
Sbjct: 112 IYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDMGFRE 171
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + K AD Q I+ SAT
Sbjct: 172 DMEFILKDTPADRQTIMFSAT 192
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/71 (42%), Positives = 47/71 (66%)
Frame = +3
Query: 246 IRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMA 425
+ +GFE+ S IQ AI ++G+D+I AQ+GTGK A F+I ++ ++ + QALI+
Sbjct: 25 LEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIELLEVESKHLQALILC 84
Query: 426 PTRELAQQIQK 458
PTREL Q+ +
Sbjct: 85 PTRELVIQVSE 95
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GGT+ R I L GV VVVGTPGRV D + + L + + VLDEADEML GF D
Sbjct: 174 VYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFID 233
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + + L + QV+L SAT
Sbjct: 234 DVEWILEQLPKERQVVLFSAT 254
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/66 (43%), Positives = 47/66 (71%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
G+ PS IQ+ A + GRD++ QAQ+GTGK A F++ +L+++++ + Q L++APTR
Sbjct: 90 GYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTR 149
Query: 435 ELAQQI 452
ELA Q+
Sbjct: 150 ELAMQV 155
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/79 (44%), Positives = 51/79 (64%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG ++R++ R LE G H+VV TPGR+ D ITR ++ + + VLDEADEML GF++ +
Sbjct: 112 GGMDMRDERRALERGAHIVVATPGRLRDHITRGSIDLSGVAAVVLDEADEMLDLGFREDL 171
Query: 689 HDVFKMLSADVQVILLSAT 745
+ + D Q +L SAT
Sbjct: 172 EFILEETPEDRQTLLFSAT 190
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI---DTSIRECQ--- 410
R G+ + +Q+ P + G D++ AQ+G+GK F ++I I D +
Sbjct: 19 RRGYTSLTPVQEAVSNPELAGADLLVSAQTGSGKTVGFGLAIAPTILGEDGTFERAASPL 78
Query: 411 ALIMAPTRELAQQIQKVVIALGDHLNAKCHACM 509
AL++APTRELA Q+++ + L A +C+
Sbjct: 79 ALVIAPTRELALQVKRELSWLYGDAGAVLASCV 111
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/81 (38%), Positives = 54/81 (66%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + E I++LE+ H++V TPGR+ D+I R+A++ + +K +LDEADEML+ GF
Sbjct: 105 VYGGKKIEEQIKKLETPKHILVATPGRLLDLIARKAVNLSNLKYLILDEADEMLNMGFLP 164
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + K+ + +L ++T
Sbjct: 165 DIDKIMKIAKPTARKLLFTST 185
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/65 (47%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +3
Query: 267 PSAIQQRAIMPCIQG-RDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTRELA 443
PS IQQ+AI + ++V+ AQ+GTGK A F + +LQQI+ S+++ Q L++ PTREL
Sbjct: 24 PSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVLQQINPSLQQTQVLVLVPTRELG 83
Query: 444 QQIQK 458
QQ+ K
Sbjct: 84 QQVAK 88
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/67 (53%), Positives = 46/67 (68%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LGFE PS IQQ I + G DV+ AQ+G+GK A F++ +L QID S + Q L+MAPT
Sbjct: 23 LGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPT 82
Query: 432 RELAQQI 452
RELA Q+
Sbjct: 83 RELAIQV 89
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/81 (45%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L+GG +R L+ G VVVGTPGR+ D I R L+ + ++ VLDEADEML GF D
Sbjct: 108 LYGGQRYDIQLRALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFID 167
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ V L + Q L SAT
Sbjct: 168 DVETVMAELPENHQTALFSAT 188
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/79 (45%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Frame = +3
Query: 246 IRLGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKNATFSISILQQIDTSIRECQALI 419
I GF+KPS IQ++A+ + R++I Q+QSGTGK A F++++L ++D +I QA+
Sbjct: 164 IAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAIC 223
Query: 420 MAPTRELAQQIQKVVIALG 476
+AP+RELA+QIQ+V+ +G
Sbjct: 224 IAPSRELARQIQEVIDQIG 242
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = +2
Query: 560 VVVGTPGRVYDMITR--RALHANTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSADVQVI 730
+++GTPG + DM+ R R L I++ VLDEADE+++ +G +Q + ++L +VQ +
Sbjct: 267 ILIGTPGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQGLGEQTFRIKQLLPPNVQNV 326
Query: 731 LLSAT 745
L SAT
Sbjct: 327 LFSAT 331
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L+GG N E +R+L+ G H++V TPGR+ DMITR + I+ VLDEAD ML GF+
Sbjct: 412 LYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEP 471
Query: 683 QIHDVFKML----SADVQVILLSAT 745
QI + + L + Q ++ SAT
Sbjct: 472 QIRRIVEQLNMPPTGQRQTLMFSAT 496
Score = 50.8 bits (116), Expect = 4e-05
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
Frame = +3
Query: 231 IVERHIRLG-FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI------- 386
I+ ++ L ++KP+ +Q+ AI I GRD++A AQ+G+GK A F + IL Q+
Sbjct: 305 IIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVP 364
Query: 387 -DTSIRECQ-------ALIMAPTRELAQQI 452
S R+ L++APTRELA QI
Sbjct: 365 PPQSTRQYSRRKQYPLGLVLAPTRELATQI 394
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = +3
Query: 225 RRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRE 404
++++ + GF KPS IQ ++I G D+I +A+SGTGK A F I L+ ID I
Sbjct: 33 QQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALEMIDIKISS 92
Query: 405 CQALIMAPTRELAQQIQKVVIALG 476
Q +I+APTRE+A QI++V+ +LG
Sbjct: 93 VQVIILAPTREIAIQIKEVIASLG 116
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + D ++L S H+ +G PGRV +I + L + ++LFVLDEAD+++ F+ I
Sbjct: 129 GGVAMDIDRKKL-SNCHIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEESFQKDI 187
Query: 689 HDVFKMLSADVQVILLSAT 745
+ ++ L + QVI SAT
Sbjct: 188 NYIYAKLPPNRQVISSSAT 206
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +2
Query: 506 HGGTNVREDIRQLESG-VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
+GGT V D++ L G V VV+GTPGR+ D+I R AL + ++ FVLDE D ML FK+
Sbjct: 72 YGGTKVFGDLKVLRGGKVDVVIGTPGRIKDLIERGALKTDDVRYFVLDEVDVMLDMNFKE 131
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I ++ L + QV +SAT
Sbjct: 132 DIDFIYSQLPEEKQVFFVSAT 152
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = +3
Query: 303 IQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTRELAQQIQKVVIALGDH 482
+QGRD + QA++GTGK A F + IL + + ALI+APTRELA QI+ +
Sbjct: 7 LQGRDCLIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPTRELALQIRDNFRDFARY 63
Query: 483 LNAKCHA 503
LN + A
Sbjct: 64 LNVRTFA 70
>UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;
n=1; uncultured marine bacterium 66A03|Rep: Putative
cold-shock dead-box protein A - uncultured marine
bacterium 66A03
Length = 659
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/79 (46%), Positives = 49/79 (62%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + R + R LESG H+VVGTPGR+ D I R L + IK VLDEADEML GF++ +
Sbjct: 110 GGMDPRAERRTLESGAHIVVGTPGRLRDHIERGVLRLSDIKAVVLDEADEMLDMGFREDL 169
Query: 689 HDVFKMLSADVQVILLSAT 745
+ + + +L SAT
Sbjct: 170 TFILGKAPVERRTLLFSAT 188
Score = 38.7 bits (86), Expect = 0.16
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Frame = +3
Query: 315 DVIAQAQSGTGKNATFSISILQQIDTSIRECQ------ALIMAPTRELAQQIQKVVIALG 476
D++ AQ+G+GK F ISI + E A+I+APTRELA Q++K + L
Sbjct: 39 DLLVSAQTGSGKTLAFGISIATTLLAEKMEFDRPKIPLAIIIAPTRELALQVRKELEWLY 98
Query: 477 DHLNAKCHACM 509
A+ +C+
Sbjct: 99 VRTKAQFASCV 109
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 74.5 bits (175), Expect = 3e-12
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LG+E + IQ I ++GRDV+ AQ+GTGK A F++ IL ID +R QAL++ PT
Sbjct: 27 LGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILANIDVKVRSPQALVLCPT 86
Query: 432 RELAQQIQKVVIALG 476
RELAQQ+ + + G
Sbjct: 87 RELAQQVAEAFRSYG 101
Score = 72.9 bits (171), Expect = 8e-12
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
+ GG ++R+ ++ L G H+VV TPGR+ D I RR++ I VLDEADEML GF D
Sbjct: 112 IFGGADMRQQLKSLREGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFID 171
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + + +V L SAT
Sbjct: 172 DVDTILAKTPKERKVALFSAT 192
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/92 (40%), Positives = 60/92 (65%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
L + +P+ IQ AI +QG+D++ A++G+GK A F+I ILQ + T+ + AL++APT
Sbjct: 116 LKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPT 175
Query: 432 RELAQQIQKVVIALGDHLNAKCHACMVAPMSV 527
RELA QI++ ALG + + C++ MS+
Sbjct: 176 RELAFQIKETFDALGSSMGLR-SVCIIGGMSM 206
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGF 676
C+ GG ++ E R L HV++ TPGR+ D + + ++ V+DE D M+ +
Sbjct: 199 CIIGGMSMMEQARDLMRKPHVIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDY 258
Query: 677 KDQIHDVFKMLSADVQVILL 736
I + K + + ++ L
Sbjct: 259 AKAIDQILKQIPSHQRITYL 278
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GGT+ R I L+ V VVVGTPGR+ D I + N+I VLDEADEML+ GF +
Sbjct: 155 IYGGTDYRNQIYALKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLE 214
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + L + Q++L SAT
Sbjct: 215 DIEWIIDQLPKNKQMVLFSAT 235
Score = 63.3 bits (147), Expect = 6e-09
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI-DTSIRECQALIMAPT 431
G++ P+ IQ+ AI + GRD++ QAQ+GTGK A F++ +++++ D + L+M PT
Sbjct: 70 GYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEKLADNKELNAKVLVMTPT 129
Query: 432 RELAQQI 452
RELA Q+
Sbjct: 130 RELATQV 136
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + I QL+ GV V++ TPGR+ D+ +RALH +++ V DEAD ML GF D
Sbjct: 107 VYGGVRIEPQIAQLQEGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFID 166
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + +L Q +L SAT
Sbjct: 167 DVKRIQSLLPVKRQTLLFSAT 187
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI----DTSIRECQALIM 422
G+ + IQ+ AI + D++A AQ+GTGK A F++ +LQ++ T ++ ++LI+
Sbjct: 20 GYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQRLAAKQSTKVQGVRSLIV 79
Query: 423 APTRELAQQIQKVVIALGDHLNAKCHA 503
PTRELA Q+ V LN + A
Sbjct: 80 TPTRELAAQVAISVEIYSTQLNIRSFA 106
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +3
Query: 201 NLR*HEPQRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQ 380
+L+ EP R+++ LG+E PS IQ I + RDV+ QAQ+GTGK A+F++ IL
Sbjct: 11 DLKLSEPLLRVLQE---LGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILA 67
Query: 381 QIDTSIRECQALIMAPTRELAQQI 452
+ID QAL++APTRELA Q+
Sbjct: 68 RIDIKQTTPQALVLAPTRELAIQV 91
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + + L GVHVVVGTPGRV D + + +L + IK VLDEADEML GF D
Sbjct: 110 IYGGQSYGAQLSALRRGVHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFID 169
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + + Q L SAT
Sbjct: 170 DVETILQKTPESRQTALFSAT 190
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GGT + + L GVH VVGTPGRV D I R++L + ++ VLDE DEMLS GF +
Sbjct: 262 VYGGTAMNPQLDALARGVHAVVGTPGRVLDHIRRKSLDLSKVRTVVLDECDEMLSMGFLE 321
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + + Q L SAT
Sbjct: 322 DIRAILRACPKERQTCLFSAT 342
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISIL----QQIDTSIRECQALIM 422
G+ P+ +Q R IQG DV+ Q+Q+G+GK F + L Q D + Q +++
Sbjct: 175 GWTAPTKVQARTYETMIQGTDVLVQSQTGSGKTGAFCLPWLANRFQPGDAAETGVQLIVL 234
Query: 423 APTRELAQQIQKVVIAL 473
PTRELA+Q+ ++ L
Sbjct: 235 LPTRELAKQVCNELVRL 251
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/78 (44%), Positives = 53/78 (67%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LG++ P+AIQ + +QGRD+IA A++G+GK A F + ILQ++ + ALI+APT
Sbjct: 69 LGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQRLLQRTQRFYALILAPT 128
Query: 432 RELAQQIQKVVIALGDHL 485
REL QI + ++A+G L
Sbjct: 129 RELCLQISQQILAMGGTL 146
Score = 47.2 bits (107), Expect = 4e-04
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFK 679
L GG + L HVVVG+PGRV D + + + ++K+ VLDEAD +LS F
Sbjct: 153 LVGGLDHNTQAIALAKKPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFD 212
Query: 680 DQIHDVFKMLS--ADVQVILLSAT 745
+ + + + A+ Q +L SAT
Sbjct: 213 AALQVLLEHVGSPAERQTMLFSAT 236
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ IR L+ HV+VGTPGR+ D I R L + VLDEADEML+ GF +
Sbjct: 104 IYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIE 163
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + A+ Q +L SAT
Sbjct: 164 DIEAILSHVPAERQTLLFSAT 184
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/76 (44%), Positives = 52/76 (68%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
R+GFE+ + IQ + I +Q +DVI QAQ+GTGK A F I I+++++ QAL++AP
Sbjct: 19 RMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAP 78
Query: 429 TRELAQQIQKVVIALG 476
TRELA Q+ + + +G
Sbjct: 79 TRELAIQVSEELYKIG 94
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/79 (41%), Positives = 52/79 (65%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG ++R++ R LE G H+VVGTPGR+ D I R + + I+ VLDEADEML GF++++
Sbjct: 111 GGMDMRDERRALERGAHIVVGTPGRLVDHINRGSFDTSAIRAVVLDEADEMLDLGFREEL 170
Query: 689 HDVFKMLSADVQVILLSAT 745
+ + + + ++ SAT
Sbjct: 171 ELILEDTPKERRTLMFSAT 189
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI----DTSIRECQ---A 413
G+E + +Q A P ++GRD++ A++G+GK F ++I ++ DT +
Sbjct: 19 GYETLTEVQAAATAPELEGRDLLVSARTGSGKTVAFGLAIANELLGGEDTFLIRAATPLG 78
Query: 414 LIMAPTRELAQQIQKVVIALGDHLNAKCHACM 509
LI+APTRELA Q+ + + L + NA+ C+
Sbjct: 79 LIIAPTRELALQVARELRWLYANTNAEIATCV 110
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 73.7 bits (173), Expect = 4e-12
Identities = 31/79 (39%), Positives = 49/79 (62%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG N R +R + G ++VV TPGR+YD ++R ++ T+++ +LDE+D ML GF I
Sbjct: 108 GGLNERSQLRDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTI 167
Query: 689 HDVFKMLSADVQVILLSAT 745
+ + A+ Q +L SAT
Sbjct: 168 KRIIAAMPAERQTLLFSAT 186
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRE--CQALIMAPT 431
F +P+ IQ AI P + G+D++A AQ+GTGK F + +Q + T R+ +ALI+ PT
Sbjct: 22 FTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRALILTPT 81
Query: 432 RELAQQIQKVVIAL 473
RELA QI + ++ +
Sbjct: 82 RELALQINEALLQI 95
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIR-ECQALIMAP 428
LG+ P+ IQ++ I + GRDVI AQ+GTGK A F + ILQ++ R +A+I+ P
Sbjct: 19 LGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQRLMRGPRGRVRAMIVTP 78
Query: 429 TRELAQQIQKVVIALGDH 482
TRELA+QIQ V+ ALG +
Sbjct: 79 TRELAEQIQGVIEALGKY 96
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/81 (34%), Positives = 44/81 (54%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L+GG + I++L GV + V PGR+ D + R L + + +LDEAD+M GF
Sbjct: 104 LYGGVGYQGQIQRLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLP 163
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + ++ A Q +L SAT
Sbjct: 164 DVRRILRLAPAQRQTMLFSAT 184
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/81 (43%), Positives = 48/81 (59%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG + I+ L+ H++VGTPGRV D + +R + +KL VLDEAD ML GF+D
Sbjct: 107 LCGGQPMGPQIQSLKHSPHIIVGTPGRVMDHVEKRRIDLRNVKLRVLDEADRMLDMGFED 166
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ +F VQ +L SAT
Sbjct: 167 DLRIIFGQTPKQVQTLLFSAT 187
Score = 62.5 bits (145), Expect = 1e-08
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
G + S IQ +++ +QG+DVI QAQ+G+GK F I L++I+ + QA+++ PTR
Sbjct: 23 GIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIMLCPTR 82
Query: 435 ELAQQI-QKVVIALGDHLNAKCHA-CMVAPMSVKI 533
ELA+Q+ Q+ A D N K C PM +I
Sbjct: 83 ELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQI 117
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/80 (41%), Positives = 54/80 (67%)
Frame = +2
Query: 506 HGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 685
HGG + ED++ L+ H +VGTPGRV ++ +L I+ FVLDEAD ++++ FK
Sbjct: 113 HGGRWLGEDLKNLKKNFHGIVGTPGRVLHLLQIGSLAITKIRTFVLDEADILMNKNFKID 172
Query: 686 IHDVFKMLSADVQVILLSAT 745
I ++++ L++ VQ+I+ SAT
Sbjct: 173 IFNIYRYLNSKVQIIICSAT 192
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/79 (39%), Positives = 44/79 (55%)
Frame = +3
Query: 270 SAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTRELAQQ 449
S IQ ++P ++GRD+I Q+ SGTGK + I Q+ SI Q LI+ PTREL+ Q
Sbjct: 34 SKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGTSNQLCQSINSPQCLILVPTRELSIQ 93
Query: 450 IQKVVIALGDHLNAKCHAC 506
I+ V L + +C
Sbjct: 94 IRNVFNVLNIYTKNSITSC 112
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/83 (44%), Positives = 53/83 (63%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
+LGF+ PS IQ I ++GRD+IA A++G+GK A+F+I IL Q+ A+I+ P
Sbjct: 21 QLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTP 80
Query: 429 TRELAQQIQKVVIALGDHLNAKC 497
TRELA QI + A+G +N C
Sbjct: 81 TRELAVQIGEQFNAIGAPMNVNC 103
Score = 37.1 bits (82), Expect = 0.47
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 542 LESGVHVVVGTPGRVYDMITRRALHA-NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 718
L+ H++V TPGR+ + A K VLDEAD +L F+ +I + + L
Sbjct: 119 LDKRPHIIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLPPP 178
Query: 719 V--QVILLSAT 745
Q +L SAT
Sbjct: 179 EKRQTLLFSAT 189
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIK---LFVLDEADEMLSR 670
C +GG+N+ I +L+ GV+V+V TPGR+ D++ T++ VLDEAD M
Sbjct: 494 CCYGGSNIENQISELKRGVNVIVATPGRLIDLLAANGGRITTLRRTTFVVLDEADRMFDM 553
Query: 671 GFKDQIHDVFKMLSADVQVILLSAT 745
GF+ QI +F + D Q +L SAT
Sbjct: 554 GFEPQIQKIFTQIRPDKQTVLFSAT 578
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSI-----RECQAL 416
LGF KPS IQ +AI + GRD+I A++G+GK ++ + +++ I + L
Sbjct: 406 LGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGL 465
Query: 417 IMAPTRELAQQIQKVVIALGDHLNAKCHAC 506
+++PTRELA QI+K ++ ++ K C
Sbjct: 466 VLSPTRELALQIEKEILKFSSTMDLKVCCC 495
>UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Chlorobium phaeobacteroides
BS1|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 356
Score = 73.3 bits (172), Expect = 6e-12
Identities = 32/81 (39%), Positives = 52/81 (64%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + + I++L+ HVVV TPGR+ D++ R L + +K VLDEADEM++ GFK
Sbjct: 4 VYGGAPIDDQIQKLKRATHVVVATPGRLIDLLNRGVLSLDDLKYLVLDEADEMINMGFKA 63
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+I ++ K + +L +AT
Sbjct: 64 EIDEILKSCKPAITKLLFTAT 84
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 73.3 bits (172), Expect = 6e-12
Identities = 31/81 (38%), Positives = 59/81 (72%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ + QL+ GV +++ TPGR+ D++ +A++ + +++ VLDEAD+ML+ GFK+
Sbjct: 117 VYGGVSINPQMIQLQ-GVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKE 175
Query: 683 QIHDVFKMLSADVQVILLSAT 745
++ ++FK+L Q +L SAT
Sbjct: 176 EMANIFKLLPQKRQNLLFSAT 196
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDT----SIRECQALIMA 425
+ P IQ++AI ++G+D++ AQ+G+GK A+F + ILQ + T R AL++
Sbjct: 29 YNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQMLQTKPLGKNRHINALVLV 88
Query: 426 PTRELAQQIQKVVIALGDHLNAKCHACMV 512
PTRELA Q+ +V A + L K + V
Sbjct: 89 PTRELAVQVGQVFQAFSNALPNKIKSLAV 117
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 73.3 bits (172), Expect = 6e-12
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L+GG ++ + + LE GV +VVGTPGR+ D + R L + ++ VLDEAD ML GF D
Sbjct: 122 LYGGQSLEKQFKDLEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLD 181
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ ++ K + + L SAT
Sbjct: 182 DVLEIIKRTGENKRTFLFSAT 202
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKNATFSISILQQIDTSIRE-CQALIMAP 428
G+EKP+ IQ+ + + +D+IAQAQ+GTGK A F I +L++ID + +A+I+ P
Sbjct: 37 GYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLERIDFKANKFVKAIIVTP 96
Query: 429 TRELAQQI 452
TRELA QI
Sbjct: 97 TRELALQI 104
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 73.3 bits (172), Expect = 6e-12
Identities = 36/84 (42%), Positives = 54/84 (64%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
I E + G + P+AIQ+ AI ++ +D+I Q+Q+G+GK + + I Q+ID+S RE Q
Sbjct: 14 IAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLPIFQKIDSSKRETQ 73
Query: 411 ALIMAPTRELAQQIQKVVIALGDH 482
ALI+APT EL QI K + L +
Sbjct: 74 ALILAPTHELVMQIDKQIKTLSSN 97
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/78 (35%), Positives = 47/78 (60%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
G N+ I +L+ H++VG+ GRV ++I R+ + ++TIK V+DEAD +L + +
Sbjct: 109 GEVNIVRQIEKLKEKPHIIVGSTGRVLELIKRKKISSHTIKTIVIDEADMLLDQNNLAGV 168
Query: 689 HDVFKMLSADVQVILLSA 742
DV K D Q+++ SA
Sbjct: 169 KDVIKTTMRDRQLMIFSA 186
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 73.3 bits (172), Expect = 6e-12
Identities = 36/87 (41%), Positives = 59/87 (67%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
++E + G+EKPS IQQRAI QG++++ Q+Q+G+GK ATFSI L ++ + + +
Sbjct: 31 LIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSIGTLARLRLTSKTTE 90
Query: 411 ALIMAPTRELAQQIQKVVIALGDHLNA 491
+I++PTRELA Q + + +LG + A
Sbjct: 91 LIIVSPTRELAIQTENTLKSLGANTRA 117
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG ++ D++ L+ G+H V GTPGR+ ++ + A ++ VLDEADEML+ FK I
Sbjct: 120 GGNSLGADVKALQKGIHCVSGTPGRILQLLKEHNIQAEKVQSVVLDEADEMLT-SFKSTI 178
Query: 689 HDVFKMLSADVQVILLSATNA 751
D+ + L +VI+ + +A
Sbjct: 179 MDILQKLPHAQKVIVTATVSA 199
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 72.9 bits (171), Expect = 8e-12
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG + + + L H+VVGTPGR+ D + +++L +++K+ VLDEAD ML GF D
Sbjct: 107 LCGGQPMGQQLDSLVHAPHIVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLDMGFTD 166
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I DV +D Q +L SAT
Sbjct: 167 AIDDVISYTPSDRQTLLFSAT 187
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/69 (40%), Positives = 43/69 (62%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LG+ + + +Q + + G DV A+A++G+GK A F I +L +I S QAL++ PT
Sbjct: 22 LGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLDRIVVSDFTTQALVLCPT 81
Query: 432 RELAQQIQK 458
RELA Q+ K
Sbjct: 82 RELADQVSK 90
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 72.9 bits (171), Expect = 8e-12
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + ++ L G +VV TPGR+ D++ + AL +K VLDEAD ML GF D
Sbjct: 109 IYGGAAINPQMQSLSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFAD 168
Query: 683 QIHDVFKMLSADVQVILLSAT 745
++ D+ +VQ +L SAT
Sbjct: 169 ELDDILDQTPGNVQTLLFSAT 189
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDT----SIRECQALI 419
LG+++P+AIQ +AI ++G D+IA A++G+GK A F + +L+++ + AL+
Sbjct: 19 LGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLEKLHSIPAPGNNLTHALV 78
Query: 420 MAPTRELAQQIQKVV 464
+ PTRELA Q+ + V
Sbjct: 79 LVPTRELAVQVSQSV 93
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 72.9 bits (171), Expect = 8e-12
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
+GFE P+ IQQ++I ++ D I AQ+GTGK A F + +L ID + RE QALI+AP
Sbjct: 31 MGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLDLIDVNSREVQALILAP 90
Query: 429 TRELAQQIQKVVIALGDHL 485
TRELAQQI + + HL
Sbjct: 91 TRELAQQICGQMEQMSKHL 109
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/81 (40%), Positives = 47/81 (58%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG N+ IR + G ++V TPGR+ D++ RR + + +K VLDEADEML+ GFK+ I
Sbjct: 119 GGANIMNQIRDIRRGAQIIVATPGRLMDLMKRREVKLDALKYMVLDEADEMLNMGFKEDI 178
Query: 689 HDVFKMLSADVQVILLSATNA 751
+ + L SAT A
Sbjct: 179 DFILSKSDTGRNIWLFSATMA 199
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 72.9 bits (171), Expect = 8e-12
Identities = 35/79 (44%), Positives = 49/79 (62%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG +V ++ L +G V+V TPGR+ D++ AL N + VLDEAD MLS GF D++
Sbjct: 121 GGVSVNLQMQSLRAGADVLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDEL 180
Query: 689 HDVFKMLSADVQVILLSAT 745
+ V + L A Q +L SAT
Sbjct: 181 NQVLEALPAKKQTLLYSAT 199
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI------DT 392
+ R L + P+ IQ I + GRDV+A A +G+GK A F++ +LQ++ +
Sbjct: 20 LCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPLLQRLFEAKTAEK 79
Query: 393 SIRECQALIMAPTRELAQQIQKVVIALGDHLNAK 494
S + + L++ PTRELAQQ+ ++ H N +
Sbjct: 80 SAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQ 113
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 72.9 bits (171), Expect = 8e-12
Identities = 33/82 (40%), Positives = 49/82 (59%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
CL+GGT+ I L+SGV +V+GTPGR+ D+I N + VLDEAD ML GF+
Sbjct: 263 CLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFE 322
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
++ + ++ Q ++ SAT
Sbjct: 323 PEVRAILSQTASVRQTVMFSAT 344
Score = 53.6 bits (123), Expect = 5e-06
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQA------- 413
GFE+PS IQ A + GRD I A +G+GK F + L + + E A
Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRV 170
Query: 414 LIMAPTRELAQQIQKVVIALG 476
L+++PTRELAQQI V+ G
Sbjct: 171 LVLSPTRELAQQIADVLCEAG 191
Score = 46.8 bits (106), Expect = 6e-04
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLD 646
CL+GGT+ I L+SGV +V+GTPGR+ D+I N + + D
Sbjct: 200 CLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVIAD 248
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/74 (48%), Positives = 53/74 (71%), Gaps = 6/74 (8%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI------DTSIRECQ 410
+LGF P+ IQQ+AI +QGRDV+A AQ+GTGK A + + ++Q + +T+ + +
Sbjct: 20 QLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPR 79
Query: 411 ALIMAPTRELAQQI 452
ALI+APTRELAQQ+
Sbjct: 80 ALILAPTRELAQQV 93
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GGT++R QL GV +++ TPGR+ D + + N +++ VLDEAD ML GF
Sbjct: 111 VYGGTSIRVQQEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLP 170
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + K + + Q +L SAT
Sbjct: 171 DIQRIMKRMPEERQTLLFSAT 191
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
G+ P+ +Q RA P I+G+D+I ++++GTGK A F + +L++I R +ALI+ PTR
Sbjct: 48 GYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEKIPADERRVRALILCPTR 107
Query: 435 ELAQQIQKVVIALGDHLNAKCHA 503
ELA Q+ + L H K A
Sbjct: 108 ELALQVADELKMLAKHKGLKIAA 130
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++++ LE G ++VGTPGRV+D I R L + VLDEADEML++GF +
Sbjct: 131 IYGGASMKQQEDALEEGTPIIVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYE 190
Query: 683 QIHDVFKMLSADVQVILLSAT 745
++ + L QV+L SAT
Sbjct: 191 EVTRILDRLPKTRQVLLFSAT 211
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/66 (48%), Positives = 49/66 (74%)
Frame = +3
Query: 261 EKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTREL 440
+KP+ IQ R I ++GRD+I Q+Q+GTGK +F + I+Q ++ ++E QA+I+APTREL
Sbjct: 23 KKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAIIVAPTREL 82
Query: 441 AQQIQK 458
A QI +
Sbjct: 83 AWQIHE 88
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/79 (32%), Positives = 49/79 (62%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + I +++ +V+GTPGR+ D+ +AL + +K +++DEAD+ML GF ++
Sbjct: 108 GGMDRERQIGRVKVSPQIVIGTPGRILDLFKEQALKPHFVKHYIIDEADQMLDMGFLPEV 167
Query: 689 HDVFKMLSADVQVILLSAT 745
+ + L +Q+++ SAT
Sbjct: 168 DRIAQALPEKLQMMVFSAT 186
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/79 (45%), Positives = 49/79 (62%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + R + + LE G H+VVGTPGR+ D I R AL + +K VLDEADEML GF++ +
Sbjct: 110 GGMDPRAERKALERGCHIVVGTPGRLRDHIERGALDMSQLKAVVLDEADEMLDFGFREDL 169
Query: 689 HDVFKMLSADVQVILLSAT 745
+ A + +L SAT
Sbjct: 170 EYILDAAPASRRTLLFSAT 188
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI---DTSIRE---CQAL 416
G+ + +Q I +GRD++ AQ+G+GK A F +++ + + D AL
Sbjct: 19 GYAALTEVQSAVIAEEAEGRDLLVSAQTGSGKTAAFGMAMAKTLLGDDDQFNRPDLPMAL 78
Query: 417 IMAPTRELAQQIQKVVIALGDHLNAKCHACM 509
I+APTRELA Q+Q+ + L + +C+
Sbjct: 79 IVAPTRELALQVQRELAWLYGEARGQIASCV 109
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/67 (49%), Positives = 50/67 (74%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
L FEKP+ IQ R I ++ ++I Q+Q+GTGK+ F + ++Q ID+ I+E QA+++APT
Sbjct: 22 LNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPT 81
Query: 432 RELAQQI 452
RELAQQ+
Sbjct: 82 RELAQQL 88
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/79 (27%), Positives = 42/79 (53%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGT++ +D ++ + +++GTP R+ D+ LH + V+DEAD M+ G + +
Sbjct: 109 GGTDIEKDRQRCNAQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMIDLGLIEDV 168
Query: 689 HDVFKMLSADVQVILLSAT 745
+ L + + + SAT
Sbjct: 169 DYIAARLEDNANIAVFSAT 187
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ + I + G +++VGTPGR D+I R L+ + + FVLDEADEML GF +
Sbjct: 103 VYGGVSINKQIELILRGANIIVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIE 162
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + +L + Q L SAT
Sbjct: 163 DIKKIINVLPVERQSFLFSAT 183
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/85 (34%), Positives = 50/85 (58%)
Frame = +3
Query: 222 QRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIR 401
+ ++E G+ +P+ +Q AI + G D++ ++++G+GK A + I I+ +
Sbjct: 10 RNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINNTAKE-K 68
Query: 402 ECQALIMAPTRELAQQIQKVVIALG 476
+ALI+ PTRELA Q+ KV ALG
Sbjct: 69 GIRALILLPTRELAVQVAKVSEALG 93
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/71 (47%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
GF++PS IQ++AI + Q D+I QAQ+GTGK A F + I+Q+I+ +++ QALI+ PT
Sbjct: 21 GFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCPT 80
Query: 432 RELAQQIQKVV 464
RELA Q+ + +
Sbjct: 81 RELAIQVNEEI 91
Score = 65.3 bits (152), Expect = 2e-09
Identities = 33/81 (40%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L+GG + + R L+ GV +VV TPGR I L ++++ VLDEADEML+ GF +
Sbjct: 105 LYGGAPIMDQKRALKKGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVE 164
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ V K D V++ SAT
Sbjct: 165 DVEKVLKASPDDRTVLMFSAT 185
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
+GFE PS IQ+ AI + + RD++A AQ+GTGK A F +LQ ID S + Q LI+AP
Sbjct: 19 MGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLLQNIDASSKTTQGLIIAP 78
Query: 429 TRELAQQIQKVVIALGDHL 485
TREL QI + H+
Sbjct: 79 TRELCLQITNEMKLYAKHI 97
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG+N++E R++ G +VV TPGR+ DM+ RR + + VLDEADEML+ GF +
Sbjct: 105 VYGGSNIQEQAREISRGAQIVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLNMGFYE 164
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I ++ D L SAT
Sbjct: 165 DITNILADTPEDKLTWLFSAT 185
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/82 (42%), Positives = 47/82 (57%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GG N I LE G +++ TPGR+ D+I + +TI VLDEAD ML GF+
Sbjct: 389 CVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFE 448
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI V + D Q I+ SAT
Sbjct: 449 PQIRKVMLDIRPDRQTIMTSAT 470
Score = 53.2 bits (122), Expect = 7e-06
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSI--SILQQIDTSIR- 401
++E ++GF KPS IQ +A +QG D+I AQ+GTGK F + I + ++ R
Sbjct: 294 MLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRG 353
Query: 402 ---ECQALIMAPTRELAQQIQKVV 464
L++APTRELA QI+ V
Sbjct: 354 TRGGANVLVLAPTRELALQIEMEV 377
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/84 (45%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGR--DVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMA 425
+GF KPS IQQ A+ P I G ++IAQA++G+GK ATF++++L +++ ++ QAL +
Sbjct: 117 MGFAKPSKIQQCAL-PLILGSCTNIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCIC 175
Query: 426 PTRELAQQIQKVVIALGDHLNAKC 497
PTRELA Q +V+ LG KC
Sbjct: 176 PTRELATQNVQVIQKLGQFTQIKC 199
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 557 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR--GFKDQIHDVFKMLSADVQVI 730
H+ VGTPG+ D + +R ++ + + VLDEADE++++ Q+ + VQ++
Sbjct: 216 HLYVGTPGKTMDFLKKRIMNVTNVVMLVLDEADELINQQNNMGPQVLQIRNFFRGPVQIV 275
Query: 731 LLSAT 745
L SAT
Sbjct: 276 LFSAT 280
>UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 744
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG +VRE Q+ GV +VVGTPGR+ D R AL ++I VLDEAD+ML+ GF++
Sbjct: 179 IYGGVDVREQANQIRDGVEIVVGTPGRIIDQYERGALMFHSIIATVLDEADQMLNFGFQE 238
Query: 683 QIHDVFKMLSAD 718
I +F + D
Sbjct: 239 DIEKIFGFIKND 250
Score = 37.1 bits (82), Expect = 0.47
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Frame = +3
Query: 276 IQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQID-----TSIRECQA---LIMAPT 431
IQ+ G+D+I + ++G+GK FS+ +++++ TSI++ Q L++ PT
Sbjct: 94 IQEHCFQAIQAGKDLIGKDRTGSGKTLGFSLPLIEKLRNEGNFTSIKKKQTPYMLVVVPT 153
Query: 432 RELAQQIQKVVIAL 473
REL Q+ + L
Sbjct: 154 RELCIQVANEINTL 167
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/79 (51%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +3
Query: 255 GFEKPSAIQQRAI--MPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
GF PS IQ AI + R VIAQAQSGTGK FSI +L +ID S + QAL++AP
Sbjct: 110 GFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAP 169
Query: 429 TRELAQQIQKVVIALGDHL 485
TRELA QI V +G +
Sbjct: 170 TRELATQIFNVFKEIGSRI 188
Score = 64.1 bits (149), Expect = 4e-09
Identities = 31/79 (39%), Positives = 45/79 (56%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
G V + + S H+ + TPGR D+I L K+ VLDEAD+MLS F +Q+
Sbjct: 199 GAQRVVDAQARAASHPHICICTPGRALDLIVSGHLRVQNFKMAVLDEADQMLSDNFIEQV 258
Query: 689 HDVFKMLSADVQVILLSAT 745
+D+ + DVQ++L SAT
Sbjct: 259 NDIMEYFPEDVQILLFSAT 277
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 72.1 bits (169), Expect = 1e-11
Identities = 30/80 (37%), Positives = 55/80 (68%)
Frame = +3
Query: 222 QRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIR 401
+R ++ +G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L+++D
Sbjct: 104 KRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKD 163
Query: 402 ECQALIMAPTRELAQQIQKV 461
QA+++ PTRELA Q+ ++
Sbjct: 164 NIQAMVIVPTRELALQVSQI 183
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQID---TSIRECQALIM 422
LG+E+P+ IQ+ A+ P + GRD++ QA +GTGK A F++ +L ++ T QAL++
Sbjct: 75 LGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLLHRLTDDRTGDHGPQALVL 134
Query: 423 APTRELAQQIQKVVIALGDHLNAK 494
PTRELA Q+ + + G L A+
Sbjct: 135 VPTRELAVQVSEAIHRYGRDLGAR 158
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/81 (40%), Positives = 44/81 (54%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + +R L GV VVV TPGR D + R L + + VLDEADEML GF +
Sbjct: 162 VYGGAPIGRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAE 221
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + Q +L SAT
Sbjct: 222 DIDAILEQAPQKRQTVLFSAT 242
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGTN+ D++ L +HV+VGTPGR+ D+ R+ L N +K VLDE D ML GF + +
Sbjct: 159 GGTNINTDMKVLSRKLHVIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLDMGFVNDV 218
Query: 689 HDVFKMLSADVQVILLSAT 745
+ ++ Q +L SAT
Sbjct: 219 KKLVGGMTQREQTMLFSAT 237
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/68 (36%), Positives = 43/68 (63%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
G+E + IQ+++I ++GRD++ + +G+GK F I I++ + + ALI+ PTR
Sbjct: 74 GYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIEHALKNPGQFTALIVTPTR 133
Query: 435 ELAQQIQK 458
ELA QI +
Sbjct: 134 ELALQIDQ 141
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 71.7 bits (168), Expect = 2e-11
Identities = 29/79 (36%), Positives = 50/79 (63%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG++++E ++ GVH+VV TPGR+ D++ +R + + + VLDEAD M+ GF++ +
Sbjct: 165 GGSSIKEQSDAMKRGVHMVVATPGRLMDLLDKRIITLDVCRYLVLDEADRMIDMGFEEDV 224
Query: 689 HDVFKMLSADVQVILLSAT 745
+F + Q +L SAT
Sbjct: 225 RTIFSYFKSQRQTLLFSAT 243
Score = 36.3 bits (80), Expect = 0.83
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISIL-----QQIDTSIRECQ--- 410
G P+ IQ + + + GRD+I A +G+GK F++ I+ Q+ + +
Sbjct: 66 GITHPTPIQVQGLPAVLTGRDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPY 125
Query: 411 ALIMAPTRELAQQIQKVVIALGDHLNA 491
+I+ P+RELA+Q +V+ L A
Sbjct: 126 GMIVVPSRELARQTFEVITHFSRALEA 152
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 71.7 bits (168), Expect = 2e-11
Identities = 30/79 (37%), Positives = 50/79 (63%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG ++R + ++ GVH+VV TPGR+ D++ ++ ++ + + LDEAD ++ GF+D I
Sbjct: 300 GGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDI 359
Query: 689 HDVFKMLSADVQVILLSAT 745
+VF A Q +L SAT
Sbjct: 360 REVFDHFKAQRQTLLFSAT 378
Score = 36.3 bits (80), Expect = 0.83
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Frame = +3
Query: 198 RNLR*HEPQRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATF----- 362
R+LR EP R + G +P+ IQ + + + GRD+I A +G+GK F
Sbjct: 185 RDLRLPEPMLRKLREK---GIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLI 241
Query: 363 SISILQQIDTSIRECQ---ALIMAPTRELAQQIQKVV 464
+++ +++ I + +I+ P+RELA+Q V+
Sbjct: 242 MVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVI 278
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFE+PS +Q + I I G+DV+ QA++GTGK A F +S+L Q+ + L++ TR
Sbjct: 57 GFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTR 116
Query: 435 ELAQQIQKVVIALGDHLNAKCHA 503
ELA QI+ LG N K A
Sbjct: 117 ELAFQIKNEFKRLGKFTNFKVKA 139
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGV-HVVVGTPGRVYDMITRR--ALHANTIKLFVLDEADEMLSRG 673
++GG DI L++ H++V TPGR +I + + I+ F++DE D +LS
Sbjct: 140 VYGGVEESVDIHTLKTKKPHILVATPGRCLSLIKAKPSVIETQNIEYFIIDECDRVLSSN 199
Query: 674 -FKDQIHDVFKMLSADVQVILLSAT 745
+ + ++F L QV++ S T
Sbjct: 200 KMRSDVQNIFYELPRKKQVMMFSGT 224
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/88 (38%), Positives = 58/88 (65%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
+++ + LG E+P+ IQ++AI ++G++VI +A++GTGK + + I+++ID S E Q
Sbjct: 13 VLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPIIEKIDDSKNEMQ 72
Query: 411 ALIMAPTRELAQQIQKVVIALGDHLNAK 494
A+I++PT EL QI V+ L L K
Sbjct: 73 AIILSPTHELGVQINNVLNDLKRGLGKK 100
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L G N++ + +L++ H++VGT GR+ ++I ++ + NTIK V+DE D++L
Sbjct: 106 LVGSGNIKRQMEKLKNKPHILVGTTGRILELINKKKITTNTIKTIVIDEGDKLLDFINIK 165
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ V K D Q ++ SAT
Sbjct: 166 DVKSVVKSCPRDTQKLIFSAT 186
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG I L SGV ++VGTPGR+ D+ ++ L + ++ VLDEAD ML GF D
Sbjct: 216 IYGGVAYEPQIEALRSGVEILVGTPGRLLDLAKQKHLKLDRVRALVLDEADRMLDLGFLD 275
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + +L D Q +L SAT
Sbjct: 276 DVERILAILPEDRQTMLFSAT 296
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI----DTSIRECQALIM 422
G + AIQ+ A+ ++G D+I QA +GTGK F + +L+Q+ + QAL++
Sbjct: 129 GITRAFAIQEYALPIALRGVDLIGQAPTGTGKTLGFGVPLLEQVLAPAEGGDGTPQALVV 188
Query: 423 APTRELAQQIQKVVIALG 476
PTREL Q+ K + A G
Sbjct: 189 VPTRELGIQVAKDLQAAG 206
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMIT---RRALHANTIKLFVLDEADEMLSRG 673
++GG+N+ ++ L+ GV ++VGTPGR+ D++T + + N + VLDEAD +L G
Sbjct: 830 VYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLG 889
Query: 674 FKDQIHDVFKMLSADVQVILLSAT 745
F+ QI+++ + D Q ++SAT
Sbjct: 890 FESQIYNILRNCRKDKQTAMISAT 913
Score = 40.3 bits (90), Expect = 0.051
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI--DTSIRECQ---ALIM 422
F+K IQ + I + GRDVIA A++G+GK ++ +++ + +R ++I+
Sbjct: 743 FKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIIL 802
Query: 423 APTRELAQQIQ 455
PTREL+ Q++
Sbjct: 803 TPTRELSIQVK 813
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/82 (40%), Positives = 53/82 (64%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
+++ + GFE PS +QQ +I IQG+ + AQ+G+GK A F IS+L ++ CQ
Sbjct: 14 LIKAIYKYGFEIPSPVQQYSIPKLIQGQSISVNAQTGSGKTAAFGISLLSLVNPQKSICQ 73
Query: 411 ALIMAPTRELAQQIQKVVIALG 476
A+I++PT+EL+ Q +V+ LG
Sbjct: 74 AVIISPTKELSNQTLEVINTLG 95
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L+GG N ++ +R LE G H++V TPGR+ DMI R + + I+ VLDEAD ML GF+
Sbjct: 417 LYGGNNTQDQMRDLERGCHLIVATPGRLEDMIGRGKVGLDNIRFLVLDEADRMLDMGFEP 476
Query: 683 QIHDVFK----MLSADVQVILLSAT 745
QI + + ++ + Q ++ SAT
Sbjct: 477 QIRRIVEESRMPVTGERQTLMFSAT 501
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMIT---RRALHANTIKLFVLDEADEMLSRG 673
++GG+N+ + L+ GV ++VGTPGR+ D++T + + N VLDEAD +L G
Sbjct: 676 VYGGSNIGAQLNVLKKGVEIIVGTPGRIIDILTISNSKVTNLNRASFIVLDEADRLLDLG 735
Query: 674 FKDQIHDVFKMLSADVQVILLSAT 745
F+ QIH + D Q ++SAT
Sbjct: 736 FESQIHSILNNCRKDKQTAMISAT 759
Score = 42.3 bits (95), Expect = 0.013
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI--DTSIRECQ---ALIM 422
F+K +IQ +AI + GRD+IA A++G+GK ++ +++ + +R +I+
Sbjct: 589 FKKMFSIQMQAIPALMCGRDIIAIAETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIIL 648
Query: 423 APTRELAQQIQ 455
PTREL+ Q++
Sbjct: 649 TPTRELSIQVK 659
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
CL+GG + R I +++ GV +++ TPGR+ D++ + +I VLDEAD ML GF+
Sbjct: 430 CLYGGGDRRTQINKVKGGVEIIIATPGRLNDLVAANVIDITSITYLVLDEADRMLDMGFE 489
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI + + D Q I+ SAT
Sbjct: 490 PQIRKLLLDIRPDRQTIMTSAT 511
Score = 52.4 bits (120), Expect = 1e-05
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQID-TSIREC 407
++E + GF KPS IQ +A ++G D+I AQ+GTGK F + I+ +
Sbjct: 334 LLEEIKKQGFAKPSPIQAQAWPVLLKGEDLIGIAQTGTGKTLAFLLPAFIHIEGQPVPRG 393
Query: 408 QA------LIMAPTRELAQQIQKVV 464
+A L+MAPTRELA QI+K V
Sbjct: 394 EARGGPNVLVMAPTRELALQIEKEV 418
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSRG 673
++GG+N+ + L+ GV ++VGTPGR+ D++T + + N + VLDEAD +L G
Sbjct: 776 VYGGSNIGTQLNTLKRGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLG 835
Query: 674 FKDQIHDVFKMLSADVQVILLSAT 745
F+ QIH++ D Q ++SAT
Sbjct: 836 FESQIHNILNNCRKDKQTAMISAT 859
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI--DTSIRECQ---A 413
R F+K IQ + I + GRDVIA A++G+GK ++ +++ + +R A
Sbjct: 686 RKQFKKMFGIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPLIRHVLHQPPLRNNDGPIA 745
Query: 414 LIMAPTRELAQQIQ 455
+I+ PTREL++Q++
Sbjct: 746 IILTPTRELSKQVK 759
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/104 (35%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +3
Query: 228 RIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI-DTSIRE 404
R+++ + GF+ P+ IQ +AI + GR+++A A +G+GK FSI IL Q+ + +
Sbjct: 174 RLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKG 233
Query: 405 CQALIMAPTRELAQQIQKVVIALGDHLNAKCHACMVAPMSVKIF 536
+ALI++PTRELA QI + +I + + + H A ++ K F
Sbjct: 234 FRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKF 277
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 71.3 bits (167), Expect = 2e-11
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG ++R + ++ GVH+VV TPGR+ DM+ ++ + + + LDEAD ++ GF+D I
Sbjct: 264 GGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDI 323
Query: 689 HDVFKMLSADVQVILLSAT 745
+VF + Q +L SAT
Sbjct: 324 REVFDHFKSQRQTLLFSAT 342
Score = 36.7 bits (81), Expect = 0.63
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATF-----SISILQQIDTSIRECQ--- 410
G +P+ IQ + + + GRD+I A +G+GK F I++ +++ I +
Sbjct: 165 GIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPI 224
Query: 411 ALIMAPTRELAQQIQKVV 464
LI+ P+RELA+Q +VV
Sbjct: 225 GLIVCPSRELARQTYEVV 242
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/104 (35%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +3
Query: 228 RIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI-DTSIRE 404
R+++ + GF+ P+ IQ +AI + GR+++A A +G+GK FSI IL Q+ + +
Sbjct: 175 RLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKG 234
Query: 405 CQALIMAPTRELAQQIQKVVIALGDHLNAKCHACMVAPMSVKIF 536
+ALI++PTRELA QI + +I + + + H A ++ K F
Sbjct: 235 FRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKF 278
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/88 (35%), Positives = 59/88 (67%)
Frame = +3
Query: 222 QRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIR 401
+R ++ +G+E PS+IQ+ +I + GRD++A+A++GTGK+ + I +L+++D
Sbjct: 90 KRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKD 148
Query: 402 ECQALIMAPTRELAQQIQKVVIALGDHL 485
QA+++ PTRELA Q+ ++ I + H+
Sbjct: 149 NIQAMVIVPTRELALQVSQICIQVSKHM 176
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/79 (39%), Positives = 51/79 (64%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGTN+R+D+ +L+ HVV+ TPGR+ D+I + + +++ VLDEAD++LS+ F +
Sbjct: 186 GGTNLRDDVMRLDDTGHVVIATPGRILDLIKKCLEKVDHVQMVVLDEADKLLSQDFVQIM 245
Query: 689 HDVFKMLSADVQVILLSAT 745
L + Q++L SAT
Sbjct: 246 EAFILTLPKNRQILLYSAT 264
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +3
Query: 225 RRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRE 404
+ ++E + G KP+ IQ + I ++ +DVI Q+ +G+GK + + I Q+IDTS RE
Sbjct: 12 QNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLPIFQKIDTSKRE 71
Query: 405 CQALIMAPTRELAQQIQKVV 464
QA+I+APT ELA QI K +
Sbjct: 72 MQAIILAPTHELAMQINKEI 91
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
G NV+ I +L+ HV+VG+ GR+ ++I ++ + A+TIK V+DE D++L I
Sbjct: 109 GNANVKRQIEKLKEKPHVIVGSSGRILELIKKKKISAHTIKTIVVDEGDKLLDHSNLSSI 168
Query: 689 HDVFKMLSADVQVILLSAT 745
DV K D Q+++ SAT
Sbjct: 169 KDVIKTTMRDRQLMVFSAT 187
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 70.9 bits (166), Expect = 3e-11
Identities = 30/69 (43%), Positives = 49/69 (71%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LG+ + +Q +++ P ++G DVIAQA +G+GK A F + +LQ++D ++ QAL++ PT
Sbjct: 44 LGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPT 103
Query: 432 RELAQQIQK 458
RELA Q+ K
Sbjct: 104 RELADQVGK 112
Score = 66.9 bits (156), Expect = 5e-10
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 503 LHGGTNVREDIRQLES-GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
L GG + + LE+ HVVVGTPGR+ ++ +RALH ++ VLDEAD ML GF+
Sbjct: 129 LTGGMPLGPQLASLEAHDPHVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFE 188
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
+ I ++ Q +L SAT
Sbjct: 189 EPIREIASRCDKHRQSLLFSAT 210
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+GF P+ IQ AI P ++ RDV+ AQ+GTGK A F + +L +D R QAL++APT
Sbjct: 63 MGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAAFGLPLLAIVDADERNVQALVLAPT 122
Query: 432 RELAQQIQKVV 464
RELA Q + +
Sbjct: 123 RELAMQSAQAI 133
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG+ I L+ G VVVGTPGRV D+I + AL + +++ VLDEADEML GF +
Sbjct: 148 VYGGSPYGPQIGALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAE 207
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + D L SAT
Sbjct: 208 DVETIASSAPDDRLTALFSAT 228
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
+G+ KPS IQ+ A+ IQ ++IAQ+QSGTGK A F++ +L +D SI QA+ ++P
Sbjct: 88 MGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLGMLNCVDPSINAPQAICISP 147
Query: 429 TRELAQQIQKVVIALGDHLNAK 494
T+ELA Q +V+ +G N K
Sbjct: 148 TKELALQTFEVISKIGQFSNIK 169
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/63 (34%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +2
Query: 560 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSADVQVILL 736
V++GTPG++ + + ++ L +K+ VLDEAD ++ + +QI + ++L ++V+V L
Sbjct: 187 VIIGTPGKILENVIKKQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVKVCLF 246
Query: 737 SAT 745
SAT
Sbjct: 247 SAT 249
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GGT R L +GVHV + TPGR+ D++ + + LDEAD ML GF+
Sbjct: 252 CVYGGTPKGPQQRALRAGVHVCIATPGRLIDLLETNCTNLLRVTYLTLDEADRMLDMGFE 311
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
DQI + + D Q ++ SAT
Sbjct: 312 DQIRKICSQIRTDRQTLMFSAT 333
Score = 44.0 bits (99), Expect = 0.004
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATF----SISILQQIDTSIRECQ-ALI 419
GF+KP+ IQ + + RD++ A++G+GK F ++ I+ Q + AL+
Sbjct: 164 GFQKPTPIQSVSWPVLLNSRDIVGVAKTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALV 223
Query: 420 MAPTRELAQQIQ 455
+APTRELA QI+
Sbjct: 224 LAPTRELAVQIE 235
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/82 (41%), Positives = 46/82 (56%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C+ GG +R LE GV VV+ TPGR+ D + R + VLDEAD ML GF+
Sbjct: 337 CIFGGALKGPQVRDLERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFE 396
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI + + + D QV++ SAT
Sbjct: 397 PQIRKIIEQIRPDRQVLMWSAT 418
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI--DTSIRECQ---A 413
++GF P+AIQ + + GRD++ AQ+G+GK + + + I ++ +
Sbjct: 246 KMGFPNPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYMLPGIVHIAHQKPLQRGEGPVV 305
Query: 414 LIMAPTRELAQQIQKVVIALGDH 482
L++APTRELAQQIQ VV G H
Sbjct: 306 LVLAPTRELAQQIQTVVRDFGTH 328
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ I QL GVHV+V TPGR+ D I R + I VLDEADEML+ GF D
Sbjct: 105 VYGGQSIGNQIAQLRRGVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFID 164
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + Q +L SAT
Sbjct: 165 DIERILSHVPERRQTMLFSAT 185
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+GFE + IQ + + G DV+ +AQ+GTGK A F+I +L+ ++ R QALI+ PT
Sbjct: 22 MGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLENLEAE-RVPQALIICPT 80
Query: 432 RELAQQIQKVVIALGDHLNAK 494
REL Q+ + + +G ++ K
Sbjct: 81 RELCLQVSEEIKRIGKYMKVK 101
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + R ++ LE H+VVGTPGR+ + + R + + I++ VLDEAD+ML GF D
Sbjct: 104 IYGGQDFRSQVKALEELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFID 163
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + K L Q +L SAT
Sbjct: 164 EAEKILKKLPERRQTLLFSAT 184
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/82 (39%), Positives = 54/82 (65%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
IV +GFE+ + IQ++AI ++G+D+I QA++GTGK A F I +++ I + + Q
Sbjct: 13 IVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEAIRPTSKGVQ 72
Query: 411 ALIMAPTRELAQQIQKVVIALG 476
L++ PTRELA Q+ + + +G
Sbjct: 73 GLVVVPTRELAVQVAEELTRIG 94
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/85 (43%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKNATFSISILQQID-TSIR 401
I++ + + F+KPS IQ RA+ + R++IAQ+QSGTGK F ++IL ++D
Sbjct: 107 IIDGLLAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPN 166
Query: 402 ECQALIMAPTRELAQQIQKVVIALG 476
+ QAL +AP+RELA+QIQ V+ ++G
Sbjct: 167 QPQALALAPSRELARQIQSVIQSIG 191
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +2
Query: 545 ESGV--HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSA 715
E+GV +VVVGTPG V D+I RR + +KL V+DEAD ML +G +Q V ML
Sbjct: 210 ETGVKANVVVGTPGTVMDLIRRRQFDVSQLKLLVVDEADNMLDQQGLGEQCVRVKNMLPK 269
Query: 716 DVQVILLSAT 745
+Q +L SAT
Sbjct: 270 TIQTLLFSAT 279
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 70.5 bits (165), Expect = 4e-11
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GG N +E I+ + GV +++ TPGR+ D+ + ++ +I VLDEAD+ML GF+
Sbjct: 411 CVYGGGNRKEQIQHITKGVDIIIATPGRLNDLQMNKCVNLRSITYLVLDEADKMLDLGFE 470
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI + + D Q ++ SAT
Sbjct: 471 GQITKILLDVRPDRQTVMTSAT 492
Score = 48.0 bits (109), Expect = 3e-04
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTS--IRECQ---- 410
+ GF++P+ IQ +A +QG D+I AQ+GTGK ++ I +D+ RE +
Sbjct: 322 KAGFQRPTPIQSQAWPIVLQGMDLIGVAQTGTGKTLSYLIPGFIHLDSQPISREERNGPG 381
Query: 411 ALIMAPTRELAQQIQ 455
L++ PTRELA Q++
Sbjct: 382 MLVLTPTRELALQVE 396
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 70.5 bits (165), Expect = 4e-11
Identities = 28/80 (35%), Positives = 50/80 (62%)
Frame = +2
Query: 506 HGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 685
+GG +V + +R+L+ +H+++GTPGR+ D + R+ ++ + + VLDEAD+ML GF
Sbjct: 106 YGGQDVEQQLRKLKGSIHIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRD 165
Query: 686 IHDVFKMLSADVQVILLSAT 745
+ D+ + Q + SAT
Sbjct: 166 VEDIMTHIPKRRQNMFFSAT 185
Score = 64.1 bits (149), Expect = 4e-09
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = +3
Query: 264 KPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTRELA 443
+P+ +Q +AI P + RDV+AQAQ+GTGK F + IL++++ QALI+ PTRELA
Sbjct: 25 EPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILERVNVEKPTIQALIITPTRELA 84
Query: 444 QQI 452
QI
Sbjct: 85 IQI 87
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/81 (39%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ IR L+ V +VVGTPGR+ D + R L IK V+DEADEML GF +
Sbjct: 105 VYGGVSIGNQIRALKRRVDLVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIE 164
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + + + Q+++ SAT
Sbjct: 165 DVEMILSKTNKEKQILMFSAT 185
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKNATFSISILQQIDTSIRECQALIMA 425
R G+E P+ IQ++ I + G++ VI QAQ+GTGK A F I +++++D + QAL++
Sbjct: 19 RKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIERLDEKANDVQALVLT 78
Query: 426 PTRELAQQI 452
PTRELA Q+
Sbjct: 79 PTRELALQV 87
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
CL+GG + R I + +GV +++ TPGR+ D++ + +TI +LDEAD ML GF+
Sbjct: 212 CLYGGGDRRAQINVVRNGVEILIATPGRLNDLVQEGVVDVSTITYLILDEADRMLDMGFE 271
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI V + D Q ++ SAT
Sbjct: 272 PQIRKVLLDVRPDRQTVMTSAT 293
Score = 45.6 bits (103), Expect = 0.001
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISIL-----QQIDTSIR-ECQALI 419
F P+ IQ +A ++G D+I AQ+GTGK F + L Q I R L+
Sbjct: 126 FTTPTPIQAQAWPILLRGEDLIGIAQTGTGKTLAFLLPALIHIEGQPIPRGERGGPNVLV 185
Query: 420 MAPTRELAQQIQKVV 464
+APTRELA QI+K V
Sbjct: 186 LAPTRELALQIEKEV 200
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GG + L GV VVVGTPGR+ D+I R+L ++ VLDEAD+ML+ GF+
Sbjct: 211 CVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFE 270
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
+ + + + L Q +L SAT
Sbjct: 271 EAVESILENLPTKRQSMLFSAT 292
Score = 60.5 bits (140), Expect = 4e-08
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Frame = +3
Query: 225 RRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQID----- 389
+R+ E + G IQ+ ++P +QGRD+IA+A++GTGK F I I++++
Sbjct: 111 QRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGD 170
Query: 390 -TSIREC----QALIMAPTRELAQQIQKVVIALGDHLNAKC 497
T+ R + L++APTRELA+Q++K + +L+ C
Sbjct: 171 YTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVC 211
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/79 (43%), Positives = 51/79 (64%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+G+E P+AIQ I + G DV+ AQ+GTGK A F+I +L +ID + + QAL++ PT
Sbjct: 31 VGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPT 90
Query: 432 RELAQQIQKVVIALGDHLN 488
RELA Q+ + G +L+
Sbjct: 91 RELALQVAEAFGRYGAYLS 109
Score = 66.5 bits (155), Expect = 7e-10
Identities = 33/81 (40%), Positives = 45/81 (55%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG++ + L G VVVGTPGR+ D + R L + + VLDEADEML+ GF D
Sbjct: 116 IYGGSSYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFAD 175
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + QV L SAT
Sbjct: 176 DVERILSETPEYKQVALFSAT 196
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
CL+GG +R LE G +VV TPGR+ D++ R + + + VLDEAD ML GF+
Sbjct: 336 CLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFE 395
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI + K + Q ++ +AT
Sbjct: 396 PQIRKIVKQVQPKRQTLMFTAT 417
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSIS---ILQQIDTSIRE-CQALIM 422
GF P+ IQ ++ ++ RD++A A++G+GK + I +L+++ + R+ L++
Sbjct: 250 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVL 309
Query: 423 APTRELAQQIQ 455
+PTRELA QIQ
Sbjct: 310 SPTRELATQIQ 320
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/79 (41%), Positives = 50/79 (63%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + R + R+L +G H+VVGTPGR+ D + R L + +K VLDEADEML+ GF++ +
Sbjct: 109 GGMDPRREQRELAAGAHIVVGTPGRLCDHLRRGRLDISELKAVVLDEADEMLNLGFREDM 168
Query: 689 HDVFKMLSADVQVILLSAT 745
+ + + +L SAT
Sbjct: 169 EFILETTPETRRTLLFSAT 187
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/90 (28%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ------ALI 419
+++P+ +Q + GRD++ AQ+G+GK + +++ + + I + ALI
Sbjct: 19 YDRPTPVQLAVLTEEAAGRDLLVSAQTGSGKTLAYGLALAKDLLDGIERFERAGAPLALI 78
Query: 420 MAPTRELAQQIQKVVIALGDHLNAKCHACM 509
+APTRELA Q+Q+ + L +H + + +C+
Sbjct: 79 VAPTRELALQVQRELAWLYEHADGRVVSCV 108
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG N+ I L++GV ++V TPGR+ D++ ++A++ + ++ VLDEAD ML GF I
Sbjct: 117 GGINIEPQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDI 176
Query: 689 HDVFKMLSADVQVILLSAT 745
V +LS Q ++ SAT
Sbjct: 177 KRVMALLSPQRQSLMFSAT 195
Score = 62.1 bits (144), Expect = 1e-08
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 8/85 (9%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI----DTSI----RECQ 410
G+ P+ IQ + I + G+DV+A AQ+GTGK A F++ +L ++ +TS+ +
Sbjct: 24 GYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVR 83
Query: 411 ALIMAPTRELAQQIQKVVIALGDHL 485
ALIMAPTRELA QI + V G +L
Sbjct: 84 ALIMAPTRELAMQIDESVRKYGKYL 108
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 70.1 bits (164), Expect = 5e-11
Identities = 31/78 (39%), Positives = 53/78 (67%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
++E+ + F P+ IQ +AI ++G+DV+ +AQ+GTGK A F + L +ID S+++ Q
Sbjct: 19 VLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALAKIDASVKQTQ 78
Query: 411 ALIMAPTRELAQQIQKVV 464
L++ PTRELA Q+ + +
Sbjct: 79 VLVVTPTRELAIQVAEAL 96
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/81 (39%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ L+ G +VVGTPGR+ D++ + L + +K+ VLDEADEML+ GF +
Sbjct: 111 VYGGAPFGPQVKALKQGTAIVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFIE 170
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + K + Q L SAT
Sbjct: 171 DIETILKAVPNTAQRALFSAT 191
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG++++ I L +++VGTPGR+ D I R+ L + IK VLDEADEML GFK +
Sbjct: 106 GGSHIQRQIYALRKS-NIIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKTDL 164
Query: 689 HDVFKMLSADVQVILLSAT 745
VF+ Q +L SAT
Sbjct: 165 DKVFQNAPNKYQTLLFSAT 183
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/79 (35%), Positives = 50/79 (63%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
++G+ + IQ++AI + +D+I ++ +GTGK F + ILQ ++T +++ QA+I+ P
Sbjct: 18 KMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQNLNTHLKQPQAIILCP 77
Query: 429 TRELAQQIQKVVIALGDHL 485
T ELA QI + V +L
Sbjct: 78 THELASQIIEQVRKFATYL 96
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/82 (40%), Positives = 47/82 (57%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C+ GG I + G+ ++V TPGR++D+I ++ + +K+ VLDEAD ML GF
Sbjct: 106 CITGGVEQEAQIAAADYGIDILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLDLGFI 165
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
I DV K L A Q + SAT
Sbjct: 166 KDIQDVKKFLPARHQTLFFSAT 187
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI----DTSIRECQALIM 422
GF +P+ IQ ++I P + G DV+A AQ+GTGK A F I +L + + + L+M
Sbjct: 20 GFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNTLINVKKSEHTDISCLVM 79
Query: 423 APTRELAQQIQKVVIALG 476
APTRELA QI +V +G
Sbjct: 80 APTRELAVQISEVFKKIG 97
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/84 (41%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI----DTSIRECQALIM 422
G+ +PSAIQ +AI ++G+DV+A AQ+GTGK A F++ +L+ + + + +AL++
Sbjct: 24 GYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLEILSKGENAQSNQVRALVL 83
Query: 423 APTRELAQQIQKVVIALGDHLNAK 494
PTRELA Q+ + V G HL+ K
Sbjct: 84 TPTRELAAQVAESVKNYGQHLSLK 107
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/79 (34%), Positives = 44/79 (55%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + + L G +++ TPGR+ D+ ++A+ + +++ VLDEAD ML GF I
Sbjct: 113 GGVKINPQMMALRRGADILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGFIHDI 172
Query: 689 HDVFKMLSADVQVILLSAT 745
+ +L Q +L SAT
Sbjct: 173 KKILAILPKKRQNLLFSAT 191
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/82 (40%), Positives = 45/82 (54%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C+ GG + R LE GV +V+ TPGR+ D + R VLDEAD ML GF+
Sbjct: 263 CIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFE 322
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI + + + D QV++ SAT
Sbjct: 323 PQIRKIMQQIRPDRQVLMWSAT 344
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ-----ALI 419
GF KP+AIQ + + GRD++ AQ+G+GK + + + I+ R + AL+
Sbjct: 176 GFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALV 235
Query: 420 MAPTRELAQQIQKVVIALGDHLNAK 494
+APTRELAQQIQ+V I G + + +
Sbjct: 236 LAPTRELAQQIQQVAIEFGSNTHVR 260
>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 70.1 bits (164), Expect = 5e-11
Identities = 28/79 (35%), Positives = 52/79 (65%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG ++ ++ + +GVH+V+GTPGR+ DM+ ++ ++ + + VLDEAD ML + F+ +I
Sbjct: 235 GGMDMSSQLQSIRNGVHIVIGTPGRISDMVNKKKINMDLCRFIVLDEADRMLDQVFELEI 294
Query: 689 HDVFKMLSADVQVILLSAT 745
++ + + Q +L SAT
Sbjct: 295 RNILEHFTGPRQTMLFSAT 313
Score = 39.5 bits (88), Expect = 0.089
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Frame = +3
Query: 228 RIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSI-SILQQIDTSIRE 404
RI++ ++ +KP+ IQ + + + GRD+I A SG GK F + ++LQ I+ ++
Sbjct: 127 RILKILSKMKIKKPTPIQMQGLPAVLMGRDIIGVAPSGQGKTLVFLLPALLQCIEEEMKM 186
Query: 405 CQ-------ALIMAPTRELA 443
ALI+ P+ ELA
Sbjct: 187 PVIRGEGPFALILLPSHELA 206
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LG P+A+Q+R I ++GRDV+ A++G+GK A F++ IL ++ AL +APT
Sbjct: 95 LGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPT 154
Query: 432 RELAQQIQKVVIALGDHLNAKCHACM 509
RELA Q+ + ALG L +C A +
Sbjct: 155 RELAAQLAEQFRALGAPLGLRCLAAI 180
Score = 43.6 bits (98), Expect = 0.005
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTI---KLFVLDEADEMLSRGFK 679
GG + + L HVVV TPGR+ +I A K VLDEAD +L F+
Sbjct: 181 GGFDSLGQAKGLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFE 240
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
+ + +F L Q L SAT
Sbjct: 241 EDLRVIFGSLPKKRQTFLFSAT 262
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMI---TRRALHANTIKLFVLDEADEMLSR 670
C GG+++ I +L+ G ++VGTPGR+ D++ + R + + VLDEAD M
Sbjct: 423 CCFGGSSIESQIAELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDM 482
Query: 671 GFKDQIHDVFKMLSADVQVILLSAT 745
GF+ Q+ VF + D Q +L SAT
Sbjct: 483 GFEPQVTKVFTRVRPDRQTVLFSAT 507
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTS--IRECQ---A 413
RL + PS+IQ +AI + GRD+I A++G+GK +F + +L+ I +R
Sbjct: 334 RLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIG 393
Query: 414 LIMAPTRELAQQIQKVVIALGDHLNAKCHAC 506
LIM PTRELA QI K + LN C
Sbjct: 394 LIMTPTRELALQIHKELNHFTKKLNISSCCC 424
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/81 (39%), Positives = 51/81 (62%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + I+ L++ ++VVGTPGR+ D I R L+ +K F+LDEADEML+ GF
Sbjct: 108 IYGGKAIYPQIKALKNA-NIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIK 166
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + + D +++L SAT
Sbjct: 167 DVEKILNACNKDKRILLFSAT 187
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/81 (35%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
GFEKP+ IQ + I + +++AQA++G+GK A+F+I +++ ++ + +A+I+ PT
Sbjct: 25 GFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNEN-NGIEAIILTPT 83
Query: 432 RELAQQIQKVVIALGDHLNAK 494
RELA Q+ + +L + N K
Sbjct: 84 RELAIQVADEIESLKGNKNLK 104
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG N E + L++GV +++ TPGR+ +MI ++A + V+DEAD+M S GF+
Sbjct: 169 LLGGENKHEQWKMLKAGVEILIATPGRLMEMIQKKATNLRRCTYVVIDEADKMFSMGFEK 228
Query: 683 QIHDVFKMLSADVQVILLSAT 745
QI + + + D Q +L +AT
Sbjct: 229 QIRSIMQQIRPDRQTLLFTAT 249
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPC-IQGRDVIAQAQSGTGKNATF----SISILQQIDTSIRECQ- 410
+LGFEKP+ IQ +A +PC + GRD++ A++G+GK ++ I IL Q + E
Sbjct: 79 KLGFEKPTQIQCQA-LPCGLSGRDIVGVAKTGSGKTVSYLWPLLIHILDQRELEKNEGPI 137
Query: 411 ALIMAPTRELAQQI 452
LI+APTREL QQ+
Sbjct: 138 GLILAPTRELCQQV 151
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/79 (39%), Positives = 51/79 (64%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG ++R +++L+ GV ++V TPGR+ D+I ++ + + +K+ VLDEAD ML GF I
Sbjct: 132 GGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDI 191
Query: 689 HDVFKMLSADVQVILLSAT 745
V + L + Q ++ SAT
Sbjct: 192 KKVIEYLPKNRQNMMFSAT 210
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIR----ECQALIM 422
G+ P+ IQ I +QG+D++A AQ+GTGK A F + I++ + + + +L++
Sbjct: 43 GYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVL 102
Query: 423 APTRELAQQIQKVVIALGDHLNAKCHA 503
PTRELA Q++ A +L + A
Sbjct: 103 TPTRELAAQVEASAKAYTKYLALRSDA 129
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + I L++G VV+GTPGR+ D I + A+T+++ VLDEADEMLS GF
Sbjct: 147 IYGGVGYQPQIDGLKNGAQVVIGTPGRILDHIKKDNFDASTLRMLVLDEADEMLSMGFYP 206
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ D+ + + D + SAT
Sbjct: 207 DMKDIVEHVPGDRVSYMYSAT 227
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
G+ + +Q++AI + GRD+I Q+Q+G+GK F + + ++ E Q LI+ PTR
Sbjct: 60 GWTELMDVQRKAIPYTLDGRDLIVQSQTGSGKTGAFLLPLFDLVNPDKEEQQVLILTPTR 119
Query: 435 ELAQQIQK 458
ELA+QI +
Sbjct: 120 ELARQIHE 127
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 69.7 bits (163), Expect = 7e-11
Identities = 32/84 (38%), Positives = 54/84 (64%)
Frame = +3
Query: 213 HEPQRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDT 392
H Q I E GF+KP+ +Q++A + G+DVIA++ +GTGK +++ +L++I
Sbjct: 9 HNAQSFIQENWNASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKP 68
Query: 393 SIRECQALIMAPTRELAQQIQKVV 464
+ QA+I+AP+REL QI +V+
Sbjct: 69 EQKHPQAVILAPSRELVMQIFQVI 92
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/81 (34%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG NV++ + +L+ H++VGTPGRV+++I + L + +K VLDE D+++ ++
Sbjct: 106 LIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAKKLKMHEVKTIVLDETDQLVLPEHRE 165
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + K D Q++ SAT
Sbjct: 166 TMKQIIKTTLRDRQLLCFSAT 186
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/79 (41%), Positives = 47/79 (59%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGT+ R I+ + SG VVV TPGR+ D + RR + + +++ VLDEAD M+ GF I
Sbjct: 132 GGTSERNQIQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLPAI 191
Query: 689 HDVFKMLSADVQVILLSAT 745
+ + L D Q + SAT
Sbjct: 192 KRILRALPRDKQTLCFSAT 210
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI-DTSIRECQALIMAPTR 434
F P+ +Q++AI P + GRD++A AQ+GTGK F I L+ + DT Q LI+ PTR
Sbjct: 47 FINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPTR 106
Query: 435 ELAQQIQKV 461
ELA Q+ V
Sbjct: 107 ELAMQVHGV 115
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG +R+ +R L GV ++V TPGR+ D++ ++ L + K VLDEAD+ML GF +
Sbjct: 212 GGAPIRKQMRDLSKGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAV 271
Query: 689 HDVFKMLSADVQVILLSAT 745
+ ++ D Q +L SAT
Sbjct: 272 KRIISKVNKDRQTLLFSAT 290
Score = 64.5 bits (150), Expect = 3e-09
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQ-----IDTSIRECQAL 416
LG+ P+ IQ +AI + +D++ AQ+GTGK A F++ ++QQ I R +A+
Sbjct: 121 LGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAI 180
Query: 417 IMAPTRELAQQIQKVVIALGDHLNAK-CHACMVAPM 521
I++PTRELA QI + ++ G L HA AP+
Sbjct: 181 ILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPI 216
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 69.7 bits (163), Expect = 7e-11
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIR--- 401
+VE LG+E+P+ IQ+ A+ P ++G+D++ A +GTGK A FS+ +LQ+I
Sbjct: 47 LVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQRITPGAHAPF 106
Query: 402 ECQALIMAPTRELAQQIQKVVIALGDHL 485
AL++ PTRELA Q+ + + G L
Sbjct: 107 TASALVLVPTRELAMQVAEAIHRYGQKL 134
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/81 (40%), Positives = 46/81 (56%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L+GG + + +R L+ GV VVV TPGR D + R+ L +++ VLDEADEML GF +
Sbjct: 141 LYGGQVISQQLRVLKRGVDVVVATPGRALDHLQRKTLKLEQVRVVVLDEADEMLDMGFAE 200
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + Q L SAT
Sbjct: 201 DLEAILSSTPEKRQTALFSAT 221
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 69.7 bits (163), Expect = 7e-11
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +3
Query: 246 IRLGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKNATFSISILQQIDTSIRECQALIM 422
I LGFE P+ +Q++AI ++ D++A AQ+GTGK A F ++Q+ID + R QALI+
Sbjct: 18 IDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQKIDANNRNTQALIL 77
Query: 423 APTRELAQQI 452
+PTREL QI
Sbjct: 78 SPTRELCLQI 87
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ E R ++ G ++V TPGR+ DMI RR + + I +LDEADEML+ GF +
Sbjct: 106 VYGGASITEQARDIKRGAQIIVATPGRMQDMINRRLVDISQINYCILDEADEMLNMGFYE 165
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I ++ + L SAT
Sbjct: 166 DIVNILSTTPDEKNTWLFSAT 186
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 69.3 bits (162), Expect = 1e-10
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +3
Query: 225 RRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRE 404
R ++E GFE+PS +Q +AI G D+I QA+SGTGK FS L +
Sbjct: 72 RPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYS 131
Query: 405 CQALIMAPTRELAQQIQKVVIALGDHLNA-KCH 500
Q LI+APTRE+A QI V+ A+G + +CH
Sbjct: 132 TQILILAPTREIAVQIHSVITAIGIKMEGLECH 164
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQ 685
GGT + +D +L+ H+ VG+PGR+ +I L+ +I+LF+LDEAD++L G F++Q
Sbjct: 168 GGTPLSQDKTRLKK-CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQ 226
Query: 686 IHDVFKMLSADVQVILLSAT 745
I+ ++ L A Q++ +SAT
Sbjct: 227 INWIYSSLPASKQMLAVSAT 246
>UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2;
Bacillaceae|Rep: ATP-dependent RNA helicase -
Oceanobacillus iheyensis
Length = 432
Score = 69.3 bits (162), Expect = 1e-10
Identities = 32/81 (39%), Positives = 52/81 (64%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GGT+ ++ +L++ H++VGTPGR+ D++ AL T K FV+DEAD ML GF +
Sbjct: 107 LVGGTDKQKMTEKLKTPPHIIVGTPGRILDLVKSGALSIYTAKSFVVDEADLMLDLGFIE 166
Query: 683 QIHDVFKMLSADVQVILLSAT 745
++ + D+Q+++ SAT
Sbjct: 167 EVDQLLVRSKQDIQLLVFSAT 187
Score = 56.4 bits (130), Expect = 7e-07
Identities = 25/68 (36%), Positives = 44/68 (64%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
+L F+ P+ IQ++ I I+G V+ Q+++G+GK F + + +++ +E Q +I AP
Sbjct: 18 QLKFKNPTEIQEKVIPAIIKGDSVVGQSRTGSGKTHAFLLPLFHGLESDKKEVQFVITAP 77
Query: 429 TRELAQQI 452
TRELA Q+
Sbjct: 78 TRELATQL 85
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 69.3 bits (162), Expect = 1e-10
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + + R LE+ H+++ TPGR D + R + + +K+ LDEADEML GF++
Sbjct: 106 VYGGESYTKQFRALEAKPHLIIATPGRAIDHLERGKIDLSALKILTLDEADEMLKMGFQE 165
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + K + + Q +L SAT
Sbjct: 166 ALETILKKIPEERQTVLFSAT 186
Score = 63.3 bits (147), Expect = 6e-09
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
L F + IQ I I+G DVI QAQ+GTGK F I I+++I+ I++ Q+LI+ PT
Sbjct: 21 LNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSLILCPT 80
Query: 432 RELAQQI 452
REL Q+
Sbjct: 81 RELTLQV 87
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 69.3 bits (162), Expect = 1e-10
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG I L++GV VVVGTPGR+ D+ R+ L + +++ VLDEADEML GF
Sbjct: 165 VYGGVGYESQIDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLP 224
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ ++ A Q +L SAT
Sbjct: 225 DVENLIGRTPASRQTMLFSAT 245
Score = 53.2 bits (122), Expect = 7e-06
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQID----------TSIR 401
+G P IQ +I ++G D+I QA++GTGK F I+IL +I T+
Sbjct: 71 VGIVSPFPIQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGDEGWEELTTKG 130
Query: 402 ECQALIMAPTRELAQQIQK 458
+ QAL+M PTRELA Q+ K
Sbjct: 131 KPQALVMCPTRELALQVSK 149
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 69.3 bits (162), Expect = 1e-10
Identities = 35/81 (43%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG R LE G HV+VGTPGRV D + +R + + + VLDEAD ML GF+D
Sbjct: 124 LCGGEPSRIQTNSLEHGAHVLVGTPGRVLDHLEQRNVDLSMLTTLVLDEADRMLEMGFQD 183
Query: 683 QIHDVFKMLSADVQVILLSAT 745
++ + K + Q +L SAT
Sbjct: 184 SLNAIVKHIPKTRQTLLFSAT 204
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
++ R +G+++ + +Q ++ + D + +A +G+GK F++++L +++ Q
Sbjct: 32 LLTRLDEIGYQQMTPVQSLSLPVILNNTDAVVRADTGSGKTTAFALTLLAKLEAKSFSPQ 91
Query: 411 ALIMAPTRELAQQIQKVVIALG-DHLNAK 494
AL++ PTRELA Q+ V L LN K
Sbjct: 92 ALVLCPTRELAHQVADEVRKLAKSMLNIK 120
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 69.3 bits (162), Expect = 1e-10
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++G N+ + + L GV +V GTPGRV+D I+ L I+ VLDEAD ML GF D
Sbjct: 105 IYGQHNINLETQILNKGVSIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDMGFLD 164
Query: 683 QIHDVFKMLSADVQVILLSAT 745
Q+ + K L + +L SAT
Sbjct: 165 QVVRIVKTLPKERITLLFSAT 185
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+GF+ P+ +Q +AI + D+I +++G+GK A F +SILQ + Q LI+ P
Sbjct: 21 MGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQLTNPEEAGPQGLILTPA 80
Query: 432 RELAQQIQKVVIALGDHLNAKCHA 503
RELA Q+ + + +L K A
Sbjct: 81 RELAVQVDNDIRKMAKYLKHKTTA 104
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/78 (42%), Positives = 55/78 (70%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LG+++P+ IQ AI + G+D+I A++G+GK A F+I ILQ++ + +LI+APT
Sbjct: 59 LGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPT 118
Query: 432 RELAQQIQKVVIALGDHL 485
REL+ QI++ +I+LG +
Sbjct: 119 RELSLQIKEQLISLGSEI 136
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQ 685
GG ++ QL H++VG+PGR+ D + + TIK VLDEAD++LS F D
Sbjct: 145 GGLDMVSQALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDS 204
Query: 686 IHDVFKMLSADVQVILLSAT 745
++ + L D L SAT
Sbjct: 205 LNKIITSLPKDKVTYLYSAT 224
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GGT+V R+LE G HVVVGTPGR+ D I + ++ + +K +LDEAD ML GF+
Sbjct: 383 VYGGTSVGYQARELEKGAHVVVGTPGRLLDFIGKGKINLSKVKYLILDEADRMLDMGFEP 442
Query: 683 QIHDV---FKM-LSADVQVILLSATNA 751
+I + F M Q ++ SAT A
Sbjct: 443 EIRKLVTTFDMPEKGQRQTLMFSATFA 469
Score = 39.5 bits (88), Expect = 0.089
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 11/76 (14%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQ-IDTSIRE---------- 404
+++P+ IQ+ AI + G+D++ AQ+G+GK A F + +L I + E
Sbjct: 290 YDRPTPIQKWAIPIVLSGKDLMGCAQTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQY 349
Query: 405 CQALIMAPTRELAQQI 452
A+I+ PTREL QI
Sbjct: 350 PAAIIVGPTRELVNQI 365
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/82 (40%), Positives = 47/82 (57%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
CL+GG +R L+ GV VVV TPGR+ D++ R + + VLDEAD ML GF+
Sbjct: 255 CLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFE 314
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI + K + Q ++ +AT
Sbjct: 315 PQIRKIVKEIPPRRQTLMYTAT 336
Score = 44.0 bits (99), Expect = 0.004
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATF---SISILQQIDTSIRE-CQAL 416
R GF P+ IQ ++ +Q +DV+A A++G+GK + ++++ + R L
Sbjct: 167 RAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVL 226
Query: 417 IMAPTRELAQQIQKVVIALG 476
++APTRELA QI + + G
Sbjct: 227 VLAPTRELATQILEEAVKFG 246
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 69.3 bits (162), Expect = 1e-10
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +3
Query: 225 RRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRE 404
R ++E GFE+PS +Q +AI G D+I QA+SGTGK FS L +
Sbjct: 71 RPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLS 130
Query: 405 CQALIMAPTRELAQQIQKVVIALGDHLNA-KCH 500
Q LI+APTRE+A QI V+ A+G + +CH
Sbjct: 131 TQILILAPTREIAVQIHSVITAIGIKMEGLECH 163
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQ 685
GGT + +D +L+ H+ VG+PGR+ +I L+ +I+LF+LDEAD++L G F++Q
Sbjct: 167 GGTPLSQDKTRLKK-CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQ 225
Query: 686 IHDVFKMLSADVQVILLSAT 745
I+ ++ L A Q++ +SAT
Sbjct: 226 INWIYSSLPASKQMLAVSAT 245
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG +V + +R+L+ H+VV TPGR+ D I R + + + VLDEAD+ML GF
Sbjct: 108 IYGGQDVAQQLRKLKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLY 167
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I D+ Q +L SAT
Sbjct: 168 DIEDILDETPGSKQTMLFSAT 188
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
G + + IQ++AI + G+D+I QA++GTGK F + IL++ID + QALI+APTR
Sbjct: 24 GITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTR 83
Query: 435 ELAQQI 452
ELA QI
Sbjct: 84 ELALQI 89
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 68.9 bits (161), Expect = 1e-10
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ-----ALI 419
G+E P+ IQ AI ++G D++ AQ+GTGK A FS+ ILQ + R+ + LI
Sbjct: 23 GYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLI 82
Query: 420 MAPTRELAQQIQKVVIALGDHLNAKCHA 503
+ PTRELA QI + + A HLN K HA
Sbjct: 83 LTPTRELAIQIHENIEAYSKHLNMK-HA 109
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
+ GG +R L+ GV +++ TPGR+ D+ ++ L + +++FVLDEAD ML GF
Sbjct: 111 IFGGVGQNPQVRALQGGVDILIATPGRLMDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQ 170
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + +L + SAT
Sbjct: 171 DIKKILPLLPQKRHNLFFSAT 191
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/79 (40%), Positives = 49/79 (62%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + +R L+ G ++V TPGR+ D+I +RAL +++FVLDEAD+ML GF +
Sbjct: 115 GGVPIGRQMRMLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHAL 174
Query: 689 HDVFKMLSADVQVILLSAT 745
+ K+L + Q + SAT
Sbjct: 175 RRIDKLLPKNRQTLFFSAT 193
Score = 62.9 bits (146), Expect = 8e-09
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTS-----IRECQAL 416
LG+ KP+ IQ +AI ++G+D+ AQ+GTGK A F++ + + T+ R C+ L
Sbjct: 24 LGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRML 83
Query: 417 IMAPTRELAQQIQKVVIALGDHLNAKCHA 503
I++PTRELA QI + HL +A
Sbjct: 84 ILSPTRELASQIARACNDYTRHLRMSVNA 112
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ +L G VVV TPGR++D+I R A+ + + VLDEADEML GF+D
Sbjct: 106 VYGGASIVSQTEELRKGAQVVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMGFQD 165
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+++ + + +L SAT
Sbjct: 166 ELNAILAVTPDSKNTLLFSAT 186
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGR--DVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMA 425
LGF + +Q++ I+P + R D++ AQ+GTGK A F I ++Q DT ++ QAL++
Sbjct: 20 LGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGIPLIQLTDTRLKRTQALVLC 78
Query: 426 PTRELAQQI 452
PTREL Q+
Sbjct: 79 PTRELCVQV 87
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
R+GF P+ IQ+ AI ++G+D+IA++ +GTGK + I IL +ID + QA+I+AP
Sbjct: 27 RVGFTAPTPIQEEAIPLILEGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAP 86
Query: 429 TRELAQQIQKVV 464
+ ELA QI + +
Sbjct: 87 SHELAMQIHQTI 98
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/81 (25%), Positives = 43/81 (53%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG N++ I L+ ++V T GR+ ++I + + + +K V+DE D +++ +
Sbjct: 112 LIGGANIKRQIENLKKRPQIIVATTGRLLEVIKLKKIKMHEVKTIVVDEFDILIAEEHAE 171
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + K + Q++ SAT
Sbjct: 172 NLKHIIKTTLKERQIVCFSAT 192
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
G++KP+ IQ +++ +QG+D + +A++GTGK A F+I LQ + ++ Q LI+ P R
Sbjct: 24 GYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQHLRAEVQHPQVLILTPGR 83
Query: 435 ELAQQIQKVVIALGDHL 485
EL +QI + I LG L
Sbjct: 84 ELCKQISQEFIKLGKGL 100
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/65 (38%), Positives = 39/65 (60%)
Frame = +2
Query: 551 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 730
G V+ TPGR+ D+ + L++N I + V+DEAD + GF++ + + K L VQ +
Sbjct: 123 GAQVISATPGRLIDIKEQGLLNSNCINMLVIDEADRLFDMGFREAVTSILKDLPKSVQTV 182
Query: 731 LLSAT 745
L SAT
Sbjct: 183 LCSAT 187
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/81 (40%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG N+ + IR+L SGV VVV PGR+ D I R + ++ ++DEAD M GF+
Sbjct: 104 IYGGVNMDQQIRRLRSGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQP 163
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + K L Q +L SAT
Sbjct: 164 DIQSILKCLVQPHQTLLFSAT 184
Score = 66.1 bits (154), Expect = 9e-10
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQ-IDTSIRECQALIMAPT 431
G+++P+ IQ +AI P + G DVI AQ+GTGK A +++ I+Q+ + T + L++APT
Sbjct: 20 GYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQKMLSTPRGRVRTLVIAPT 79
Query: 432 RELAQQIQKVVIALGDHLNAKCHACMV 512
RELA QI +LG A+ C +
Sbjct: 80 RELACQISDSFRSLGQ--RARIRECSI 104
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/74 (41%), Positives = 50/74 (67%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
++E +G+E PS IQ ++I + G ++ AQ+GTGK A F++ +L +ID ++ E Q
Sbjct: 35 VLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLSRIDANVAEPQ 94
Query: 411 ALIMAPTRELAQQI 452
L++APTRELA Q+
Sbjct: 95 ILVLAPTRELAIQV 108
Score = 65.3 bits (152), Expect = 2e-09
Identities = 33/81 (40%), Positives = 45/81 (55%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + IR L+ G V+VGTPGR+ D + + L + +K VLDEADEML GF D
Sbjct: 127 IYGGQDFSPQIRGLKRGAQVIVGTPGRMLDHLRKGTLKLDGLKALVLDEADEMLRMGFID 186
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + Q L SAT
Sbjct: 187 DVEAILAKTPDTCQRALFSAT 207
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 68.9 bits (161), Expect = 1e-10
Identities = 28/81 (34%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + +R+L++G ++V TPGR+ + ++ + N + FV+DEAD ML GF+
Sbjct: 425 IYGGASKFAQVRELQNGAEIMVATPGRLLEFLSNGTIKLNRVSYFVMDEADRMLDMGFEP 484
Query: 683 QIHDVFKMLSADVQVILLSAT 745
QI + + D Q ++ SAT
Sbjct: 485 QIRKIVGQIRPDRQTLMFSAT 505
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATF----SISILQQIDTSIRECQALIMA 425
F +P+ IQ+ C+ GRD+I +Q+G+GK TF + +L Q LI++
Sbjct: 339 FTEPTPIQKVGWTSCLTGRDIIGVSQTGSGKTLTFLLPGLLHLLAQPPVGTGGPIMLILS 398
Query: 426 PTRELAQQI 452
PTREL QI
Sbjct: 399 PTRELCLQI 407
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG N ++L +GV +++ TPGR+ +M+ ++A + VLDEAD+M S GF+
Sbjct: 295 LLGGENKHHQWKELRAGVDIIIATPGRLIEMVKKKATNLQRCTYIVLDEADQMFSLGFEY 354
Query: 683 QIHDVFKMLSADVQVILLSAT 745
QI + + D Q++L +AT
Sbjct: 355 QIRSIIGQIRPDKQILLFTAT 375
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/82 (34%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Frame = +3
Query: 225 RRIVERHIRLGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKNATFSISILQQIDT--S 395
+++V + + FEKP+AIQ +A +PC+ GR+VI A++G+GK + +L + +
Sbjct: 197 QKLVNKIVAQNFEKPTAIQSQA-LPCVLSGRNVIGVAKTGSGKTIAYVWPMLVHVSAQRA 255
Query: 396 IRECQ---ALIMAPTRELAQQI 452
+ + + L++ PTREL QQ+
Sbjct: 256 VEKKEGPIGLVVVPTRELGQQV 277
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/77 (46%), Positives = 45/77 (58%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFE PS +Q I I G DVI QA+SG GK A F +S LQQI+ S + AL++ TR
Sbjct: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTR 124
Query: 435 ELAQQIQKVVIALGDHL 485
ELA QI + +L
Sbjct: 125 ELAYQICNEFVRFSTYL 141
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +2
Query: 506 HGGTNVR--EDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGF 676
+GG N++ +D+ + E H+VVGTPGRV + + L ++ F+LDE D+ML S
Sbjct: 150 YGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDM 208
Query: 677 KDQIHDVFKMLSADVQVILLSAT 745
+ + ++FKM D QV++ SAT
Sbjct: 209 RRDVQEIFKMTPHDKQVMMFSAT 231
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GG N E I +L+ GV +++ TPGR+ D+ ++ I VLDEAD+ML GF+
Sbjct: 348 CVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFE 407
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI + + D Q ++ SAT
Sbjct: 408 PQIMKILLDVRPDRQTVMTSAT 429
Score = 46.0 bits (104), Expect = 0.001
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSIS-----ILQ-QIDT 392
++E + GF+KP+ IQ +A +QG D+I AQ+GTGK + + +LQ +
Sbjct: 253 VMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKG 312
Query: 393 SIRECQALIMAPTRELAQQIQ 455
L++ PTRELA Q++
Sbjct: 313 QRNRPGMLVLTPTRELALQVE 333
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/78 (44%), Positives = 52/78 (66%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GF+KPS IQ +AI G D+I +++SGTGK FS L+ ++T+ Q LI+ PTR
Sbjct: 43 GFKKPSPIQFKAIPLGRCGFDLIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTR 102
Query: 435 ELAQQIQKVVIALGDHLN 488
E+A QI+ V+ ++G H+N
Sbjct: 103 EIAVQIEDVLRSVGCHVN 120
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + +D+++ S H+ VG PGRV ++ AL N +KLFVLDEAD+++ F+ I
Sbjct: 129 GGRPLEDDLKK-SSKCHIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLMEESFQSDI 187
Query: 689 HDVFKMLSADVQVILLSAT 745
++++ L Q+I+ SAT
Sbjct: 188 NEIYNSLPPRKQMIVSSAT 206
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
CL GGT+ + I +L+ H+VVGTPGR+ D++ +AL + ++DEAD ML GF
Sbjct: 109 CLIGGTDKQRSIEKLKKQPHIVVGTPGRIKDLVEEQALFVHKANTIIVDEADLMLDMGFI 168
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
+ + + ++Q+++ SAT
Sbjct: 169 HDVDKIAARMPKNLQMLVFSAT 190
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
L F +P+ IQQ+ +G VI Q+Q+G+GK + + L +I+ E Q +I APT
Sbjct: 22 LRFTEPTGIQQKIFPVVKKGVSVIGQSQTGSGKTHAYLLPTLNRINPGREEVQLVITAPT 81
Query: 432 RELAQQIQKVVIAL 473
RELAQQI + ++ L
Sbjct: 82 RELAQQIYEEIVKL 95
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GGT++ + + L GV ++VGTPGRV DM R + N+ K+ LDEAD ML GF
Sbjct: 106 VYGGTDLEKQAKTLAKGVDIIVGTPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGFFP 165
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + +++ Q +L SAT
Sbjct: 166 DIMWIVERMTSRQQTLLFSAT 186
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
+LG+E + +Q+ + QG DVI QA++G+GK A F + IL++ S + QAL++AP
Sbjct: 22 QLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILERCQPS-GKLQALVLAP 80
Query: 429 TRELAQQI 452
TRELA Q+
Sbjct: 81 TRELANQV 88
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/75 (40%), Positives = 51/75 (68%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
L FE P+ +QQ+ I ++ +D+I ++Q+G+GK A F+I I Q +D + QAL++ PT
Sbjct: 22 LNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPICQLVDWDENKPQALVLVPT 81
Query: 432 RELAQQIQKVVIALG 476
RELA Q+++ + +G
Sbjct: 82 RELAIQVKEDMFNIG 96
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +2
Query: 536 RQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 715
++L+ HVVVGTPGR+ D + + + IK V+DEADEM + GF DQI + K LS
Sbjct: 117 KELKQKTHVVVGTPGRIIDHMEKGTFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDLSK 176
Query: 716 DVQVILLSAT 745
+LLSAT
Sbjct: 177 KRVTMLLSAT 186
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/81 (39%), Positives = 46/81 (56%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L+GG +R L G H+++GTPGR+ D + + L +IK VLDEAD ML GF +
Sbjct: 106 LYGGVPLRAQADSLAKGAHILIGTPGRIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYE 165
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+I + + Q +L SAT
Sbjct: 166 EIIKIGSNMPKQKQTLLFSAT 186
Score = 62.9 bits (146), Expect = 8e-09
Identities = 26/67 (38%), Positives = 45/67 (67%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LGF + IQQ++I P ++G+D++AQ+++G+GK F I + D + Q +++ PT
Sbjct: 21 LGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVKSNKPQTIVITPT 80
Query: 432 RELAQQI 452
RELA+Q+
Sbjct: 81 RELAEQV 87
>UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein;
n=10; Alphaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9)
Length = 793
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/79 (40%), Positives = 49/79 (62%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + R + R L+ G H+VVGTPGR+ D I R +L + ++ VLDEADEML GF++ +
Sbjct: 125 GGMDYRTERRALDRGAHIVVGTPGRLRDHIERGSLDLSGLRAVVLDEADEMLDLGFREDL 184
Query: 689 HDVFKMLSADVQVILLSAT 745
+ + + ++ SAT
Sbjct: 185 EFILGSAPEERRTLMFSAT 203
Score = 47.2 bits (107), Expect = 4e-04
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI----------DTSIRE 404
G+E + +Q+ + + GRD + AQ+G+GK F I+I QI DT I
Sbjct: 34 GYESLTPVQEAVLAEGVAGRDALVSAQTGSGKTVAFGIAIADQILQGADRLLFADTPI-- 91
Query: 405 CQALIMAPTRELAQQIQKVVIALGDHLNAKCHACM 509
AL +APTRELA Q+ + + L A C+
Sbjct: 92 --ALAIAPTRELALQVARELGWLYGEAGAHIATCV 124
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 68.5 bits (160), Expect = 2e-10
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKNATFSISILQQID-TSIRECQALIMAP 428
GF +P+ IQ++ I PCI G+DV+A +++G+GK A F I +LQ++ +AL+++P
Sbjct: 43 GFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSP 101
Query: 429 TRELAQQIQKVVIALGDHLNAKCHACMV 512
TRELA Q KVV LG +C AC+V
Sbjct: 102 TRELALQTFKVVKELGRFTGLRC-ACLV 128
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/82 (31%), Positives = 42/82 (51%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
CL GG + E + +++ TPGR+ +I L + ++ V DEAD + GF+
Sbjct: 126 CLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQ 185
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
DQ+ + K + Q +L SAT
Sbjct: 186 DQLTETLKRIPESRQTLLFSAT 207
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L+GG N E +R+L+ G H++V TPGR+ D+I R + ++ VLDEAD ML GF+
Sbjct: 384 LYGGNNTSEQMRELDRGCHLIVATPGRLDDIINRGKIGLENLRFLVLDEADRMLDMGFEP 443
Query: 683 QIHDVFK 703
QI + +
Sbjct: 444 QIRHIIE 450
Score = 47.2 bits (107), Expect = 4e-04
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 16/90 (17%)
Frame = +3
Query: 231 IVERHIRLG-FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI------- 386
I+ +I++ ++KP+ +Q+ AI + GRD+++ AQ+G+GK A F + IL ++
Sbjct: 277 IIRTNIKMARYDKPTPVQKYAIPIILSGRDLMSCAQTGSGKTAAFLVPILNRMLEQGASM 336
Query: 387 -DTSIRECQ-------ALIMAPTRELAQQI 452
S R Q L++APTRELA QI
Sbjct: 337 NPASNRPYQRRKQYPLGLVLAPTRELATQI 366
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/71 (52%), Positives = 47/71 (66%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+GFEK IQ+ AI + GRDV+ QA +GTGK +SIS+LQ+I Q LI+APT
Sbjct: 20 MGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQEIKEG-GGIQGLIVAPT 78
Query: 432 RELAQQIQKVV 464
RELA QI + V
Sbjct: 79 RELAVQITEEV 89
Score = 56.0 bits (129), Expect = 1e-06
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG ++ + L+ G ++V TPGR+ D I R ++ + + VLDEAD ML GF D
Sbjct: 103 IYGGQSMGVQLDALKRGAEILVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLDMGFID 162
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + + + L SAT
Sbjct: 163 DIQFILDLTPDEKVMSLFSAT 183
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GG++ I + SGV +V+GTPGR+ D+I L + + VLDEAD ML GF+
Sbjct: 224 CVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFE 283
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
+ + + + Q+++ SAT
Sbjct: 284 EPVRFILSNTNKVRQMVMFSAT 305
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIREC---------Q 410
FEKPS IQ + GRD+I A++G+GK F I + + ++
Sbjct: 134 FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPT 193
Query: 411 ALIMAPTRELAQQIQKVVIALGDHLNAK 494
L+++PTRELA QI V+ G+ K
Sbjct: 194 CLVLSPTRELAVQISDVLREAGEPCGLK 221
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSR 670
C +GG +RE I +L+ G ++V TPGR+ D++ R + + VLDEAD M
Sbjct: 703 CAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDM 762
Query: 671 GFKDQIHDVFKMLSADVQVILLSAT 745
GF+ Q+ +F + D Q IL SAT
Sbjct: 763 GFEPQVMKIFANMRPDRQTILFSAT 787
Score = 56.8 bits (131), Expect = 5e-07
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI--DTSIRECQ---AL 416
LG+EKP+ IQ +A+ + GRDVI A++G+GK F + + + I +++ L
Sbjct: 615 LGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGL 674
Query: 417 IMAPTRELAQQIQK 458
IM PTRELA QI K
Sbjct: 675 IMTPTRELAVQIHK 688
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/79 (43%), Positives = 52/79 (65%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGT D ++L+ H+ VGTPGR+ +I L TI+LFVLDEAD++L F++Q+
Sbjct: 71 GGTLFGPDRQKLKK-CHIAVGTPGRIKQLIEYEVLKTGTIRLFVLDEADKLLDDTFQEQV 129
Query: 689 HDVFKMLSADVQVILLSAT 745
+ ++ LS + Q++ LSAT
Sbjct: 130 NWIYNHLSDNKQMLALSAT 148
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 312 RDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTRELAQQIQKVVIALG 476
+D+I QA+SGTGK FS+ L+ ID + Q LI+APTRE+A QIQ + A+G
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIG 58
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
+GF P+ IQ++A+ + G D I A +GTGK A F I +++ ID+++++ QAL+++P
Sbjct: 62 MGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIPLIENIDSTVKDTQALVLSP 121
Query: 429 TRELAQQIQKVVIALG 476
TRELA Q+ + + LG
Sbjct: 122 TRELALQVAEQLTLLG 137
Score = 67.3 bits (157), Expect = 4e-10
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + R I ++ G H+VV TPGR+ D + ++ + ++K VLDEADEMLS GFK+
Sbjct: 147 IYGGASYRTQIDGIKRGAHIVVATPGRLVDFLEQKMIKLQSVKTVVLDEADEMLSMGFKE 206
Query: 683 QIHDVFKMLSAD 718
+ + D
Sbjct: 207 ALETILSATQPD 218
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/81 (41%), Positives = 46/81 (56%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG I L+ GV V+V TPGR+ D I + +++++ VLDEAD ML GF D
Sbjct: 150 LVGGAPYNGQITALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFAD 209
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I D+ + D Q I+ SAT
Sbjct: 210 DISDILRAAPIDRQTIMCSAT 230
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQID--TSI-RECQALI 419
R G+ P+ IQ AI +QGRD++ AQ+G+GK A F I +L ++ TS + +ALI
Sbjct: 61 RSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALI 120
Query: 420 MAPTRELAQQIQKVV 464
+ PTRELAQQ+ V
Sbjct: 121 LTPTRELAQQVHDSV 135
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG R ++ + G H+VVGTPGR+ + + +L + ++ VLDEAD ML GF+D
Sbjct: 107 LGGGMPFRPQMKSVAHGAHIVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQD 166
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+I + + Q +L SAT
Sbjct: 167 EIDAIIDQTNKQRQTLLFSAT 187
Score = 66.5 bits (155), Expect = 7e-10
Identities = 28/78 (35%), Positives = 50/78 (64%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
+++ LG+E+ + IQ+ ++ + G+D+IAQA++GTGK A F + +L ++ Q
Sbjct: 15 LIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSKLVLDDYRIQ 74
Query: 411 ALIMAPTRELAQQIQKVV 464
LI+ PTREL +Q+ K +
Sbjct: 75 VLILCPTRELCEQVSKAI 92
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/81 (39%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + ++L GV ++V TPGR+ DM T+RA+ + + + VLDEAD ML GF +
Sbjct: 107 MYGGVDAAPQKKRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIE 166
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I+ + + L Q +L SAT
Sbjct: 167 DINSIIEKLPEQRQNLLFSAT 187
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTS--IR- 401
+V+ LG+ P+ IQ +AI + G++V+A AQ+GTGK A+F + +L + + IR
Sbjct: 12 LVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHRFADAPKIRP 71
Query: 402 -ECQALIMAPTRELAQQIQK 458
+A+I+ PTRELA Q+++
Sbjct: 72 KRVRAIILTPTRELALQVEE 91
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +3
Query: 222 QRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQID--TS 395
+ +++ I GFE PS +Q AI P ++ +DVI QA+SG GK A F +S+L ID +
Sbjct: 136 REEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHMIDPQAA 195
Query: 396 IRECQALIMAPTRELAQQIQK 458
+ QAL++ T ELA QI K
Sbjct: 196 PHKVQALVLCNTHELAMQIYK 216
Score = 49.2 bits (112), Expect = 1e-04
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLES-GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR-- 670
C GG V +R L+S V + VGT GRV D++ R AL + IK VLDE D +
Sbjct: 234 CAIGGVTVSLHVRALKSKDVSIAVGTIGRVSDLVERGALDLSFIKYLVLDEFDALFKEED 293
Query: 671 GFKDQIHDVFKMLSADVQVILLSAT 745
FK +I + + A Q +L +AT
Sbjct: 294 NFK-KIAGLISKMPATHQTLLFTAT 317
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C+ GG IR LE G +V+ TPGR+ D + R + VLDEAD ML GF+
Sbjct: 228 CVFGGAPKGPQIRDLERGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFE 287
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI + + D QV++ SAT
Sbjct: 288 PQIRKIMGQIRPDRQVLMWSAT 309
Score = 64.9 bits (151), Expect = 2e-09
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI--DTSIRE 404
I+E + GF KP+AIQ + + + GRD++ AQ+G+GK + L I +R
Sbjct: 133 ILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRR 192
Query: 405 CQ---ALIMAPTRELAQQIQKVVIALGDHLNA 491
AL++APTRELAQQIQ+V G +NA
Sbjct: 193 GDGPIALVLAPTRELAQQIQQVATDFGQRINA 224
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + E ++L++G +VV TPGR+ DM+ +AL VLDEAD M GF+
Sbjct: 335 VYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEP 394
Query: 683 QIHDVFKMLSADVQVILLSAT 745
Q+ + + D Q +L SAT
Sbjct: 395 QVRSIVGQIRPDRQTLLFSAT 415
Score = 50.0 bits (114), Expect = 6e-05
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI--DTSIRECQ---ALIM 422
+EKP+AIQ +A+ + GRDVI A++G+GK A F + ++ I ++ + +I
Sbjct: 248 YEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVIC 307
Query: 423 APTRELAQQI 452
APTRELA QI
Sbjct: 308 APTRELAHQI 317
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GF++PS IQ +AI G D+I QA+SGTGK F+ L + Q L++APTR
Sbjct: 45 GFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTR 104
Query: 435 ELAQQIQKVVIALGDHLNA-KCH 500
E+A QI VV+A+G + +CH
Sbjct: 105 EIAVQIHAVVMAIGSAMEGLECH 127
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/83 (39%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML----SRGF 676
GG + +D + L+ H+ +G+PGR+ +I AL ++I+LFVLDEAD++L S F
Sbjct: 131 GGRPISQDKQHLKK-CHIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSF 189
Query: 677 KDQIHDVFKMLSADVQVILLSAT 745
++QI+ ++ L A+ Q++ LSAT
Sbjct: 190 QEQINWIYSSLPANKQMLALSAT 212
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GF++PS IQ +AI G D+I +A+SGTGK F I L+ ID I Q LI+APTR
Sbjct: 15 GFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDIDISSVQVLILAPTR 74
Query: 435 ELAQQIQKVVIALG 476
E+A QI +V ++G
Sbjct: 75 EIAVQIAQVFSSVG 88
Score = 57.2 bits (132), Expect = 4e-07
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + D +++ + + VG PGR+ +I + L ++LFVLDEAD+++ F+ I
Sbjct: 101 GGLAIENDKKKVNN-CQIAVGAPGRIRHLIDKGFLKVENVRLFVLDEADKLMETSFQKDI 159
Query: 689 HDVFKMLSADVQVILLSAT 745
+ +F L QVI SAT
Sbjct: 160 NYIFSKLPLSKQVIASSAT 178
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI-----DTSIRECQALI 419
G+EK + IQQ+AI +G D+ A AQ+GTGK A FS+ ++QQ+ S + +ALI
Sbjct: 20 GYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQQLLESGKSASRKTARALI 79
Query: 420 MAPTRELAQQIQKVVIALGDHLN 488
APTRELA+QI + A + N
Sbjct: 80 FAPTRELAEQIADNIKAYTKYTN 102
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
+ GG + R LE+GV ++V TPGR+ + I + I+ V DEAD +L GF +
Sbjct: 108 IFGGRKMSSQERMLENGVDILVATPGRLEEHIESGNVSVANIEFLVFDEADRILDMGFIN 167
Query: 683 QIHDVFKMLSADVQVILLSATNA 751
+ + + + Q+++ SAT +
Sbjct: 168 AVRKIMLDVETNPQIMMFSATTS 190
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = +2
Query: 506 HGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 685
+GG ++ + +L GV V+V TPGR+ D+ + A+ + ++ VLDEAD ML GF +
Sbjct: 109 YGGVSINPQMMKLRKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARE 168
Query: 686 IHDVFKMLSADVQVILLSAT 745
++ VF L A Q +L SAT
Sbjct: 169 LNAVFAALPAQRQTLLFSAT 188
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI-----DTSIRECQAL 416
L ++ P+ +Q +AI + G+DV+A AQ+GTGK A F++ +LQ++ S + L
Sbjct: 19 LNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQRLVQHGPAVSSNRARVL 78
Query: 417 IMAPTRELAQQIQKVVIALGDHLNAK 494
++ PTRELA+Q+ + IA G L+ +
Sbjct: 79 VLVPTRELAEQVLQSFIAYGKGLDLR 104
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 494 MPCLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG 673
+ + GG + + L+ H+V+ TPGR+ D+I R A+ + +K +LDEADEMLS G
Sbjct: 104 LEAVFGGEKIDRQMNNLKRTTHIVIATPGRLIDLIERGAVDISHVKTVILDEADEMLSMG 163
Query: 674 FKDQIHDVFKMLS-ADVQVILLSAT 745
FK ++ + K + +D + L SAT
Sbjct: 164 FKQDLNRILKFTTKSDRKTWLFSAT 188
Score = 66.1 bits (154), Expect = 9e-10
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
+G KP+ IQ++AI ++ D I AQ+GTGK A F + +L ID + QALI++P
Sbjct: 20 IGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPVLHHIDANSDHIQALILSP 79
Query: 429 TRELAQQIQK 458
TREL QQI+K
Sbjct: 80 TRELVQQIKK 89
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + I+ L+ G +VVGTPGRV D + RR L + I +LDEADEM++ GF D +
Sbjct: 105 GGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDM 164
Query: 689 HDVF-KMLSADVQVILLSAT 745
+ K+ + Q +L SAT
Sbjct: 165 RFIMDKIPAVQRQTMLFSAT 184
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/67 (43%), Positives = 48/67 (71%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
+GF++P+ IQ+ +I +QG D++ QAQ+GTGK F I +++++ + Q+LI+APT
Sbjct: 20 MGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLILAPT 78
Query: 432 RELAQQI 452
RELA Q+
Sbjct: 79 RELAMQV 85
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDT------SIRECQAL 416
G+ +P+ IQQ+AI ++GRD++A AQ+GTGK A F++ +LQ + T R +AL
Sbjct: 20 GYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRAL 79
Query: 417 IMAPTRELAQQIQKVVIALGDHLNAK 494
I+ PTRELA QI + V +LN +
Sbjct: 80 ILTPTRELAAQIGENVRDYSKYLNIR 105
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG ++ + +L GV V+V TPGR+ D+ + A+ + +++ VLDEAD ML GF I
Sbjct: 111 GGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDI 170
Query: 689 HDVFKMLSADVQVILLSAT 745
V L A Q +L SAT
Sbjct: 171 RRVLTKLPAKRQNLLFSAT 189
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Frame = +2
Query: 479 SLEC*MPCLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITR---RALHANTIKLFVLDE 649
+LE C +GG+ +++ I L+ G H++V TPGR+ D++ R L + + V+DE
Sbjct: 485 ALELTAVCAYGGSPIKDQIAALKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVIDE 544
Query: 650 ADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 745
AD M GF+ Q+ + + + D Q +L SAT
Sbjct: 545 ADRMFDMGFEPQVLKLTQSIRPDRQTVLFSAT 576
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI---------DTSIRE 404
L ++KP++IQ +AI + GRDVI+ A++G+GK F + +L+ I T++
Sbjct: 396 LRYDKPTSIQAQAIPAVMSGRDVISVAKTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSG 455
Query: 405 CQA----LIMAPTRELAQQIQK 458
+ +I+ PTREL QI +
Sbjct: 456 ASSHPLGVIITPTRELCVQIYR 477
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LG+ + +Q A+ + G+DV QA++G+GK A F + +LQQID S+ + QAL++ PT
Sbjct: 21 LGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPT 80
Query: 432 RELAQQI 452
RELA Q+
Sbjct: 81 RELADQV 87
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +2
Query: 542 LESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 721
L+ H++V TPGR+ D + + + + + V+DEAD ML GF D I DV + A
Sbjct: 119 LQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASR 178
Query: 722 QVILLSAT 745
Q +L SAT
Sbjct: 179 QTLLFSAT 186
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/84 (36%), Positives = 61/84 (72%), Gaps = 5/84 (5%)
Frame = +3
Query: 228 RIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI---DTSI 398
R+++ LG+ +P+ IQ++AI ++G+D++A+A++G+GK A +++ ++Q+I S+
Sbjct: 16 RLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPVIQRILASKQSV 75
Query: 399 RE--CQALIMAPTRELAQQIQKVV 464
RE +ALI+ PT+EL QQ+Q ++
Sbjct: 76 REQDVKALILVPTKELGQQVQTMI 99
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/85 (38%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTS----IRECQALI 419
LG+E+P+ IQ +AI ++G D++A+AQ+GTGK A+F++ I++++ + R +AL+
Sbjct: 22 LGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIEKLSKNPIDGYRPVRALV 81
Query: 420 MAPTRELAQQIQKVVIALGDHLNAK 494
+APTRELA Q+ + G L +
Sbjct: 82 LAPTRELAIQVADNTLEYGRDLGMR 106
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG V I++L+ G ++V TPGR+ D++ ++A+ ++ VLDEAD ML GF D
Sbjct: 110 VYGGVPVENQIKRLKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFID 169
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + D Q +L +AT
Sbjct: 170 PIQKIMDYAADDRQTLLFTAT 190
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/81 (37%), Positives = 50/81 (61%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
+ G ++++ I +L+ VH+VV TPGR+ D I R ++ +K V+DEAD+M ++GF +
Sbjct: 105 IFGKQSIKDQIAELKQRVHIVVATPGRILDHINRGSIKLENVKYLVIDEADKMFNKGFVE 164
Query: 683 QIHDVFKMLSADVQVILLSAT 745
Q+ + L + V L SAT
Sbjct: 165 QMEKILLNLPKEKIVSLFSAT 185
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/84 (33%), Positives = 53/84 (63%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
LG+ PS +Q+ I ++G++++ ++++G+GK A+F+I + + I+ QALI+ PT
Sbjct: 21 LGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCENINVDYNNIQALIVVPT 80
Query: 432 RELAQQIQKVVIALGDHLNAKCHA 503
RELA Q++ + +G +C A
Sbjct: 81 RELALQVKDEISDIGRLKKVRCSA 104
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 67.3 bits (157), Expect = 4e-10
Identities = 28/79 (35%), Positives = 51/79 (64%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGT+V +D +L G +++ TPGR+ D+I ++A + ++++ VLDEAD+ML GF +
Sbjct: 111 GGTSVNKDRNKLHRGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHAL 170
Query: 689 HDVFKMLSADVQVILLSAT 745
+ +++ + Q + SAT
Sbjct: 171 RRISQLVPKERQTLFFSAT 189
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATF---SISILQQIDTSI--RECQALI 419
G+ P+ IQ++AI P ++GRD++ AQ+GTGK A F SI L++ D I + C+ L+
Sbjct: 21 GYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLV 80
Query: 420 MAPTRELAQQI 452
+APTREL QI
Sbjct: 81 LAPTRELVSQI 91
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG N+ + L +G +VV T GR+ D + ++ + N +++ VLDEAD ML GF D
Sbjct: 139 LFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLDMGFID 198
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + +ML Q +L SAT
Sbjct: 199 DIRKIMQMLPKQRQTLLFSAT 219
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI--------DTSIRECQ 410
G+E P+ IQ AI + G D++A AQ+GTGK A F + L+++ ++ +
Sbjct: 48 GYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVR 107
Query: 411 ALIMAPTRELAQQIQKVV 464
L++ PTRELA QI + V
Sbjct: 108 MLVLTPTRELADQIDQNV 125
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG + I++ E G ++V TPGR+ D++ R+AL + + VLDEAD+ML GF +
Sbjct: 180 GGVAIGPQIKRAERGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHAL 239
Query: 689 HDVFKMLSADVQVILLSAT 745
+ +L A+ Q +L SAT
Sbjct: 240 RKIAPLLPAERQTMLFSAT 258
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Frame = +3
Query: 267 PSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI-----DTSIRECQALIMAPT 431
P+ IQ RAI + GRDV+ AQ+GTGK A F + +L + + R C+ LI+APT
Sbjct: 94 PTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDALMKAGTKPAPRTCRGLILAPT 153
Query: 432 RELAQQIQKVVIAL--GDHL 485
REL QI + + A G HL
Sbjct: 154 RELVSQICESLRAFTEGSHL 173
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +2
Query: 479 SLEC*MPCLH-GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEAD 655
SLE C+ GGTN+ + +L +GV + V TPGR D + + + I VLDEAD
Sbjct: 217 SLESLKNCIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEAD 276
Query: 656 EMLSRGFKDQIHDVFKMLSADVQVILLSAT 745
ML GF+ QI ++ + L Q +L SAT
Sbjct: 277 RMLDMGFEPQIREIMRSLPEKHQTLLFSAT 306
Score = 63.3 bits (147), Expect = 6e-09
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQ--IDTSIRECQ---ALIM 422
+ +PS+IQ +A+ + GRD++ A++G+GK A F+I +LQ + IR AL++
Sbjct: 138 YTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVL 197
Query: 423 APTRELAQQIQKVVIALGDHLNAKCHACMVAPMSVK 530
APTRELAQQI+K V A L + + +V +++
Sbjct: 198 APTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIE 233
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 67.3 bits (157), Expect = 4e-10
Identities = 29/81 (35%), Positives = 58/81 (71%), Gaps = 5/81 (6%)
Frame = +3
Query: 228 RIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI-----DT 392
RI+ ++GF+ PS +Q ++I +QG+D++A+A++G+GK A +SI I+Q++ +
Sbjct: 33 RILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQKVLMAKEKS 92
Query: 393 SIRECQALIMAPTRELAQQIQ 455
+I+ +A+++ PTREL +Q++
Sbjct: 93 NIKGVKAVVLVPTRELCEQVK 113
Score = 37.9 bits (84), Expect = 0.27
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 560 VVVGTPGRVYDMITRRALHA-NTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 736
V+V TP R+ + + + +T+ + V+DEAD +L+ G ++ I+ + L Q L+
Sbjct: 151 VIVSTPTRLVQHLENKTIQLQSTLDILVIDEADLVLNYGHQNDINIIKSFLPKVCQCFLM 210
Query: 737 SAT 745
SAT
Sbjct: 211 SAT 213
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C +GG + R L +GV +V+GTPGR+ D++ + H ++++ VLDEAD ML GF
Sbjct: 217 CAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKH--HLSSVQYLVLDEADRMLDMGFM 274
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI + + + Q ++ SAT
Sbjct: 275 PQIESLIDQIPKERQTLMFSAT 296
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +3
Query: 240 RHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ--- 410
+HI GF P+ IQ ++ + G D++ A +G+GK F + L +I + +
Sbjct: 124 QHIFQGFTAPTVIQGQSWPIILGGNDLVGLAATGSGKTLAFLLPALLKIISLPKRPSYGA 183
Query: 411 ---ALIMAPTRELAQQIQKV 461
L+MAPTRELAQQI++V
Sbjct: 184 TPLVLVMAPTRELAQQIEEV 203
>UniRef50_Q54CH6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 248
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/86 (36%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 494 MPCLHGGTNVREDIRQLESG-VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 670
+ C+ GG + DI L+ G +++GTPGR+ D+ +R+ + IK+ V DE DE+LSR
Sbjct: 135 LSCI-GGVKISMDIEILKKGNTQILLGTPGRISDLFSRKRFDTDNIKILVFDELDEILSR 193
Query: 671 GFKDQIHDVFKMLSADVQVILLSATN 748
GF+ Q+ D+ K L+ + + ++ +T+
Sbjct: 194 GFECQLEDIIKPLNNNNNLQIIVSTS 219
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C+ GG + E IR L G+ +V+ TPGR+ D++ + + + ++ +LDEAD ML GF+
Sbjct: 224 CVFGGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLILDEADRMLDMGFE 283
Query: 680 DQIHDV---FKMLSA-DVQVILLSAT 745
Q+ +V + M A D Q +L SAT
Sbjct: 284 PQMQEVINGWDMPPADDRQTMLFSAT 309
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIR--ECQALIMAP 428
G++ P+ +Q+ +I + G D+I +Q+G+GK A F + ++ Q+ + + + P
Sbjct: 140 GYKVPTPVQRYSIPYILNGEDLIVTSQTGSGKTAAFMLPVITQLIGTCHSPNPSCVALCP 199
Query: 429 TRELAQQI 452
TRELA QI
Sbjct: 200 TRELAIQI 207
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 67.3 bits (157), Expect = 4e-10
Identities = 27/82 (32%), Positives = 49/82 (59%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
CL GG ++ +R +++G +V++ TPGR D+++ A + + V+DEAD M GF+
Sbjct: 206 CLVGGNDIENQLRAIKNGSNVIIATPGRFIDLLSSSAFNIKKVSYLVIDEADRMFDLGFE 265
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
Q+ + + + D Q ++ SAT
Sbjct: 266 PQVIRIAERMRKDRQTLMFSAT 287
Score = 57.2 bits (132), Expect = 4e-07
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
Frame = +3
Query: 243 HIRL-GFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKNATFSI----SILQQIDTSIRE 404
H+RL GF++P++IQ +AI PCI GRD+I A +G+GK F I +L Q T E
Sbjct: 115 HLRLRGFKQPTSIQCQAI-PCILSGRDIIGCAVTGSGKTLAFIIPCLLHVLAQPPTGQYE 173
Query: 405 CQALIMAPTRELAQQ 449
A+I++PTRELA Q
Sbjct: 174 AAAVILSPTRELAYQ 188
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C GGT+ ++ I +L+ H+VVGTPGR+ D+I +AL + + V+DEAD ML GF
Sbjct: 108 CFIGGTDKQKSIDKLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFL 167
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
+ + + D+Q+++ SAT
Sbjct: 168 ADVDYIGSRMPEDLQMLVFSAT 189
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
I++ RLGF +P+ IQ+R I ++ VI Q+Q+GTGK + + +L +ID + Q
Sbjct: 15 IIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQ 74
Query: 411 ALIMAPTRELAQQIQKVVIAL-----GDHLNAKC 497
+I APTRELA QI + + + G + +KC
Sbjct: 75 VVITAPTRELANQIYQEALKITQGEEGSQIRSKC 108
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Frame = +3
Query: 243 HIRLGFEKPSAIQQRAIMPCIQG---RDVIAQAQSGTGKNATFSISILQQIDTSIRECQA 413
H +GF +PS IQ +P I +D+IAQA +G+GK F + +L ++D + + QA
Sbjct: 116 HDEMGFSRPSKIQA-VTLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQA 174
Query: 414 LIMAPTRELAQQIQKVVIALGDHLNAKCHACMVAP 518
+ + PTRELAQQ + V++ +G C AC + P
Sbjct: 175 ICICPTRELAQQNKSVLMRMGKFTGITC-ACAIPP 208
Score = 41.9 bits (94), Expect = 0.017
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 560 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR-GFKDQIHDVFKML---SADVQV 727
VV+GT G + I + + N IK+ V DEAD ML+ GF+ + + + + QV
Sbjct: 226 VVIGTSGTLMKWINHKKILTNDIKILVFDEADHMLAEDGFRSDSERIMRDIQRSAGGCQV 285
Query: 728 ILLSAT 745
+L SAT
Sbjct: 286 LLFSAT 291
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/79 (37%), Positives = 53/79 (67%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGT++++DI ++ +GVHV+VGTPGR+ D++ +R + + V DEAD++L F + +
Sbjct: 212 GGTSMQDDIIRVSNGVHVMVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLDVTFGETV 271
Query: 689 HDVFKMLSADVQVILLSAT 745
+ +L + Q++L SAT
Sbjct: 272 TKLLDLLPREKQMLLYSAT 290
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/78 (32%), Positives = 51/78 (65%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
+++R +G++ PS +Q +I + G++++ ++++GTGK A++ + +L I++S Q
Sbjct: 119 LLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLNMINSSELSIQ 178
Query: 411 ALIMAPTRELAQQIQKVV 464
+I+ P RELA QI + V
Sbjct: 179 GIILVPIRELALQISRNV 196
>UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX1 - Homo
sapiens (Human)
Length = 740
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 6/85 (7%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD-- 682
GG R+ + LE+GV +VVGTPGR+ D+++ L+ + ++ VLDEAD +LS+G+ D
Sbjct: 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384
Query: 683 -QIHDVFKMLSAD---VQVILLSAT 745
++H+ +++D +QVI+ SAT
Sbjct: 385 NRMHNQIPQVTSDGKRLQVIVCSAT 409
Score = 36.3 bits (80), Expect = 0.83
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +3
Query: 267 PSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
P+ IQ +I + G DV+ A++G+GK FSI ++Q + ++++ Q
Sbjct: 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ 72
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 67.3 bits (157), Expect = 4e-10
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG V E + + GVH+VV TPGR+ DM+ ++ L + + +DEAD M+ GF++ +
Sbjct: 295 GGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDV 354
Query: 689 HDVFKMLSADVQVILLSAT 745
+F Q +L SAT
Sbjct: 355 RTIFSFFKGQRQTLLFSAT 373
Score = 41.9 bits (94), Expect = 0.017
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISIL-----QQIDTSIRECQ--- 410
G + P+ IQ + + + GRD+I A +G+GK F + ++ Q+ +
Sbjct: 196 GIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPY 255
Query: 411 ALIMAPTRELAQQIQKVVIALGDHLNA 491
LI+ P+RELA+Q +++ HL A
Sbjct: 256 GLIICPSRELAKQTHEIIQHYSKHLQA 282
>UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and RNA
helicases; n=1; Bifidobacterium longum DJO10A|Rep:
COG0513: Superfamily II DNA and RNA helicases -
Bifidobacterium longum DJO10A
Length = 670
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/81 (37%), Positives = 51/81 (62%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG IR L++G +VV PGR+ D++ ++AL +++++ V+DEADEM GF
Sbjct: 143 VYGGVKYIHQIRDLKAGADIVVACPGRLEDLLRQQALTLSSVEVVVIDEADEMADMGFLP 202
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + + +S D Q +L SAT
Sbjct: 203 PVKRLLEQISPDAQHMLFSAT 223
Score = 30.3 bits (65), Expect(2) = 0.054
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +3
Query: 276 IQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI 386
IQ + + GRD++ + ++G+GK FSI ++ ++
Sbjct: 36 IQADTLPDSLAGRDILGRGRTGSGKTLAFSIPLVTRL 72
Score = 29.1 bits (62), Expect(2) = 0.054
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 378 QQIDTSIRECQALIMAPTRELAQQIQKVVIAL 473
++ D + + L++APTRELA QI V++ L
Sbjct: 101 RRADDFLPHPRGLVLAPTRELANQINDVLMPL 132
>UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=3;
Bifidobacterium|Rep: Possible ATP-dependent RNA helicase
- Bifidobacterium longum
Length = 728
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/81 (37%), Positives = 51/81 (62%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG IR L++G +VV PGR+ D++ ++AL +++++ V+DEADEM GF
Sbjct: 159 VYGGVKYIHQIRDLKAGADIVVACPGRLEDLLRQQALTLSSVEVVVIDEADEMADMGFLP 218
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ + + +S D Q +L SAT
Sbjct: 219 PVKRLLEQISPDAQHMLFSAT 239
Score = 30.3 bits (65), Expect(2) = 0.054
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +3
Query: 276 IQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI 386
IQ + + GRD++ + ++G+GK FSI ++ ++
Sbjct: 52 IQADTLPDSLAGRDILGRGRTGSGKTLAFSIPLVTRL 88
Score = 29.1 bits (62), Expect(2) = 0.054
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 378 QQIDTSIRECQALIMAPTRELAQQIQKVVIAL 473
++ D + + L++APTRELA QI V++ L
Sbjct: 117 RRADDFLPHPRGLVLAPTRELANQINDVLMPL 148
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 66.9 bits (156), Expect = 5e-10
Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Frame = +3
Query: 216 EPQRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTS 395
EP R +E LG+E P+ IQ +AI ++G DV+ AQ+GTGK A+F++ +LQ++ S
Sbjct: 300 EPIMRAIEE---LGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQKLAGS 356
Query: 396 ---IRECQALIMAPTRELAQQIQKVVIALGDHLNAKCHACMVAPMSV 527
R ++LI+ PTRELA Q+ + G +L HA ++ S+
Sbjct: 357 RARARMPRSLILEPTRELALQVAENFKLYGKYLRL-THALLIGGESM 402
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/83 (38%), Positives = 42/83 (50%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG ++ E L GV V++ TPGR+ D+ R L V+DEAD ML GF
Sbjct: 396 LIGGESMAEQRDVLNRGVDVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIP 455
Query: 683 QIHDVFKMLSADVQVILLSATNA 751
I + +L A Q + SAT A
Sbjct: 456 DIEKIVALLPAHRQTLFFSATMA 478
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 66.9 bits (156), Expect = 5e-10
Identities = 37/81 (45%), Positives = 46/81 (56%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG L GV VVVGTPGR+ D + R L + I+ VLDEADEMLS GF D
Sbjct: 108 VYGGAAYGPQENALRRGVDVVVGTPGRLIDHLERGNLDLSAIQYAVLDEADEMLSVGFAD 167
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + A Q +L SAT
Sbjct: 168 AIETILQQTPAARQTMLFSAT 188
Score = 48.0 bits (109), Expect = 3e-04
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDT----SIRE----CQ 410
G + S IQ ++ + G+D+I +A++GTGK F++ I+Q + RE +
Sbjct: 19 GITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNLTAPDGRGSRERGRLPR 78
Query: 411 ALIMAPTRELAQQIQKVVIALGDHLN 488
A+++APTRELA+Q+ + G L+
Sbjct: 79 AIVIAPTRELAKQVAEEFSKSGPQLS 104
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMI---TRRALHANTIKLFVLDEADEMLSR 670
C++GG ++ E I +L+ G +VV TPGR+ D++ RR + + VLDEAD M
Sbjct: 615 CVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDM 674
Query: 671 GFKDQIHDVFKMLSADVQVILLSAT 745
GF QI+ + + D Q I+ SAT
Sbjct: 675 GFGPQINCIVDSIRPDRQTIMFSAT 699
Score = 50.4 bits (115), Expect = 5e-05
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ-----ALIM 422
+EKP++IQ + I + GRD+I A++G+GK F + + + I + ALIM
Sbjct: 529 YEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIM 588
Query: 423 APTRELAQQI 452
+PTRELA QI
Sbjct: 589 SPTRELALQI 598
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI---DTSIRECQALI 419
+LGF +P+ IQ +AI + G+D++A A +G+GK A F + +L+++ D+ R + LI
Sbjct: 207 KLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLI 266
Query: 420 MAPTRELAQQIQKVVIALGDHLN 488
+ PTRELA Q Q V+ L N
Sbjct: 267 LLPTRELALQCQSVMENLAQFSN 289
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQ 685
GG + + +L VV+ TPGR+ D ++ + + +++ +LDEAD +L GFKD+
Sbjct: 297 GGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDE 356
Query: 686 IHDVFKMLSADVQVILLSAT 745
I+ + + + Q +L SAT
Sbjct: 357 INKIVESCPTNRQTMLFSAT 376
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/80 (38%), Positives = 52/80 (65%)
Frame = +3
Query: 225 RRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRE 404
++ +ER F++PS +Q RAI + GRD++ QA+SGTGK FS+ ++ +D+
Sbjct: 31 QKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSH 90
Query: 405 CQALIMAPTRELAQQIQKVV 464
Q +I+ PTRE++ QI++ V
Sbjct: 91 IQKVIVTPTREISVQIKETV 110
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +2
Query: 560 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLS 739
+V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV + S
Sbjct: 143 IVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFS 202
Query: 740 AT 745
AT
Sbjct: 203 AT 204
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 66.9 bits (156), Expect = 5e-10
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMIT---RRALHANTIKLFVLDEADEMLSR 670
C GG+ +++ I L+ GV +VV TPGR+ D++T + + I V+DEAD +
Sbjct: 385 CCTGGSEMKKQINDLKRGVEIVVATPGRLIDILTLNSGKLISTKRITFVVMDEADRLFDM 444
Query: 671 GFKDQIHDVFKMLSADVQVILLSAT 745
GF+ QI + K + D Q +L SAT
Sbjct: 445 GFEPQITQIMKTVRPDKQCVLFSAT 469
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDT----SIREC--QA 413
L +++P+AIQ +AI + GRD+I +++G+GK ++ + +L+QI S E
Sbjct: 295 LKYDEPTAIQSQAIPAIMSGRDLIGISKTGSGKTISYILPMLRQIKAQRTLSKNETGPLG 354
Query: 414 LIMAPTRELAQQIQKVV 464
LI+APTRELA QI + V
Sbjct: 355 LILAPTRELALQINEEV 371
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/81 (40%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
++GG + IRQLE VVV TPGR+ D I R + +++ VLDEAD ML GF D
Sbjct: 103 IYGGVAINPQIRQLERA-DVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFID 161
Query: 683 QIHDVFKMLSADVQVILLSAT 745
+ ++ +D Q ++ SAT
Sbjct: 162 DVEEIIDECPSDRQTMMFSAT 182
Score = 61.3 bits (142), Expect = 3e-08
Identities = 29/75 (38%), Positives = 47/75 (62%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTRE 437
FE+P+ IQ+ AI ++G+D+I A +G+GK F I+Q+I+ +AL++ PTRE
Sbjct: 22 FEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQKIEKG-NGIRALVLTPTRE 80
Query: 438 LAQQIQKVVIALGDH 482
LA+Q+Q + H
Sbjct: 81 LAEQVQNSLKEFSRH 95
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 66.9 bits (156), Expect = 5e-10
Identities = 32/82 (39%), Positives = 44/82 (53%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GG IR L GV +V+ TPGR+ DM+ + + VLDEAD ML GF+
Sbjct: 357 CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFE 416
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI + + D Q + SAT
Sbjct: 417 PQIRKIVAQIRPDRQTLYWSAT 438
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ-----ALI 419
GF +P+ IQ + ++GRD+I AQ+G+GK ++ + L + R Q LI
Sbjct: 270 GFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLI 329
Query: 420 MAPTRELAQQIQK 458
+APTRELA QIQ+
Sbjct: 330 LAPTRELAVQIQQ 342
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 66.9 bits (156), Expect = 5e-10
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GG + L GVH++V TPGR+ D + + ++ + + VLDEAD ML GF+
Sbjct: 207 CVYGGAPKGPQLGLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFE 266
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
Q+ + + D Q ++ SAT
Sbjct: 267 PQVRKICGQIRPDRQTVMFSAT 288
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI--DTSIRE---CQALIM 422
F P+ +Q ++ + GRD++ A++G+GK F + L I +R +++
Sbjct: 122 FTAPTPVQAQSWPVLLSGRDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVL 181
Query: 423 APTRELAQQIQK 458
APTRELAQQI++
Sbjct: 182 APTRELAQQIEE 193
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 497 PCL-HGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG 673
PC+ +GG ++ + IR LE G H++V TPGR+ DM+ R + + K VLDEAD ML G
Sbjct: 297 PCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG 356
Query: 674 FKDQIHDV 697
F+ QI +
Sbjct: 357 FEPQIRRI 364
Score = 39.9 bits (89), Expect = 0.067
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 18/83 (21%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI-----DTSIRECQ---- 410
+ +P+ +Q+ AI + RD++A AQ+G+GK A F + IL QI ++R +
Sbjct: 200 YTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGR 259
Query: 411 ---------ALIMAPTRELAQQI 452
+L++APTRELA QI
Sbjct: 260 YGRRKQYPISLVLAPTRELAVQI 282
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 66.9 bits (156), Expect = 5e-10
Identities = 34/75 (45%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPT 431
F+KPS IQ+RA+ + R++IAQ+QSGTGK A FS+++L +++ QA+ +AP+
Sbjct: 112 FQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPS 171
Query: 432 RELAQQIQKVVIALG 476
RELA+Q +VV +G
Sbjct: 172 RELARQTLEVVQEMG 186
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +2
Query: 560 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILL 736
V+VGTPG V D++ R+ + IK+FVLDEAD ML +G DQ V + L D Q++L
Sbjct: 211 VIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLVLF 270
Query: 737 SATNA 751
SAT A
Sbjct: 271 SATFA 275
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 66.9 bits (156), Expect = 5e-10
Identities = 32/82 (39%), Positives = 44/82 (53%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GG IR L GV V + TPGR+ DM+ + + VLDEAD ML GF+
Sbjct: 240 CVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFE 299
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI + + D Q ++ SAT
Sbjct: 300 PQIRKIIGQIRPDRQTLMWSAT 321
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ-----ALI 419
GF P+AIQ + + GRDV+ A++G+GK T+ + + I+ L+
Sbjct: 153 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLV 212
Query: 420 MAPTRELAQQIQKVVIALG 476
+APTRELA QIQ+ + G
Sbjct: 213 LAPTRELAVQIQEEMKKFG 231
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 66.5 bits (155), Expect = 7e-10
Identities = 27/79 (34%), Positives = 44/79 (55%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG V E + + GVH++V TPGR+ DM+ ++ + + +DEAD M+ GF++ +
Sbjct: 297 GGVPVSESLDVISRGVHIMVATPGRLMDMLDKKMVKLGVCRYLCMDEADRMIDMGFEEDV 356
Query: 689 HDVFKMLSADVQVILLSAT 745
+F Q +L SAT
Sbjct: 357 RTIFSFFEGQRQTLLFSAT 375
Score = 39.9 bits (89), Expect = 0.067
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISIL-----QQIDTSIRECQ--- 410
G KP+ IQ + I + GRD+I A +G+GK F + ++ Q++ +
Sbjct: 198 GITKPTPIQVQGIPAVLSGRDIIGIAFTGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPY 257
Query: 411 ALIMAPTRELAQQIQKVV 464
LI+ P+RELA+Q ++
Sbjct: 258 GLIICPSRELAKQTYDII 275
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L+GG N R L+ H+++GTPGR+ D ++R L + +K ++DEADEML GF +
Sbjct: 110 LYGGQNYRIQFNDLKKNPHIIIGTPGRLLDHLSR-GLDISKLKTLIIDEADEMLRMGFIE 168
Query: 683 QIHDVFKMLSADVQVILLSAT 745
I + + + Q L SAT
Sbjct: 169 DIEHIIRYVPTHRQTALFSAT 189
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/77 (41%), Positives = 46/77 (59%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
IV+ +G++ P IQ + I ++G D++ A +G+GK A F + +LQ ID R Q
Sbjct: 17 IVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLLPLLQNIDIKQRFVQ 76
Query: 411 ALIMAPTRELAQQIQKV 461
LI+ PTRELA QI V
Sbjct: 77 GLIIVPTRELAIQIGHV 93
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 66.5 bits (155), Expect = 7e-10
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQ-IDTSIRECQALIMAP 428
LGF +P+ IQ AI P + GRDV+A A +G+GK A F + IL Q ID +AL++ P
Sbjct: 19 LGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQLIDRPRGTTRALVITP 78
Query: 429 TRELAQQIQKVVIALGDH 482
TRELA QI + + L H
Sbjct: 79 TRELAAQILEDLNDLAVH 96
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/79 (36%), Positives = 39/79 (49%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG ++R GV V++GTPGR+ D ++ VLDEAD ML GF I
Sbjct: 106 GGVSIRPQEHAFRRGVDVLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDI 165
Query: 689 HDVFKMLSADVQVILLSAT 745
+ K + A Q + SAT
Sbjct: 166 RRILKHIPARRQTLFFSAT 184
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 846,973,976
Number of Sequences: 1657284
Number of extensions: 19175993
Number of successful extensions: 56466
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 51294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55350
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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