Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00155
(705 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 126 2e-30
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 125 5e-30
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 107 2e-24
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 88 1e-18
SPBC839.05c |rps1701|rps17-1|40S ribosomal protein S17|Schizosac... 87 2e-18
SPCC24B10.09 |rps1702|rps17-2, rps17|40S ribosomal protein S17|S... 87 2e-18
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 81 2e-16
SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizos... 29 0.86
SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyce... 28 1.5
SPAC1039.04 |||nicotinic acid plasma membrane transporter |Schiz... 27 2.6
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.6
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 27 3.5
SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase |Schiz... 27 3.5
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 26 4.6
SPBC215.08c |arg4||carbamoyl-phosphate synthase Arg4|Schizosacch... 26 4.6
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 25 8.0
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 25 8.0
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 126 bits (305), Expect = 2e-30
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = +3
Query: 513 FTTYSDNQPGVLIQVFEGERAMTKDSNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILN 692
F+TYSDNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILN
Sbjct: 426 FSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILN 485
Query: 693 VSAI 704
VSA+
Sbjct: 486 VSAL 489
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 469 LIKRNTTIPTKQT 507
LIKRNTTIPTK++
Sbjct: 411 LIKRNTTIPTKKS 423
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 125 bits (302), Expect = 5e-30
Identities = 57/64 (89%), Positives = 62/64 (96%)
Frame = +3
Query: 513 FTTYSDNQPGVLIQVFEGERAMTKDSNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILN 692
F+TY+DNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILN
Sbjct: 426 FSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILN 485
Query: 693 VSAI 704
VSA+
Sbjct: 486 VSAL 489
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 469 LIKRNTTIPTKQT 507
LIKRNTTIPTK++
Sbjct: 411 LIKRNTTIPTKKS 423
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 107 bits (256), Expect = 2e-24
Identities = 48/64 (75%), Positives = 57/64 (89%)
Frame = +3
Query: 513 FTTYSDNQPGVLIQVFEGERAMTKDSNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILN 692
F+T DNQ VLIQV+EGER +TKD+NLLGKF+L GIPPAPRGVPQIEVTF++DANG+L
Sbjct: 455 FSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLT 514
Query: 693 VSAI 704
VSA+
Sbjct: 515 VSAV 518
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 88.2 bits (209), Expect = 1e-18
Identities = 38/63 (60%), Positives = 52/63 (82%)
Frame = +3
Query: 513 FTTYSDNQPGVLIQVFEGERAMTKDSNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILN 692
F+T +D Q V I+VF+GER + +D+ L+G F+LTGI PAP+G PQIEV+FD+DA+GI+N
Sbjct: 469 FSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIIN 528
Query: 693 VSA 701
VSA
Sbjct: 529 VSA 531
>SPBC839.05c |rps1701|rps17-1|40S ribosomal protein
S17|Schizosaccharomyces pombe|chr 2|||Manual
Length = 131
Score = 87.0 bits (206), Expect = 2e-18
Identities = 44/81 (54%), Positives = 57/81 (70%)
Frame = -2
Query: 254 GFXTHLMRRLRHSQVRGISIKLQEEERERRYNYVPEVSALEHDIIEVDPDTKDMLKMLDF 75
G+ THLM+R++ VRGIS KLQEEERER+ YVPEVS LE D + VD DTKDMLK L +
Sbjct: 52 GYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEVDRVNVDQDTKDMLKSLGY 111
Query: 74 NNINGLQLTQPATQGGYGGRR 12
+ I +++ PA Q + R+
Sbjct: 112 DQI-PVRVLAPAPQERFRRRQ 131
Score = 58.0 bits (134), Expect = 1e-09
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -3
Query: 358 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIA 254
IEKYY RLTLDF TNKRI +E+AII +K LRNKIA
Sbjct: 17 IEKYYPRLTLDFQTNKRIVDEVAIIASKRLRNKIA 51
>SPCC24B10.09 |rps1702|rps17-2, rps17|40S ribosomal protein
S17|Schizosaccharomyces pombe|chr 3|||Manual
Length = 132
Score = 87.0 bits (206), Expect = 2e-18
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = -2
Query: 254 GFXTHLMRRLRHSQVRGISIKLQEEERERRYNYVPEVSALEHDIIEVDPDTKDMLKMLDF 75
G+ THLM+R++ VRGIS KLQEEERER+ YVPEVS LE D I VD DTKDMLK L +
Sbjct: 52 GYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEKDKINVDQDTKDMLKALGY 111
Query: 74 NNI 66
++I
Sbjct: 112 DSI 114
Score = 58.0 bits (134), Expect = 1e-09
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -3
Query: 358 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIA 254
IEKYY RLTLDF TNKRI +E+AII +K LRNKIA
Sbjct: 17 IEKYYPRLTLDFQTNKRIVDEVAIIASKRLRNKIA 51
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 80.6 bits (190), Expect = 2e-16
Identities = 35/65 (53%), Positives = 48/65 (73%)
Frame = +3
Query: 510 TFTTYSDNQPGVLIQVFEGERAMTKDSNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIL 689
TFTT +DNQ V V++GER ++ LG+F+LTGIPP PRG ++E TF++DANGIL
Sbjct: 430 TFTTVADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGIL 489
Query: 690 NVSAI 704
V+A+
Sbjct: 490 KVTAV 494
>SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 28.7 bits (61), Expect = 0.86
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 394 GHDPWLKLYSAAFDRITGAEFGTSTLIKRNTTIPTKQTRHSPPTLITNPEYS 549
G D WLKL+ +AF + G TS + T + TR+ L ++ +S
Sbjct: 146 GDDTWLKLFPSAFSKFEGT---TSFFVSDYTEVDNNVTRNFDHALPSSLSHS 194
>SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 54 LQAINIVEVQHLQHILGVGVYFDDVMFESRHFWDIVVTPLTLLFL-KFDR-DSSHL 215
L+ NI+E +++ + +YF+ M + +FW I P +L KF + ++SHL
Sbjct: 368 LEVKNIIEQRNVTTMENCNLYFNPEMPTTIYFWKIYSAPTWMLARPKFSQINTSHL 423
>SPAC1039.04 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 270 RGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFL 380
RG+V + AIS+ ++ F+ S++++ + + FA FL
Sbjct: 352 RGIVLIAAISTTMIGFIVYGSIDIMNHIGVSYFACFL 388
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -3
Query: 697 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 560
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 218 SQVRGISIKLQEEERERRYNYVPEV 144
S V ISIK QEEER+R+ E+
Sbjct: 351 SHVDSISIKAQEEERKRQAEIEKEI 375
>SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 499
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 494 GMVVLRLMSVLVPNSAPVILSKAALYNFSHGS 399
G+ V R + V NS+ + L + LYN HGS
Sbjct: 375 GIRVSRPRFISVKNSSDLFLVRCDLYNVDHGS 406
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 233 RRLRHSQVRGISIKLQEEERERRYNYVPEVS 141
R+ S+ R S KL EEER+RR +V +++
Sbjct: 218 RKRSRSRPRERSSKLSEEERDRRTVFVSQLA 248
>SPBC215.08c |arg4||carbamoyl-phosphate synthase
Arg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1160
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 90 QHILGVGVYFDDVMFESRHFWDIVVTPLTLLFLKFDRD 203
Q L VG+ DD+ +R+ ++ TP++ L DRD
Sbjct: 172 QTALNVGIQLDDMGVFARNHVKVLGTPISTLKTSEDRD 209
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 375 FLTVLVRTRPMAEVVQRCF 431
F T L R P++E+V RCF
Sbjct: 413 FKTSLYRDHPVSEIVGRCF 431
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 262 KIADLXPI**GVSDTRKCEESLSNFRKRS 176
KI ++ P + DT+ EE + NF+K S
Sbjct: 498 KIKNIVPFYVDIDDTKTTEEYIINFKKNS 526
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,769,318
Number of Sequences: 5004
Number of extensions: 54974
Number of successful extensions: 193
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 327172622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -