Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00158
(761 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 5e-34
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 2e-28
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 83 2e-16
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 83 2e-16
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 74 1e-13
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 71 8e-13
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 65 5e-11
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 64 9e-11
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 64 9e-11
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 62 5e-10
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 61 8e-10
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 60 3e-09
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 59 4e-09
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 58 1e-08
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 54 1e-07
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 52 5e-07
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 48 6e-06
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 48 6e-06
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 48 8e-06
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 47 2e-05
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 38 0.012
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 38 0.012
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 37 0.021
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 36 0.036
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 36 0.047
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 35 0.083
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 34 0.14
SB_2863| Best HMM Match : Asp (HMM E-Value=1.2e-07) 33 0.19
SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12) 30 1.8
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 30 1.8
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_18611| Best HMM Match : IBN_N (HMM E-Value=7.4e-06) 29 3.1
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 29 4.1
SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29) 29 5.5
SB_39648| Best HMM Match : DUF1110 (HMM E-Value=1.7) 28 7.2
SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0) 28 7.2
SB_48110| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_14745| Best HMM Match : Histone (HMM E-Value=5.8e-19) 28 9.5
SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_26279| Best HMM Match : S-antigen (HMM E-Value=3) 28 9.5
SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08) 28 9.5
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 141 bits (342), Expect = 5e-34
Identities = 67/96 (69%), Positives = 82/96 (85%)
Frame = +3
Query: 222 QRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIR 401
+RR+V GFEKPSAIQQRAI P ++GRDVIAQAQSGTGK ATFSIS+LQ IDT +R
Sbjct: 6 ERRVVTDETE-GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLR 64
Query: 402 ECQALIMAPTRELAQQIQKVVIALGDHLNAKCHACM 509
E QAL+++PTRELA QIQKVV+ALGD+++ +CHAC+
Sbjct: 65 EPQALVLSPTRELANQIQKVVLALGDYMSVQCHACI 100
Score = 110 bits (265), Expect = 1e-24
Identities = 53/89 (59%), Positives = 70/89 (78%)
Frame = +2
Query: 479 SLEC*MPCLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 658
S++C C+ GGTN+ EDIR+L+ G H+V GTPGRV+DMI RR L +IK+ VLDEADE
Sbjct: 93 SVQC-HACI-GGTNIGEDIRKLDYGQHIVSGTPGRVFDMIRRRNLRTRSIKMLVLDEADE 150
Query: 659 MLSRGFKDQIHDVFKMLSADVQVILLSAT 745
ML++GFK+QI+DV++ L QV+LLSAT
Sbjct: 151 MLNKGFKEQIYDVYRYLPPATQVVLLSAT 179
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 123 bits (296), Expect = 2e-28
Identities = 60/79 (75%), Positives = 65/79 (82%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GGTNVRED +LE GVHVVVGTPGRV+DMI R L+ IKLFVLDEADEMLSRGFKDQI
Sbjct: 195 GGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVLNTRDIKLFVLDEADEMLSRGFKDQI 254
Query: 689 HDVFKMLSADVQVILLSAT 745
+DVF L VQV+LLSAT
Sbjct: 255 YDVFTRLPTSVQVVLLSAT 273
Score = 119 bits (286), Expect = 3e-27
Identities = 67/113 (59%), Positives = 79/113 (69%), Gaps = 28/113 (24%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQ----------------------GRDVIAQAQSGTGKNATFSI 368
GFEKPSAIQQRAI PC Q RDVIAQAQSGTGK ATF+I
Sbjct: 82 GFEKPSAIQQRAIRPCCQEFSPSHVCYNQLNLTKNHYVLSARDVIAQAQSGTGKTATFAI 141
Query: 369 SILQQIDTSIRE------CQALIMAPTRELAQQIQKVVIALGDHLNAKCHACM 509
SILQ+IDT+ ++ CQAL++APTRELAQQIQKVV+ALGD+++ KCHAC+
Sbjct: 142 SILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHVKCHACI 194
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +1
Query: 166 GTLDTDWDQVVETFDDMNLKEELLRGIYA 252
G ++WD+VVE+FDDMNLKE LLRGIYA
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYA 80
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/80 (45%), Positives = 57/80 (71%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GF+KPS IQ+ +I + GRD++A+A++GTGK A + + +L++ DT+ QAL++ PTR
Sbjct: 66 GFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTR 125
Query: 435 ELAQQIQKVVIALGDHLNAK 494
ELA Q ++ I LG H+ A+
Sbjct: 126 ELALQTSQICIELGKHMGAQ 145
Score = 64.5 bits (150), Expect = 9e-11
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Frame = +2
Query: 509 GGTNVREDIRQLESG-------VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 667
GGT++++DI +L + VHV+V TPGRV D++ ++ + ++ V+DEAD++LS
Sbjct: 151 GGTSLKDDILRLYNKDIFVHVVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLS 210
Query: 668 RGFKDQIHDVFKMLSADVQVILLSAT 745
FK + + K L + Q++L SAT
Sbjct: 211 MDFKKMLEQIIKHLPENRQILLFSAT 236
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/80 (45%), Positives = 57/80 (71%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GF+KPS IQ+ +I + GRD++A+A++GTGK A + + +L++ DT+ QAL++ PTR
Sbjct: 66 GFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTR 125
Query: 435 ELAQQIQKVVIALGDHLNAK 494
ELA Q ++ I LG H+ A+
Sbjct: 126 ELALQTSQICIELGKHMGAQ 145
Score = 64.5 bits (150), Expect = 9e-11
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Frame = +2
Query: 509 GGTNVREDIRQLESG-------VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 667
GGT++++DI +L + VHV+V TPGRV D++ ++ + ++ V+DEAD++LS
Sbjct: 151 GGTSLKDDILRLYNKDIFVHVVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLS 210
Query: 668 RGFKDQIHDVFKMLSADVQVILLSAT 745
FK + + K L + Q++L SAT
Sbjct: 211 MDFKKMLEQIIKHLPENRQILLFSAT 236
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 74.1 bits (174), Expect = 1e-13
Identities = 40/86 (46%), Positives = 54/86 (62%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFEKPS IQ +AI G D+IAQA+SGTGK FS+ L+ + T Q +I+ PTR
Sbjct: 32 GFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENVITESNCIQIIILTPTR 91
Query: 435 ELAQQIQKVVIALGDHLNAKCHACMV 512
E+A Q++ V+ A+G H + AC V
Sbjct: 92 EIAVQVKDVICAIGCHYDGL--ACKV 115
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/79 (40%), Positives = 53/79 (67%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG ++ ED + L+S H+ VGTPGRV +I ++ L ++++F+LDEAD++L F+ QI
Sbjct: 118 GGISLEEDKKALKS-CHIAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLDESFQQQI 176
Query: 689 HDVFKMLSADVQVILLSAT 745
+ +F L + Q++ SAT
Sbjct: 177 NWIFSALPENKQMMAFSAT 195
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 71.3 bits (167), Expect = 8e-13
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GG IR+LE GV + + TPGR+ DM+ R + VLDEAD ML GF+
Sbjct: 165 CIYGGAPKGPQIRELERGVEICIATPGRLIDMLESRKTNLRRCTYLVLDEADRMLDMGFE 224
Query: 680 DQIHDVFKMLSADVQVILLSAT 745
QI + + D Q ++ SAT
Sbjct: 225 PQIRTIIDQIRPDRQTLMWSAT 246
Score = 34.7 bits (76), Expect = 0.083
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +3
Query: 414 LIMAPTRELAQQIQKVVIALGDH 482
L++ PTRELAQQ+Q+V ++G H
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKH 158
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 65.3 bits (152), Expect = 5e-11
Identities = 33/88 (37%), Positives = 52/88 (59%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ 410
+V + + +G +KP+ IQ + P +QGRD I A++G+GK A F++ ILQ++
Sbjct: 18 LVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDPYGIF 77
Query: 411 ALIMAPTRELAQQIQKVVIALGDHLNAK 494
A+++ PTRELA QI LG + K
Sbjct: 78 AVVLTPTRELAFQIADQFKVLGRPIGLK 105
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQ 685
GG ++ + L + HVV+ TPGR+ D I + L+ I+ VLDEAD +L F D
Sbjct: 111 GGLDMMKQALSLANKPHVVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDD 170
Query: 686 IHDVFKMLSADVQVILLSAT 745
+ +F + Q +L SAT
Sbjct: 171 LKVIFDAVPEKRQTLLFSAT 190
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 64.5 bits (150), Expect = 9e-11
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 497 PCL-HGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG 673
PC+ +GG ++ +R+L+ H++V TPGR+ DM+ R + ++I+ VLDEAD ML G
Sbjct: 956 PCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLDMG 1015
Query: 674 FKDQIHDV 697
F+ QI +
Sbjct: 1016 FEPQIRRI 1023
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/45 (48%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKNATFSISILQQI 386
G++KP+ +Q+ AI P ++G RD++A AQ+G+GK A F I IL +I
Sbjct: 894 GYKKPTPVQKYAI-PIVKGKRDLMACAQTGSGKTAAFLIPILSRI 937
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 64.5 bits (150), Expect = 9e-11
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDV--IAQAQSGTGKNATFSISILQQIDTSIRECQALIMA 425
+GF KPS IQ+ A+ + V IAQ+QSGTGK A F +++L ++D + Q + ++
Sbjct: 121 MGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLTMLSRVDATKPYPQVICLS 180
Query: 426 PTRELAQQIQKVVIALGDH 482
PT ELA+Q KV A+G H
Sbjct: 181 PTYELARQTGKVAEAMGKH 199
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 557 HVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSADVQVI 730
H+++GTPG + D I + + + +FVLDEAD M++ +G +DQ + K L D QV+
Sbjct: 223 HIIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQVL 282
Query: 731 LLSAT 745
L SAT
Sbjct: 283 LFSAT 287
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 64.5 bits (150), Expect = 9e-11
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFE PS +Q I I G D+I QA+SG GK A F ++ LQQ++ + L+M TR
Sbjct: 66 GFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTR 125
Query: 435 ELAQQIQK 458
ELA QI K
Sbjct: 126 ELAFQIHK 133
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 509 GGTNVREDIRQLESGV-HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 670
GG N+++D + L++ H+VVGTPGR+ + + L+ K F+LDE D+ML +
Sbjct: 152 GGINIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHFILDECDKMLEQ 206
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 64.5 bits (150), Expect = 9e-11
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTR 434
GFE PS +Q I I G D+I QA+SG GK A F ++ LQQ++ + L+M TR
Sbjct: 66 GFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTR 125
Query: 435 ELAQQIQK 458
ELA QI K
Sbjct: 126 ELAFQIHK 133
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 509 GGTNVREDIRQLESGV-HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 670
GG N+++D + L++ H+VVGTPGR+ + + L+ K F+LDE D+ML +
Sbjct: 152 GGINIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHFILDECDKMLEQ 206
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +2
Query: 506 HGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 685
+GG +V QLE G H +VGTPGR+ D ++R ++ +I+ +LDEAD ML GF
Sbjct: 587 YGGVSVPYQASQLERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRMLDLGFGPD 646
Query: 686 IHDVFK 703
IH + +
Sbjct: 647 IHKLIE 652
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISIL-----QQIDTSIRECQA 413
R G+ +P+ +Q+ A+ + GRD++A AQ+G+GK A + + +L Q ++ R A
Sbjct: 496 RAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLA 555
Query: 414 LIMAPTRELAQQIQKVVIALGDHLNAKCHAC 506
L +APTRELA+QI DH K C
Sbjct: 556 LCVAPTRELAKQIYIEARKFSDHTPIKVCVC 586
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Frame = +2
Query: 506 HGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 685
+GG +V +RQL+SG +++VGTPGR+ D I + + ++ +LDEAD ML GF+
Sbjct: 823 YGGVSVSHQLRQLQSGCNLLVGTPGRLTDFIEKGKVSLKGLQFLILDEADRMLDMGFEPA 882
Query: 686 IHDVFKML----SADVQVILLSAT 745
I + + + ++ Q ++ SAT
Sbjct: 883 IRRIVESMGMPDKSERQTLMFSAT 906
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 9/74 (12%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI------DTSIREC---Q 410
++KP+ +Q+ +I I GRDV+A AQ+G+GK A F + ++ + +S E Q
Sbjct: 731 YKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQ 790
Query: 411 ALIMAPTRELAQQI 452
A+ +APTRELA QI
Sbjct: 791 AMCIAPTRELANQI 804
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 62.1 bits (144), Expect = 5e-10
Identities = 25/38 (65%), Positives = 35/38 (92%)
Frame = +3
Query: 396 IRECQALIMAPTRELAQQIQKVVIALGDHLNAKCHACM 509
+RE QAL+++PTRELA QIQKVV+ALGD+++ +CHAC+
Sbjct: 1 LREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACI 38
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +2
Query: 479 SLEC*MPCLHGGTNVREDIRQLESGVHVVVGTPGRVY 589
S++C C+ GGTN+ EDIR+L+ G H+V GTPGRV+
Sbjct: 31 SVQC-HACI-GGTNIGEDIRKLDYGQHIVSGTPGRVF 65
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 61.3 bits (142), Expect = 8e-10
Identities = 36/97 (37%), Positives = 61/97 (62%), Gaps = 9/97 (9%)
Frame = +3
Query: 231 IVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISIL---------QQ 383
I+E +LG++ P+ IQ++AI +Q RD+I A++G+GK A F+I +L ++
Sbjct: 112 ILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPLLVWIMGLPKIER 171
Query: 384 IDTSIRECQALIMAPTRELAQQIQKVVIALGDHLNAK 494
+ + + ALI+APTRELAQQI++ ++ G L +
Sbjct: 172 DNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIR 208
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 59.7 bits (138), Expect = 3e-09
Identities = 28/81 (34%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMI--TRRALHANTIKLFVLDEADEMLSRGFKD 682
GG N + + +L+ GV++++ TPGR+ D + T+ L+ N ++ V+DEAD +L GF++
Sbjct: 680 GGVNRKAEAERLQKGVNLLIATPGRLLDHLQNTQGFLYKN-LQCLVIDEADRILEIGFEE 738
Query: 683 QIHDVFKMLSADVQVILLSAT 745
++ + ++L + Q +L SAT
Sbjct: 739 EMRQIIRILPSKRQTVLFSAT 759
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATF---SISILQQIDTSIRE-CQALI 419
+GF + IQ ++I P ++GRD++ A++G+GK F + +L ++ R +I
Sbjct: 590 MGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNGTGVII 649
Query: 420 MAPTRELAQQIQKVVIALGDHLN 488
++PTREL+ Q V L H N
Sbjct: 650 ISPTRELSLQTYGVARDLLKHHN 672
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 59.7 bits (138), Expect = 3e-09
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSR 670
C++GGT + E I +L+ G ++V TPGR+ DM+T R + VLDEAD M
Sbjct: 177 CVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDM 236
Query: 671 GFKDQI 688
GF+ QI
Sbjct: 237 GFEPQI 242
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 222 QRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 344
Q +I++ + +EKP+ IQ +AI + GRD+IA + T
Sbjct: 113 QLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPT 153
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 59.7 bits (138), Expect = 3e-09
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Frame = +3
Query: 225 RRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQ----QIDT 392
+R ++ ++ GF P+ IQ++ I + GRDV+ A++G+GK F I I++ Q T
Sbjct: 59 KRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIETLWRQKWT 118
Query: 393 SIRECQALIMAPTRELAQQIQKVVIALGD 479
S+ AL+++PTRELA Q +V++ +G+
Sbjct: 119 SMDGLGALVISPTRELAYQTFEVLVKIGN 147
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQ 685
GG +++ + +++ ++VV TPGR+ + ++++ VLDEAD +L GF
Sbjct: 158 GGKDLKNEQKRIMK-TNIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPT 216
Query: 686 IHDVFKMLSADVQVILLSAT 745
++ + + L ++ Q +L SAT
Sbjct: 217 LNAIIENLPSERQTLLYSAT 236
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 613
GGTNVRED +LE GVHVVVGTPGRV+DMI R L
Sbjct: 10 GGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVL 44
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Frame = +2
Query: 500 CLHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 679
C++GG + SG+ V+VGTPGR+ D + + L + +K VLDE D ML GF
Sbjct: 178 CIYGGMPYEPQENAINSGLDVLVGTPGRILDFMRQGTLDLSKLKHVVLDEVDRMLDMGFA 237
Query: 680 DQIHDVFKMLSAD-----VQVILLSAT 745
+ + +V A+ Q +L SAT
Sbjct: 238 ESVEEVLAASYAEDREDKPQTLLFSAT 264
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Frame = +3
Query: 309 GRDVIAQAQSGTGKNATFSISILQQI-DTSI-----RECQALIMAPTRELAQQIQKVVIA 470
G DVI QA++GTGK +F++ +++++ D + R + L+MAPTRELA+Q+
Sbjct: 110 GEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFEN 169
Query: 471 LGDHLNAKC 497
L +L C
Sbjct: 170 LKSNLEVYC 178
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +2
Query: 545 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 724
E GV V+V TPGR+ ++I+R+A+ + V+DE D ML GF+ Q+ + + LS Q
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQ 312
Query: 725 VILLSAT 745
+L SAT
Sbjct: 313 TMLFSAT 319
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 350
G+ P+ IQ + + + GRDV+ A +G+GK
Sbjct: 215 GYHSPTPIQMQVLPVLLSGRDVMVCASTGSGK 246
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/62 (43%), Positives = 39/62 (62%)
Frame = +3
Query: 312 RDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAPTRELAQQIQKVVIALGDHLNA 491
+DVI A++G+GK F++ ILQ + + + ALI+ PTRELA QI + ALG +
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGV 61
Query: 492 KC 497
KC
Sbjct: 62 KC 63
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGF--K 679
GG ++ L H+++ TPGR+ D + + T+K V+DEAD +L+ F +
Sbjct: 68 GGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEADRILNMDFEKE 127
Query: 680 DQIHDV 697
D IH V
Sbjct: 128 DYIHRV 133
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = +3
Query: 303 IQGRDVIAQAQSGTGKNATFSISILQQIDTSIRE--CQALIMAPTRELAQQIQKVVIALG 476
+ G+DV+A A++G+GK A F I + +++ T + +ALI++PTRELA Q QK + LG
Sbjct: 316 MDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKELG 375
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 563 VVGTPGRVYDMITRRALHANTIKLFVLDEAD 655
VV TPGR ++ L ++++ V DEAD
Sbjct: 391 VVATPGRFLHVVMEMELKLSSVEYVVFDEAD 421
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 52.0 bits (119), Expect = 5e-07
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQI---DTSIRECQALIM 422
LGF P+ IQ I + G+DV A A +GTGK A F + IL+++ T + L++
Sbjct: 28 LGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAIRVLVI 87
Query: 423 APTRELAQQ 449
PTRELA Q
Sbjct: 88 TPTRELAIQ 96
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/65 (36%), Positives = 33/65 (50%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG N E + L+ G +VV TPGR+ D + +A + + + V DEAD M GF
Sbjct: 626 GGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGFALLF 685
Query: 689 HDVFK 703
FK
Sbjct: 686 SATFK 690
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATF----SISILQQIDTSIRECQ-A 413
+L + +P+ IQ +A+ + GRD+I A++G+GK A F + I+ Q + + +
Sbjct: 534 KLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIV 593
Query: 414 LIMAPTRELAQQI 452
LI APTREL QQI
Sbjct: 594 LICAPTRELCQQI 606
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 49.2 bits (112), Expect = 4e-06
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 23/116 (19%)
Frame = +3
Query: 255 GFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKNATFSISILQQIDT------------- 392
GF KP+ IQ +I P + RD+I A++G+GK F I I+Q I+
Sbjct: 149 GFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDK 208
Query: 393 -SIRECQ-----ALIMAPTRELAQQIQKVVIALGDHLNAKCHAC---MVAPMSVKI 533
S E Q ALIMAPTRELA Q++ ++ + + K A M AP ++
Sbjct: 209 ESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRL 264
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 554 VHVVVGTPGRVYDMITRRALHANTIKLF---VLDEADEMLSRGFKDQIHDVFKML 709
V VVV V +T + H + I+L V+DEAD M+ +G +++ + +++
Sbjct: 313 VAVVVVVVVVVDTSVTNQEKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELI 367
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTI 628
GG + R L+ +VV TPGR++++I++ H +
Sbjct: 254 GGMAAPKQQRLLKQRPEIVVATPGRLWELISQVFTHGKPL 293
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 228 RIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIREC 407
++VE+ ++G KP IQ++A+ + ++ ++++GTGK+ F +L + R
Sbjct: 170 KLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVF---LLPSVQDPGRGY 226
Query: 408 QALIMAPTRELA-QQIQKVVIALGD 479
+I+ PTRELA Q + +V LGD
Sbjct: 227 GTIIVVPTRELASQMLYEVSRLLGD 251
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 512 GTNVREDIRQLESGVH---VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 664
G ++ + L+ +H +V+GTP R+++++ K V+DE D+ L
Sbjct: 261 GVDLSRQEKLLKDSLHPPRIVIGTPKRLWEIVQEHEHLFQRTKRIVIDEVDKTL 314
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +2
Query: 611 LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 724
L +IK+ VLDEADEML++GFK+QI+DV++ L Q
Sbjct: 31 LDTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +2
Query: 554 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 709
V +V GTPG++ D IT + + +K F+LDEAD +L++G D I ++ +
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNKI 187
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQ-----ALIM 422
F+ P+ IQ +++ + GRD+I A++G+GK +S+ + + T ALI+
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALIL 151
Query: 423 APTRELAQQI 452
PTREL QQ+
Sbjct: 152 TPTRELMQQV 161
Score = 38.3 bits (85), Expect = 0.007
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 509 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
GG V L G VVV TPGR+ D+ I V+DE D ML G ++Q+
Sbjct: 203 GGVPVSTQTIALREGADVVVATPGRLLDLY--------KITYLVMDEPDRMLGMGMEEQL 254
Query: 689 HDVFKM---LSADVQVILLSAT 745
+ + S Q +L SAT
Sbjct: 255 RKIVGLATGTSRARQTLLWSAT 276
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 629 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 745
+ VLDEAD M+ GF++ + +F + Q +L SAT
Sbjct: 18 RYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSAT 56
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 629 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 745
+ VLDEAD M+ GF++ + +F + Q +L SAT
Sbjct: 18 RYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSAT 56
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 36.7 bits (81), Expect = 0.021
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Frame = +3
Query: 252 LGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQ---------IDTSIRE 404
L +P+ IQ I I VI AQ+G+GK + ++ + I ++
Sbjct: 396 LNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPLVHRLREDEERHGILARLKR 455
Query: 405 CQALIMAPTRELAQQIQKVVIALGDH 482
+A I+ P RELA QI K +L H
Sbjct: 456 PRACIVVPARELATQILKTAKSLCHH 481
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +2
Query: 503 LHGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 682
L GG + LES V ++V TPG + + L + + V+DEAD M FK
Sbjct: 489 LIGGRKQKWMRDDLESPVDLLVATPGTLLKYRQKDRLFFSDLTHLVIDEADTMFDASFKS 548
Query: 683 QIHDVFKMLSA 715
++ +++
Sbjct: 549 LTMEILHTINS 559
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 626 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 745
+++ VLDEAD ML GF I V L A Q +L SAT
Sbjct: 4 VEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSAT 43
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTS 395
RLG P+++Q+ ++GRDV A G+GK + + I+ QI S
Sbjct: 204 RLGVTVPTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQITES 252
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 34.7 bits (76), Expect = 0.083
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +3
Query: 258 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 350
++KP+ +Q+ +I I GRDV+A AQ+G+GK
Sbjct: 154 YKKPTPVQKYSIPIVIAGRDVMACAQTGSGK 184
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Frame = +2
Query: 560 VVVGTPGRVYDMITRR--ALHANTIKLFVLDEADEMLSR---GFKDQIHDVFKMLS-ADV 721
++V TP R+ ++T+ + + ++ +LDEAD++ GF++QI +++ + D+
Sbjct: 259 ILVTTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDI 318
Query: 722 QVILLSAT 745
L SAT
Sbjct: 319 HRGLFSAT 326
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 408 QALIMAPTRELAQQIQKVVIALGDHLNAKCHACMVAPMSVKIF 536
+A++++PTRELAQQI + L + H A S F
Sbjct: 207 RAVVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTF 249
>SB_2863| Best HMM Match : Asp (HMM E-Value=1.2e-07)
Length = 721
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 617 HEAHDELSYHIHDLECPP---PHEHHSPVGEYLHGHWCHHASMAFS-IQVITKSYHHLLN 450
HE ++Y H+ CP PHEH P+ H H C ++ + ++ S+ H+ N
Sbjct: 657 HENMGPMNYLSHEHMCPMNNVPHEHMGPINNVSHEHMCPMNNVPHEHVCLMNVSHEHVSN 716
>SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 381 QIDTSIRECQALIMAPTRELAQQIQKVVIALGDHLNAKCHACMVAPMSVKIFAN 542
Q D++++E I+ ELA++IQK++ LN K AC+ P V F N
Sbjct: 58 QGDSTLKEPVQKILIIGLELAKEIQKLIDEASSGLNIKHAACL--PSEVPAFCN 109
>SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12)
Length = 769
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 213 HEPQRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQA 332
HEP RRI E H+ LG E + Q+ ++ + + ++A
Sbjct: 468 HEPSRRIGELHVVLGLEDLGPVSQQQLIAASRAQQTESKA 507
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +3
Query: 249 RLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISILQQIDTSIRECQALIMAP 428
+LGF A Q++A+M + G + +G GK+ + + S C L+++P
Sbjct: 519 QLGFSSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRS--PCLTLVISP 576
Query: 429 TRELAQQIQKVVIALGDHLNAKC-HACMVAPMSVKIFAN 542
L ++ + L L C H P +KI +
Sbjct: 577 ---LVSLMEDQITGLPFGLKGACLHNNQTKPQRLKILTD 612
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 533 IRQLESGVHVVVGTPGRVYDMIT 601
I +L+ G ++V TPGR+ DM+T
Sbjct: 1 IAELKRGAEIIVCTPGRMIDMLT 23
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 115 GPSKDQG-SYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRG 243
GP +QG S GPPG PG T W+ + N E LRG
Sbjct: 3363 GPKGEQGRSISGPPG-PPGAPGTSWNDSIVNGGLSNSLLESLRG 3405
>SB_18611| Best HMM Match : IBN_N (HMM E-Value=7.4e-06)
Length = 421
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
Frame = -1
Query: 611 AHDELSYHIHDLECPPPHE-----HHSPVGEYLHG--HWCHHASMAFSIQVITKSYHH 459
+H + H H + P H HH + H CHH M+ S I KS+HH
Sbjct: 224 SHTIIKSHHHQVAPSPSHVIIKSCHHQVMPSSSHTIIKSCHHQVMSSSSHAIIKSHHH 281
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 303 IQGRDVIAQAQSGTGKNATFSISILQQIDTSIRE 404
+ G DV+A + SGT K + F ++++ D+ R+
Sbjct: 245 VNGSDVVANSSSGTVKRSLFLPEVMEENDSVFRD 278
>SB_58994| Best HMM Match : EGF_CA (HMM E-Value=2.3e-29)
Length = 309
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 230 NC*EAYTPRF*KTFCNPAT--RNNALHPRTRCYRSSPVRNWKKCYFLYID 373
NC E +TP C RN L+P CY SSPV CYF +D
Sbjct: 128 NCPEGFTPDVTGLKCTGILPFRNMLLNPYYDCYGSSPV---FMCYFEDMD 174
>SB_39648| Best HMM Match : DUF1110 (HMM E-Value=1.7)
Length = 472
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 548 SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 688
S V ++ G PG V I + +NT + + D D M S D +
Sbjct: 376 SSVDIIDGNPGHVMSTIATDDVTSNTDDIMIEDNPDNMTSNISTDDV 422
>SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0)
Length = 1325
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 533 IRQLESGVHVVVGTPGRVYDMITRRALHA 619
+RQ+ + V TP VYDM TR+ HA
Sbjct: 1129 VRQVNTTAIPRVSTPRHVYDMQTRQLFHA 1157
>SB_48110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +1
Query: 58 PRIESGL*MSEDWPEDSKNGPSKDQGSYDG-----PPGMDPG 168
P ++SGL D DS GP D G G PGMDPG
Sbjct: 231 PGLDSGLDPGIDPGMDSGMGPGMDSGMDPGLDSRLDPGMDPG 272
>SB_14745| Best HMM Match : Histone (HMM E-Value=5.8e-19)
Length = 341
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = -1
Query: 584 HDLECPPPHEHHSPVGEYLH--GHWCHHASMAFSIQ-VITKSYHHL-LNLLGQLSCGSHD 417
H LE +PV +++ GHWCH + Q + T++ + + ++G+L+ +H+
Sbjct: 147 HQLEWTQRTWRTTPVYAHINSNGHWCHRGTSGLGAQPLCTRTSTRMDIGVIGELADLAHN 206
Query: 416 QSLTFTNACID 384
+ N D
Sbjct: 207 PCVFLENVIRD 217
>SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 100 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 231
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 71 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 111
>SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +1
Query: 85 SEDWPEDSKNGPSKDQGSYD---GPPGMDPGTLDTDWDQVVETFDDMNLKEELLRG 243
+E+ E +K + D+G GPPG GT D VVE DD K E G
Sbjct: 22 AEEMRELAKKAEACDRGVRAILLGPPGSGKGTQLVSDDLVVELIDDNLTKPECQNG 77
>SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 569 PPPHEHHSPVGEYLHGHWCHHASMAFSI----QVITKSYHHLLNLL 444
P H HH Y H H HH ++ F+I ++T + +H N++
Sbjct: 225 PQHHYHHHHHNHYSHNH--HHRNIIFTITTTTTIVTITINHHRNII 268
>SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 100 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 231
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 54 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 94
>SB_26279| Best HMM Match : S-antigen (HMM E-Value=3)
Length = 613
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 614 EAHDELSYHIHDLECPPPHEHHSPVGEYLHGHWC 513
E H L++H H +CP E+H+ + + H C
Sbjct: 89 EYHAMLTFHTHFTQCPDFSEYHAMLPFHTHFTQC 122
>SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)
Length = 829
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 252 GVYASQQFFFEVHVIEGFDNLIPVGVKC 169
GVY F H + GF N IP +C
Sbjct: 742 GVYLESNVFQNGHALVGFQNTIPASQEC 769
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,243,137
Number of Sequences: 59808
Number of extensions: 618204
Number of successful extensions: 2624
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 2330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2579
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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