Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00158
(761 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 56 3e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 27 0.25
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.1
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 4.1
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 4.1
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 7.1
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 7.1
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 7.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 9.4
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 56.4 bits (130), Expect = 3e-10
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = +2
Query: 506 HGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 685
+GGT+V +L +G H++V TPGR+ D + + + ++++ VLDEAD ML GF
Sbjct: 308 YGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRMLDMGFLPS 367
Query: 686 IHDVFKMLSADVQVIL 733
I KM+ + V L
Sbjct: 368 IE---KMVDHETMVPL 380
Score = 53.6 bits (123), Expect = 2e-09
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 10/91 (10%)
Frame = +3
Query: 225 RRIVERHIRL-GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISIL-----QQI 386
R IV +I+ G++KP+ +Q+ A+ + GRD++A AQ+G+GK A F++ I+ + +
Sbjct: 204 RNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPIINTLLERSV 263
Query: 387 DTSIR----ECQALIMAPTRELAQQIQKVVI 467
D + E Q +I++PTREL QI + ++
Sbjct: 264 DLVVTSTYCEPQVVIVSPTRELTIQIWQQIV 294
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 26.6 bits (56), Expect = 0.25
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = -1
Query: 608 HDELSYHIHDLECPPPHEHHSPVGEYLHGHWCH--HASMAFSIQVITKSYHH 459
H H H PH HHS H H H+S +IQ+ +HH
Sbjct: 415 HHHTMGHGHSHIHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTPHHH 466
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -1
Query: 614 EAHDELSYHIHDLECPPPHEHHSP 543
+ H L H H L+ +HH P
Sbjct: 139 QRHHHLQNHHHHLQSTAVQDHHRP 162
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 22.6 bits (46), Expect = 4.1
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 679 LETSGQHFISFIKNKKFDGVGMKRTTSYHIIY-TTWSA 569
L+ H I+ I +K F GVG+ S+ I+ W++
Sbjct: 120 LQVFRDHLINQIPDKSFPGVGVIDFESWRPIFRQNWAS 157
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 334 SQELEKMLLSLYRFYNKSIQAFVNV 408
S++ E+++ L+R YNK I+ N+
Sbjct: 24 SEDEERLVRDLFRGYNKLIRPVQNM 48
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +3
Query: 216 EPQRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISI 374
E R E H +E + I + + +QG + +G G+N + I I
Sbjct: 109 EQVRTKEEPHAPYRYEAVAVIHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPI 161
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +3
Query: 216 EPQRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISI 374
E R E H +E + I + + +QG + +G G+N + I I
Sbjct: 109 EQVRTKEEPHAPYRYEAVAVIHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPI 161
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +3
Query: 216 EPQRRIVERHIRLGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKNATFSISI 374
E R E H +E + I + + +QG + +G G+N + I I
Sbjct: 109 EQVRTKEEPHAPYRYEAVAVIHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPI 161
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/18 (38%), Positives = 8/18 (44%)
Frame = -1
Query: 569 PPPHEHHSPVGEYLHGHW 516
PP H HH H H+
Sbjct: 349 PPHHHHHHQTQSLQHLHY 366
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,828
Number of Sequences: 438
Number of extensions: 5793
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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