Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00153
(798 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 146 1e-35
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 145 3e-35
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 144 5e-35
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 54 8e-08
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 54 1e-07
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 53 2e-07
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 52 3e-07
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 50 1e-06
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 50 2e-06
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 50 2e-06
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 49 4e-06
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 49 4e-06
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 49 4e-06
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 49 4e-06
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 48 5e-06
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 48 7e-06
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 48 1e-05
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 48 1e-05
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 47 1e-05
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 47 1e-05
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 47 1e-05
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 47 1e-05
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 47 1e-05
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 47 1e-05
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 46 2e-05
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 46 2e-05
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 46 3e-05
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 46 3e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 46 3e-05
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 46 4e-05
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 46 4e-05
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 45 5e-05
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 45 5e-05
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 45 5e-05
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 45 5e-05
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 45 5e-05
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 45 5e-05
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 45 5e-05
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 45 7e-05
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 44 9e-05
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 44 9e-05
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 44 1e-04
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 44 1e-04
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 44 1e-04
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 44 1e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 44 2e-04
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 44 2e-04
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 44 2e-04
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 43 2e-04
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 43 2e-04
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 43 2e-04
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 43 2e-04
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 43 3e-04
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 43 3e-04
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 43 3e-04
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 42 4e-04
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 42 4e-04
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 42 4e-04
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 42 4e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 42 4e-04
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 42 5e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 42 5e-04
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 42 5e-04
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 42 6e-04
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 41 8e-04
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 41 8e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 40 0.001
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 40 0.001
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 40 0.002
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 40 0.002
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 40 0.003
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 40 0.003
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 40 0.003
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 39 0.003
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 39 0.003
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 39 0.003
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 39 0.003
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 39 0.003
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 39 0.003
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 39 0.003
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 39 0.003
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 39 0.003
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 39 0.004
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 39 0.004
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 39 0.004
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 39 0.004
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 38 0.006
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 38 0.006
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 38 0.006
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 38 0.008
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 38 0.008
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 38 0.008
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 38 0.008
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 38 0.008
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 38 0.010
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 38 0.010
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 37 0.013
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 37 0.013
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 37 0.013
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 37 0.013
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 37 0.013
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 37 0.018
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 36 0.024
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 36 0.024
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 36 0.024
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 36 0.031
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 36 0.031
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 36 0.031
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 36 0.031
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 36 0.041
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.041
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 36 0.041
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 36 0.041
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 35 0.054
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 35 0.054
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 35 0.054
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 35 0.054
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 35 0.054
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 35 0.054
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 35 0.054
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 35 0.072
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 35 0.072
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 34 0.095
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 34 0.095
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 34 0.095
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.095
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.095
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.095
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 34 0.13
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 34 0.13
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 34 0.13
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 34 0.13
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 33 0.17
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 33 0.17
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 33 0.17
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 33 0.22
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 33 0.22
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 33 0.22
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 33 0.22
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 33 0.22
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.22
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.22
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 33 0.29
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 33 0.29
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 33 0.29
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 33 0.29
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 33 0.29
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 32 0.38
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 32 0.38
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 32 0.38
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 32 0.38
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 32 0.38
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 32 0.38
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 32 0.38
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 32 0.38
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 32 0.38
At4g39753.1 68417.m05629 kelch repeat-containing F-box family pr... 32 0.51
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.51
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 32 0.51
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 31 0.67
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 31 0.67
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 31 0.67
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 31 0.67
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 31 0.67
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 31 0.67
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 31 0.89
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 31 0.89
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 31 0.89
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 31 1.2
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 31 1.2
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 31 1.2
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 31 1.2
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 30 1.5
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 30 1.5
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 30 1.5
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 30 1.5
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 30 1.5
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.5
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 30 1.5
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 30 1.5
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 30 2.0
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 30 2.0
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 30 2.0
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 30 2.0
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 29 2.7
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 29 2.7
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 29 2.7
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 29 2.7
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 29 2.7
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 29 2.7
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 29 2.7
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 29 3.6
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 29 3.6
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 29 4.7
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 29 4.7
At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR ... 29 4.7
At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR ... 29 4.7
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 6.2
At5g13850.1 68418.m01619 nascent polypeptide-associated complex ... 28 6.2
At5g08250.1 68418.m00969 cytochrome P450 family protein contains... 28 6.2
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 28 6.2
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 28 6.2
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 28 6.2
At3g12390.1 68416.m01544 nascent polypeptide associated complex ... 28 6.2
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 28 6.2
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 28 8.3
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 28 8.3
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 28 8.3
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 28 8.3
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 28 8.3
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 28 8.3
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 146 bits (354), Expect = 1e-35
Identities = 66/88 (75%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD- 425
+ RLWDLA G+TTRRF HTKDVLSVAFS DNRQIVS SRD+TIKLWNTL ECKYTI +
Sbjct: 86 ELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEG 145
Query: 426 DGHSDWVSCVRFSPNHANPIIVSCGWDR 509
DGH +WVSCVRFSPN P IVS WD+
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Score = 109 bits (261), Expect = 3e-24
Identities = 48/82 (58%), Positives = 64/82 (78%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL GH
Sbjct: 3 EGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGH 62
Query: 181 SHFISDVVLSSDGNYALSGSWD 246
SHF+ DVVLSSDG +ALSGSWD
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWD 84
Score = 108 bits (260), Expect = 4e-24
Identities = 48/72 (66%), Positives = 59/72 (81%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+TVKVW+L NCKL+ + +GHSGYLNTV VSPDGSLCASGGKD +LWDL +GK L++L+
Sbjct: 173 KTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Query: 686 HNDIITALCFSP 721
II +LCFSP
Sbjct: 233 AGSIIHSLCFSP 244
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 31 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNSLVGHSGYLNTVAV 201
Query: 208 SSDGNYALSGSWD 246
S DG+ SG D
Sbjct: 202 SPDGSLCASGGKD 214
Score = 38.7 bits (86), Expect = 0.004
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +3
Query: 255 RLWD-LAAGK-TTRRFEDHTKDVLSVAFSVDNR--QIVSGSRDKTIKLWNTLAECKYTIQ 422
+LW+ L K T + H + V V FS + IVS S DKT+K+WN L CK
Sbjct: 130 KLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN-LQNCKLRNS 188
Query: 423 DDGHSDWVSCVRFSPN 470
GHS +++ V SP+
Sbjct: 189 LVGHSGYLNTVAVSPD 204
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/82 (36%), Positives = 41/82 (50%)
Frame = +3
Query: 264 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 443
D + G RR H+ V V S D + +SGS D ++LW+ LA + T + GH+
Sbjct: 49 DKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD-LATGETTRRFVGHTKD 107
Query: 444 VSCVRFSPNHANPIIVSCGWDR 509
V V FS + N IVS DR
Sbjct: 108 VLSVAFSTD--NRQIVSASRDR 127
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFS 718
GHS ++ V +S DG SG D + LWDL G+ + H + ++ FS
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFS 114
Score = 34.7 bits (76), Expect = 0.072
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 156
+ KLR +L GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 34.3 bits (75), Expect = 0.095
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFSP 467
HT V ++A +DN I V+ SRDK+I LW + K Y + GHS +V V S
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS 73
Query: 468 NHANPIIVSCGWD 506
+ +S WD
Sbjct: 74 D--GQFALSGSWD 84
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GH+ +V + + LS S D L +W L E +R GH+ + V
Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLATGETT-----RRFVGHTKDVLSVA 112
Query: 205 LSSDGNYALSGSWDKT 252
S+D +S S D+T
Sbjct: 113 FSTDNRQIVSASRDRT 128
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDG--NYALSGSWDKT 252
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGD--GHKEWVSCVRFSPNTLVPTIVSASWDKT 174
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 700 HCLVLLTNRYWLCAAFGPSIKSGIW 774
H L NRYWLCAA SI+ IW
Sbjct: 238 HSLCFSPNRYWLCAATENSIR--IW 260
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 497 WLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD-LNDGKHL 673
W G+ +++W L + +GH+ + +V S D S +D LW+ L + K+
Sbjct: 83 WDGE-LRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYT 141
Query: 674 HTL--DHNDIITALCFSP 721
+ H + ++ + FSP
Sbjct: 142 ISEGDGHKEWVSCVRFSP 159
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 145 bits (352), Expect = 3e-35
Identities = 66/89 (74%), Positives = 73/89 (82%), Gaps = 2/89 (2%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD- 425
+ RLWDLAAG +TRRF HTKDVLSVAFS+DNRQIVS SRD+TIKLWNTL ECKYTI +
Sbjct: 86 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEG 145
Query: 426 -DGHSDWVSCVRFSPNHANPIIVSCGWDR 509
+GH DWVSCVRFSPN P IVS WD+
Sbjct: 146 GEGHRDWVSCVRFSPNTLQPTIVSASWDK 174
Score = 112 bits (269), Expect = 3e-25
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL GH
Sbjct: 3 EGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH 62
Query: 181 SHFISDVVLSSDGNYALSGSWD 246
SHF+ DVVLSSDG +ALSGSWD
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWD 84
Score = 107 bits (258), Expect = 6e-24
Identities = 46/72 (63%), Positives = 59/72 (81%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+TVKVW+L+NCKL+ GH+GY++TV VSPDGSLCASGGKD +LWDL +GK L++L+
Sbjct: 174 KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE 233
Query: 686 HNDIITALCFSP 721
N +I ALCFSP
Sbjct: 234 ANSVIHALCFSP 245
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 470
E H V V FS + Q IVS S DKT+K+WN L+ CK GH+ +VS V SP+
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN-LSNCKLRSTLAGHTGYVSTVAVSPD 205
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 31 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
GH WV+ + +P I+S+S DKT+ VW L+ + + L GH+ ++S V +
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL-----RSTLAGHTGYVSTVAV 202
Query: 208 SSDGNYALSGSWD 246
S DG+ SG D
Sbjct: 203 SPDGSLCASGGKD 215
Score = 37.5 bits (83), Expect = 0.010
Identities = 31/82 (37%), Positives = 40/82 (48%)
Frame = +3
Query: 264 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 443
D A G RR H+ V V S D + +SGS D ++LW+ LA T + GH+
Sbjct: 49 DKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD-LAAGVSTRRFVGHTKD 107
Query: 444 VSCVRFSPNHANPIIVSCGWDR 509
V V FS + N IVS DR
Sbjct: 108 VLSVAFSLD--NRQIVSASRDR 127
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 156
KLR TL GH G+V+ +A +P + S +D +++W L + Y +
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSL 232
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++W+L+ K HT V +VA S D SG +D + LW+ LAE K + +
Sbjct: 177 KVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD-LAEGKKLYSLEAN 235
Query: 435 SDWVSCVRFSPN 470
S + + FSPN
Sbjct: 236 S-VIHALCFSPN 246
Score = 35.5 bits (78), Expect = 0.041
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFSP 467
HT V ++A +DN I VS SRDK+I LW + K Y + GHS +V V S
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS 73
Query: 468 NHANPIIVSCGWD 506
+ +S WD
Sbjct: 74 D--GQFALSGSWD 84
Score = 34.7 bits (76), Expect = 0.072
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFS 718
GHS ++ V +S DG SG D + LWDL G + H + ++ FS
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFS 114
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GH+ +V + + LS S D L +W L G+ +R GH+ + V
Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLAA-----GVSTRRFVGHTKDVLSVA 112
Query: 205 LSSDGNYALSGSWDKT 252
S D +S S D+T
Sbjct: 113 FSLDNRQIVSASRDRT 128
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD--GNYALSGSWDKT 252
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGG-EGHRDWVSCVRFSPNTLQPTIVSASWDKT 175
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +1
Query: 700 HCLVLLTNRYWLCAAFGPSIKSGIW 774
H L NRYWLCAA IK IW
Sbjct: 239 HALCFSPNRYWLCAATEHGIK--IW 261
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 144 bits (350), Expect = 5e-35
Identities = 65/88 (73%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD- 425
+ RLWDLA G++TRRF HTKDVLSVAFS DNRQIVS SRD+TIKLWNTL ECKYTI +
Sbjct: 86 ELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEA 145
Query: 426 DGHSDWVSCVRFSPNHANPIIVSCGWDR 509
DGH +WVSCVRFSPN P IVS WD+
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Score = 108 bits (259), Expect = 5e-24
Identities = 47/82 (57%), Positives = 64/82 (78%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+ GH
Sbjct: 3 EGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGH 62
Query: 181 SHFISDVVLSSDGNYALSGSWD 246
SHF+ DVVLSSDG +ALSGSWD
Sbjct: 63 SHFVQDVVLSSDGQFALSGSWD 84
Score = 107 bits (257), Expect = 8e-24
Identities = 48/72 (66%), Positives = 57/72 (79%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+TVKVW+L NCKL+ GHSGYLNTV VSPDGSLCASGGKD +LWDL +GK L++L+
Sbjct: 173 KTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Query: 686 HNDIITALCFSP 721
II +LCFSP
Sbjct: 233 AGSIIHSLCFSP 244
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 31 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNTLAGHSGYLNTVAV 201
Query: 208 SSDGNYALSGSWD 246
S DG+ SG D
Sbjct: 202 SPDGSLCASGGKD 214
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +3
Query: 255 RLWD-LAAGK-TTRRFEDHTKDVLSVAFSVDNR--QIVSGSRDKTIKLWNTLAECKYTIQ 422
+LW+ L K T + H + V V FS + IVS S DKT+K+WN L CK
Sbjct: 130 KLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN-LQNCKLRNT 188
Query: 423 DDGHSDWVSCVRFSPN 470
GHS +++ V SP+
Sbjct: 189 LAGHSGYLNTVAVSPD 204
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/82 (36%), Positives = 41/82 (50%)
Frame = +3
Query: 264 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 443
D + G RR H+ V V S D + +SGS D ++LW+ LA + T + GH+
Sbjct: 49 DKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWD-LATGESTRRFVGHTKD 107
Query: 444 VSCVRFSPNHANPIIVSCGWDR 509
V V FS + N IVS DR
Sbjct: 108 VLSVAFSTD--NRQIVSASRDR 127
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 156
+ KLR TL GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFS 718
GHS ++ V +S DG SG D + LWDL G+ + H + ++ FS
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFS 114
Score = 35.9 bits (79), Expect = 0.031
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCVRFSP 467
HT V ++A VDN IV+ SRDK+I LW E K Y + GHS +V V S
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 468 NHANPIIVSCGWD 506
+ +S WD
Sbjct: 74 D--GQFALSGSWD 84
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDG--NYALSGSWDKT 252
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEAD--GHKEWVSCVRFSPNTLVPTIVSASWDKT 174
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
+ GH+ +V + + LS S D L +W L E+ +R GH+ + V
Sbjct: 59 MTGHSHFVQDVVLSSD-GQFALSGSWDGELRLWDLATGEST-----RRFVGHTKDVLSVA 112
Query: 205 LSSDGNYALSGSWDKT 252
S+D +S S D+T
Sbjct: 113 FSTDNRQIVSASRDRT 128
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +2
Query: 497 WLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD-LNDGKH- 670
W G+ +++W L + +GH+ + +V S D S +D LW+ L + K+
Sbjct: 83 WDGE-LRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYT 141
Query: 671 LHTLD-HNDIITALCFSP 721
+ D H + ++ + FSP
Sbjct: 142 ISEADGHKEWVSCVRFSP 159
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 700 HCLVLLTNRYWLCAAFGPSIKSGIW 774
H L NRYWLCAA SI+ IW
Sbjct: 238 HSLCFSPNRYWLCAATENSIR--IW 260
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 54.4 bits (125), Expect = 8e-08
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DG 431
RLW+ G+ F H V V++S D+R ++SGS+D T+K+W K QD G
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE--IRTKKLKQDLPG 442
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H+D V V +SP+ +VS G DR+
Sbjct: 443 HADEVFAVDWSPDGEK--VVSGGKDRV 467
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPN 470
H + VL V+FS D +Q+ SGS D T++LW+ E +T + GH +WV V +SP+
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCK--GHKNWVLTVAWSPD 162
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
RLWDL + H VL+VA+S D + +VSGS+ I WN GH
Sbjct: 134 RLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGH 193
Query: 435 SDWVSCVRFSPNH 473
W++ + + P H
Sbjct: 194 KKWITGISWEPVH 206
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
D R+WD+ K+ HT V V + D I +GS+D TIK+W T + K +
Sbjct: 222 DARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWET-TQGKLIRELK 279
Query: 429 GHSDWVSCVRFSPNH 473
GH W++ + S +
Sbjct: 280 GHGHWINSLALSTEY 294
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 649
T+K+W + KLK + GH+ + V SPDG SGGKD LW
Sbjct: 425 TLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 42.3 bits (95), Expect(2) = 2e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 76 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKT 252
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S DG + S S+DK+
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDGKWIASASFDKS 383
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
++W++ K + H +V +V +S D ++VSG +D+ +KLW
Sbjct: 427 KIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 721
GH+ + V+ SPDG ASG D LWDL L T H + + + +SP
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSP 161
Score = 36.3 bits (80), Expect = 0.024
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
RGH G V Q++ + ++LS S+D TL +W++ + +P GH+ + V
Sbjct: 399 RGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP-----GHADEVFAVDW 452
Query: 208 SSDGNYALSGSWDK 249
S DG +SG D+
Sbjct: 453 SPDGEKVVSGGKDR 466
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 LWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
LW+ + K + R H + V V FS D + I S S DK+++LWN
Sbjct: 343 LWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 34.7 bits (76), Expect = 0.072
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL- 682
++V++W+ + GH G + V+ S D L SG KD +W++ K L
Sbjct: 382 KSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLP 441
Query: 683 DHNDIITALCFSP 721
H D + A+ +SP
Sbjct: 442 GHADEVFAVDWSP 454
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 667
TV++W L GH ++ TV SPDG SG K + W+ G+
Sbjct: 132 TVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGE 184
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 201
T+ GH V ++ +P + S S D T+ +W L + P GH +++ V
Sbjct: 104 TIAGHAEAVLCVSFSPD-GKQLASGSGDTTVRLWDLYTET-----PLFTCKGHKNWVLTV 157
Query: 202 VLSSDGNYALSGSWDKTFVC 261
S DG + +SGS C
Sbjct: 158 AWSPDGKHLVSGSKSGEICC 177
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +1
Query: 82 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL-SGSWDKT 252
+I + S+D T+ +W+ T+ G + L GH H+I+ + LS++ Y L +G++D T
Sbjct: 254 IIYTGSQDCTIKMWETTQ-----GKLIRELKGHGHWINSLALSTE--YVLRTGAFDHT 304
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
T+ +W + K L GH +N V SPDG AS D LW+
Sbjct: 340 TMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 23.4 bits (48), Expect(2) = 2e-05
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKY 75
KL L+GH W+ +A + +Y
Sbjct: 273 KLIRELKGHGHWINSLALSTEY 294
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
+LWD G RF++H V V F VSG D IK+WN C +T+ G
Sbjct: 34 QLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLL--G 91
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H D++ V+F +H NP IVS D+ R
Sbjct: 92 HLDYIRTVQF--HHENPWIVSASDDQTIR 118
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +3
Query: 243 GQDFRL--WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
G D+++ W+ + H + +V F +N IVS S D+TI++WN + +
Sbjct: 70 GDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCIS 129
Query: 417 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
+ GH+ +V C F P ++VS D+ R
Sbjct: 130 VL-TGHNHYVMCASFHPK--EDLVVSASLDQTVR 160
Score = 34.3 bits (75), Expect = 0.095
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 205 LSSDG--NYALSG 237
D Y L G
Sbjct: 190 GGVDAIVKYVLEG 202
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 243 TLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
+KVW+ + LGH Y+ TV + S D +W+ + L H
Sbjct: 75 IKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
Query: 689 NDIITALCFSPTD 727
N + F P +
Sbjct: 135 NHYVMCASFHPKE 147
Score = 30.7 bits (66), Expect = 1.2
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRFSPN 470
E H + V +F IVSG+ D+ +KLW + E K D GH + VS V F
Sbjct: 201 EGHDRGVNWASFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMF--- 256
Query: 471 HA-NPIIVSCG-------WDRLSRSGI 527
HA IIVS WD R+GI
Sbjct: 257 HAKQDIIVSNSEDKSIRVWDATKRTGI 283
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
QT+++W+ + GH+ Y+ + P L S D +WD+
Sbjct: 115 QTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
Q R+W+ + H V+ +F +VS S D+T+++W+
Sbjct: 115 QTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
+LWD+ G + HT V F+ + IVSGS D+T+++W+ T +C +
Sbjct: 96 KLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVL--PA 153
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
HSD V+ V F N +IVS +D L R
Sbjct: 154 HSDPVTAVDF--NRDGSLIVSSSYDGLCR 180
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDG 431
R+WD+ GK + H+ V +V F+ D IVS S D ++W++ C T+ DD
Sbjct: 138 RIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDE 197
Query: 432 HSDWVSCVRFSPN 470
+ VS VRFSPN
Sbjct: 198 NPP-VSFVRFSPN 209
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFS 464
+ F H + VAFS D R IVS S DKT+KLW+ E I+ GH+++ CV F+
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWD--VETGSLIKTLIGHTNYAFCVNFN 122
Query: 465 PNHANPIIVSCGWDRLSR 518
P + +IVS +D R
Sbjct: 123 PQ--SNMIVSGSFDETVR 138
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+T+K+W + L +GH+ Y V +P ++ SG D +WD+ GK L L
Sbjct: 93 KTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLP 152
Query: 686 -HNDIITALCFS 718
H+D +TA+ F+
Sbjct: 153 AHSDPVTAVDFN 164
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 201
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 202 VLSSDGNYALSGSWDKT 252
SSD + +S S DKT
Sbjct: 78 AFSSDARFIVSASDDKT 94
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 404
+W+L + K ++ E HT+ V++VA I SGS DKT+++W E
Sbjct: 269 MWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTRRFEDHTKD--VLSVAFSVDN-RQIVSGSRDKTIKLWNTLAECK 410
L RLW++++ K + + H +S AFSV N ++IVSGS D + +W L K
Sbjct: 218 LDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE-LNSKK 276
Query: 411 YTIQDDGHSDWVSCVRFSP 467
+ +GH++ V V P
Sbjct: 277 LLQKLEGHTETVMNVACHP 295
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL- 682
+TV++W +T K HS + V + DGSL S D +WD G + TL
Sbjct: 135 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 683 -DHNDIITALCFSP 721
D N ++ + FSP
Sbjct: 195 DDENPPVSFVRFSP 208
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
ET L TL GH + + NP+ +MI+S S D+T+ +W +T G K L H
Sbjct: 101 ETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVTT-----GKCLKVLPAH 154
Query: 181 SHFISDVVLSSDGNYALSGSWD 246
S ++ V + DG+ +S S+D
Sbjct: 155 SDPVTAVDFNRDGSLIVSSSYD 176
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGH--SGY-LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 670
L T+++W++++ K + GH + Y +++ +G SG +D +W+LN K
Sbjct: 218 LDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKL 277
Query: 671 LHTLD-HNDIITALCFSPTD 727
L L+ H + + + PT+
Sbjct: 278 LQKLEGHTETVMNVACHPTE 297
Score = 35.1 bits (77), Expect = 0.054
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 210
GH ++ +A + I+S+S DKTL +W + G K L GH+++ V +
Sbjct: 69 GHENGISDVAFSSD-ARFIVSASDDKTLKLWDVET-----GSLIKTLIGHTNYAFCVNFN 122
Query: 211 SDGNYALSGSWDKT 252
N +SGS+D+T
Sbjct: 123 PQSNMIVSGSFDET 136
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 721
GH ++ V S D S D LWD+ G + TL H + + F+P
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 85 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKT 252
I+S S D + +W+L N+ + QK L GH+ + +V N SGS DKT
Sbjct: 258 IVSGSEDNCVHMWEL----NSKKLLQK-LEGHTETVMNVACHPTENLIASGSLDKT 308
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 649
V +W L + KL GH+ + V P +L ASG D +W
Sbjct: 267 VHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQ 422
+ R+W++ GK R + H+ + SV F+ D IVS S D + K+W+ C T+
Sbjct: 150 ETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLI 209
Query: 423 DDGHSDWVSCVRFSPN 470
DD S VS +FSPN
Sbjct: 210 DD-KSPAVSFAKFSPN 224
Score = 48.0 bits (109), Expect = 7e-06
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA--ECKYTIQDDG 431
LW R+E H+ + +A+S D+ S S D T+++W+ + EC ++ G
Sbjct: 69 LWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLR--G 126
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H+++V CV F+P + +IVS +D R
Sbjct: 127 HTNFVFCVNFNP--PSNLIVSGSFDETIR 153
Score = 44.8 bits (101), Expect = 7e-05
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 201
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 202 VLSSDGNYALSGSWDKTFVCGISL-QARLPDDSRTILR 312
SSD +Y S S D C + + AR P + +LR
Sbjct: 92 AWSSDSHYTCSASDD----CTLRIWDARSPYECLKVLR 125
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 RLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDD 428
R+WD + + + HT V V F+ + IVSGS D+TI++W +C I+
Sbjct: 110 RIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIK-- 167
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWD 506
HS +S V F N +IVS D
Sbjct: 168 AHSMPISSVHF--NRDGSLIVSASHD 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL- 682
+T+++W + K HS +++V + DGSL S D +WD +G L TL
Sbjct: 150 ETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLI 209
Query: 683 -DHNDIITALCFSP 721
D + ++ FSP
Sbjct: 210 DDKSPAVSFAKFSP 223
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDN-RQIVSGSRDKTIKLWNTLAECK 410
L +L + A GK + + HT V + AFSV N + IVSGS D + LW+ A
Sbjct: 233 LDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQAR-N 291
Query: 411 YTIQDDGHSDWVSCVRFSP 467
+ +GH+D V V P
Sbjct: 292 ILQRLEGHTDAVISVSCHP 310
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSGSR-DKTIKLW 389
LWDL A +R E HT V+SV+ V N SG+ DKTI++W
Sbjct: 284 LWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 464
+ E HT + V FS D + S S DKT+ LW+ + +GHS +S + +S
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSA-TNYSLIHRYEGHSSGISDLAWS 94
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPTDTGY 736
GH+ ++ V S DG+L AS D +LW + +H + H+ I+ L +S +D+ Y
Sbjct: 41 GHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWS-SDSHY 99
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 163 KRLYGHSHFISDVVLSSDGNYALSGSWDKTFV 258
K L GH+ IS V S+DGN S S DKT +
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMI 68
Score = 31.5 bits (68), Expect = 0.67
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 461 LTQSCQPHY-CILWLGQTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDM 634
L S HY C T+++W + + L GH+ ++ V +P +L SG D
Sbjct: 91 LAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDE 150
Query: 635 KAMLWDLNDGKHLHTLD-HNDIITALCFS 718
+W++ GK + + H+ I+++ F+
Sbjct: 151 TIRIWEVKTGKCVRMIKAHSMPISSVHFN 179
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG-KHLHTL 682
+T+ +W TN L + GHS ++ + S D S D +WD + L L
Sbjct: 65 KTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVL 124
Query: 683 -DHNDIITALCFSP 721
H + + + F+P
Sbjct: 125 RGHTNFVFCVNFNP 138
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 210
GH+ ++ +A + S+S D TL +W D + K L GH++F+ V +
Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIW----DARSPYECLKVLRGHTNFVFCVNFN 137
Query: 211 SDGNYALSGSWDKT 252
N +SGS+D+T
Sbjct: 138 PPSNLIVSGSFDET 151
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 479
HT DVL +A+S D+ ++S S+DKT++LW T C + H+++V+CV F+P + N
Sbjct: 271 HTGDVLDLAWS-DSNLLLSASKDKTVRLWRT--GCDQCLHVFHHNNYVTCVEFNPVNKN 326
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+TV++W T C ++ H+ Y+ V +P + + ASG D KA +W L++ + +
Sbjct: 293 KTVRLWR-TGCDQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLSEERVVAWT 351
Query: 683 DHNDIITALCFSPTDTGYV 739
D D I+A+ + P G+V
Sbjct: 352 DVRDSISAISYQPNGNGFV 370
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPTD 727
GH+G + + S D +L S KD LW + LH HN+ +T + F+P +
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFHHNNYVTCVEFNPVN 324
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 545 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 649
KIN GH G + T+ SPDG A+GG+D +W
Sbjct: 193 KIN--GHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GH G V +A + +++LS+S+DKT+ +W+ D+ + ++ H+++++ V
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQCLH------VFHHNNYVTCVE 319
Query: 205 LS--SDGNYALSGSWD-KTFVCGIS 270
+ + N+A SGS D K + G+S
Sbjct: 320 FNPVNKNNFA-SGSIDGKARIWGLS 343
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/58 (37%), Positives = 40/58 (68%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
F+ H DVL +A+S ++ ++S S DKT++LWN ++ ++ HSD+V+C++F+P
Sbjct: 509 FQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQT--CLKVFSHSDYVTCIQFNP 563
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +2
Query: 461 LTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMK 637
L S H + +TV++W+L++ + + HS Y+ + +P D SG D K
Sbjct: 519 LAWSKSQHLLSSSMDKTVRLWNLSS-QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAK 577
Query: 638 AMLWDLNDGKHLHTLDHNDIITALCFSPTDTG 733
+W + D + + D ++++T+ C++P G
Sbjct: 578 VRVWSIPDRQVVDWYDLHEMVTSACYTPDGQG 609
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 392
RLW+L++ +T + H+ V + F+ VD+R +SGS D +++W+
Sbjct: 537 RLWNLSS-QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWS 582
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 617 SGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPTDTGY 736
S D LW+L+ L H+D +T + F+P D Y
Sbjct: 529 SSSMDKTVRLWNLSSQTCLKVFSHSDYVTCIQFNPVDDRY 568
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 85 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWD 246
+LSSS DKT+ +W L+ +++ HS +++ + + D Y +SGS D
Sbjct: 527 LLSSSMDKTVRLWNLSSQ------TCLKVFSHSDYVTCIQFNPVDDRYFISGSLD 575
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
+LWD G RF++H V V F VSG D IK+WN C +T+ G
Sbjct: 34 QLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLL--G 91
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H D++ V+F +H P IVS D+ R
Sbjct: 92 HLDYIRTVQF--HHEYPWIVSASDDQTIR 118
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +3
Query: 243 GQDFRL--WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
G D+++ W+ + H + +V F + IVS S D+TI++WN + +
Sbjct: 70 GDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVS 129
Query: 417 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
+ GH+ +V C F P ++VS D+ R
Sbjct: 130 VL-TGHNHYVMCASFHPK--EDLVVSASLDQTVR 160
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
+KVW+ N + LGH Y+ TV + S D +W+ + L H
Sbjct: 75 IKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGH 134
Query: 689 NDIITALCFSPTD 727
N + F P +
Sbjct: 135 NHYVMCASFHPKE 147
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 243 TLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 129
L GHN +V + +PK D+++S+S D+T+ VW +
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI 164
Score = 31.1 bits (67), Expect = 0.89
Identities = 30/77 (38%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRFSPN 470
E H + V AF IVSG+ D+ +KLW + E K D GH + VS V F
Sbjct: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMF--- 256
Query: 471 HA-NPIIVSCGWDRLSR 518
HA IIVS D+ R
Sbjct: 257 HAKQDIIVSNSEDKSIR 273
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 419
Q R+W+ + H V+ +F +VS S D+T+++W+ A K T+
Sbjct: 115 QTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV 172
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H +V SV F IVS S DK+I++W+
Sbjct: 247 HMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
QT+++W+ + GH+ Y+ + P L S D +WD+
Sbjct: 115 QTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
RLWD+ G+ R F H VLS+A S D R + SG D TI +W+ + A C + G
Sbjct: 524 RLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM--G 581
Query: 432 HSDWVSCVRFS 464
H+ V + +S
Sbjct: 582 HNSCVWSLSYS 592
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL- 682
+TV++W + + +GH + ++ +SPDG ASG +D M+WDL+ + + L
Sbjct: 521 KTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM 580
Query: 683 DHNDIITALCFS 718
HN + +L +S
Sbjct: 581 GHNSCVWSLSYS 592
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--G 431
+WDL+ + H V S+++S + + SGS D T+KLW+ + K T ++ G
Sbjct: 567 MWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNG 626
Query: 432 HSDWVSCVRFSPNHANPI 485
+S+ + +R P + P+
Sbjct: 627 NSNRLRSLRTFPTKSTPV 644
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 673
T+ +W L+ + +GH+ + +++ S +GSL ASG D LWD+ L
Sbjct: 564 TIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL 618
Score = 34.7 bits (76), Expect = 0.072
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GH+G V +P D +LSSS D T+ +W + N + K GH++ + D
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNANL--VCYK---GHNYPVWDAQ 467
Query: 205 LSSDGNYALSGSWDKT 252
S G+Y S S D+T
Sbjct: 468 FSPFGHYFASCSHDRT 483
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 506 QTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT- 679
+T ++W + + L+I +G+L+ V P+ + A+G D LWD+ G+ +
Sbjct: 482 RTARIWSMDRIQPLRIM----AGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIF 537
Query: 680 LDHNDIITALCFSP 721
+ H ++ +L SP
Sbjct: 538 IGHRSMVLSLAMSP 551
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
H+G LN ++S DGSL A G D +WD+
Sbjct: 352 HNG-LNCSSISHDGSLVAGGFSDSSIKVWDM 381
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +2
Query: 557 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 721
LGHSG + + T SP G S D LW +L HN + FSP
Sbjct: 415 LGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSP 470
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDG 431
R+W + + R H DV + + I +GS DKT++LW+ EC G
Sbjct: 485 RIWSMDRIQPLRIMAGHLSDV---DWHPNCNYIATGSSDKTVRLWDVQTGECVRIF--IG 539
Query: 432 HSDWVSCVRFSPN 470
H V + SP+
Sbjct: 540 HRSMVLSLAMSPD 552
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
LR G ++ + +P + I + S DKT+ +W + E + GH + +
Sbjct: 495 LRIMAGHLSDVDWHPNC-NYIATGSSDKTVRLWDVQTGEC-----VRIFIGHRSMVLSLA 548
Query: 205 LSSDGNYALSGSWDKTFV 258
+S DG Y SG D T +
Sbjct: 549 MSPDGRYMASGDEDGTIM 566
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +3
Query: 258 LWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECKYTI 419
LWD+ G T F HT DVLSV+ S N +SGS D T +LW+T A +
Sbjct: 183 LWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVR 242
Query: 420 QDDGHSDWVSCVRFSPN 470
GH V+ V+F P+
Sbjct: 243 TFHGHEGDVNTVKFFPD 259
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 183
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 184 HFISDVVLS-SDGNYALSGSWDKT 252
+ V +S S+ N+ +SGS D T
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDST 228
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Query: 468 NHANPIIVSCG 500
N + V+CG
Sbjct: 118 NGQS---VACG 125
Score = 35.1 bits (77), Expect = 0.054
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL---- 673
T ++W + GH G +NTV PDG +G D L+D+ G L
Sbjct: 228 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQ 287
Query: 674 -HTLDHNDIITALCFS 718
H N +T++ FS
Sbjct: 288 PHGDGENGPVTSIAFS 303
Score = 31.9 bits (69), Expect = 0.51
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Frame = +3
Query: 246 QDFRL--WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECKY 413
QD RL W+ + T + V++ AFS + + + G D +++ + A+
Sbjct: 85 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDG 144
Query: 414 TIQDD----GHSDWVSCVRFSPNHANPIIVSCG 500
T+ GH +VSC ++ PN +I S G
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG 177
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +3
Query: 258 LWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECKYTI 419
LWD+ G T F HT DVLSV+ S N +SGS D T +LW+T A +
Sbjct: 121 LWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVR 180
Query: 420 QDDGHSDWVSCVRFSPN 470
GH V+ V+F P+
Sbjct: 181 TFHGHEGDVNTVKFFPD 197
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 183
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 142
Query: 184 HFISDVVLS-SDGNYALSGSWDKT 252
+ V +S S+ N+ +SGS D T
Sbjct: 143 ADVLSVSISGSNPNWFISGSCDST 166
Score = 35.1 bits (77), Expect = 0.054
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL---- 673
T ++W + GH G +NTV PDG +G D L+D+ G L
Sbjct: 166 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQ 225
Query: 674 -HTLDHNDIITALCFS 718
H N +T++ FS
Sbjct: 226 PHGDGENGPVTSIAFS 241
Score = 32.3 bits (70), Expect = 0.38
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 204
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 286
Query: 205 LSSDGNYALSGSWD 246
LS+DG+ +GSWD
Sbjct: 287 LSADGSALCTGSWD 300
Score = 31.9 bits (69), Expect = 0.51
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Frame = +3
Query: 246 QDFRL--WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECKY 413
QD RL W+ + T + V++ AFS + + + G D +++ + A+
Sbjct: 23 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDG 82
Query: 414 TIQDD----GHSDWVSCVRFSPNHANPIIVSCG 500
T+ GH +VSC ++ PN +I S G
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG 115
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 315 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 494
V S+ ++ + +IVS S+D + +WN L K T WV FSPN + V+
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSPNGQS---VA 61
Query: 495 CG 500
CG
Sbjct: 62 CG 63
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +3
Query: 258 LWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECKYTI 419
LWD+ G T F HT DVLSV+ S N +SGS D T +LW+T A +
Sbjct: 183 LWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVR 242
Query: 420 QDDGHSDWVSCVRFSPN 470
GH V+ V+F P+
Sbjct: 243 TFHGHEGDVNTVKFFPD 259
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 183
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 184 HFISDVVLS-SDGNYALSGSWDKT 252
+ V +S S+ N+ +SGS D T
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDST 228
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Query: 468 NHANPIIVSCG 500
N + V+CG
Sbjct: 118 NGQS---VACG 125
Score = 35.1 bits (77), Expect = 0.054
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL---- 673
T ++W + GH G +NTV PDG +G D L+D+ G L
Sbjct: 228 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQ 287
Query: 674 -HTLDHNDIITALCFS 718
H N +T++ FS
Sbjct: 288 PHGDGENGPVTSIAFS 303
Score = 32.3 bits (70), Expect = 0.38
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 204
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 348
Query: 205 LSSDGNYALSGSWD 246
LS+DG+ +GSWD
Sbjct: 349 LSADGSALCTGSWD 362
Score = 31.9 bits (69), Expect = 0.51
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Frame = +3
Query: 246 QDFRL--WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN--TLAECKY 413
QD RL W+ + T + V++ AFS + + + G D +++ + A+
Sbjct: 85 QDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDG 144
Query: 414 TIQDD----GHSDWVSCVRFSPNHANPIIVSCG 500
T+ GH +VSC ++ PN +I S G
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG 177
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-H 688
+K+W + + GHS ++T+ +PDG SGG D +WDL GK LH H
Sbjct: 124 LKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFH 183
Query: 689 NDIITALCFSPTD 727
I +L F P +
Sbjct: 184 EGPIRSLDFHPLE 196
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
+LWD+ K R F H + +V F + SGS D +K+W+ + C T + G
Sbjct: 83 KLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYK--G 140
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
HS +S +RF+P+ +VS G D +
Sbjct: 141 HSRGISTIRFTPD--GRWVVSGGLDNV 165
Score = 40.7 bits (91), Expect = 0.001
Identities = 13/51 (25%), Positives = 30/51 (58%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
+ ++WD+ + ++ H++ + ++ F+ D R +VSG D +K+W+ A
Sbjct: 123 NLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTA 173
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 167 KVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
+K+W + K+ GH + V P G ASG D +WD+ + T H
Sbjct: 82 IKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGH 141
Query: 689 NDIITALCFSP 721
+ I+ + F+P
Sbjct: 142 SRGISTIRFTP 152
Score = 37.1 bits (82), Expect = 0.013
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +3
Query: 225 RTFRFLGQDFRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 398
R F G D+++ A GK T HT V SVAF +++G+ IKLW+ +
Sbjct: 29 RLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWD-V 87
Query: 399 AECKYTIQDDGHSDWVSCVRFSP 467
E K GH S V F P
Sbjct: 88 EEAKMVRAFTGHRSNCSAVEFHP 110
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
L VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 162 LDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Score = 31.5 bits (68), Expect = 0.67
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
E K+ GH + + +P + + + S S D L +W + + G Q GH
Sbjct: 88 EEAKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDANLKIWDIRKK----GCIQT-YKGH 141
Query: 181 SHFISDVVLSSDGNYALSGSWD 246
S IS + + DG + +SG D
Sbjct: 142 SRGISTIRFTPDGRWVVSGGLD 163
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
L +K+W + + GH+ +N + +PDG SGG+D +WDL GK LH
Sbjct: 214 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 273
Query: 680 L-DHNDIITALCFSP 721
H I +L F P
Sbjct: 274 FKSHEGKIQSLDFHP 288
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
+LWDL K R H + +SV F SGS D +K+W+ + C +T + G
Sbjct: 177 KLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK--G 234
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H+ V+ +RF+P+ IVS G D +
Sbjct: 235 HTRGVNVLRFTPD--GRWIVSGGEDNV 259
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++WDL AGK F+ H + S+ F + +GS DKT+K W+ L +
Sbjct: 261 KVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD-LETFELIGSGGTE 319
Query: 435 SDWVSCVRFSPN 470
+ V C+ F+P+
Sbjct: 320 TTGVRCLTFNPD 331
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 419
L + ++WD+ ++ HT+ V + F+ D R IVSG D +K+W+ L K
Sbjct: 214 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWD-LTAGKLLH 272
Query: 420 QDDGHSDWVSCVRFSPN 470
+ H + + F P+
Sbjct: 273 EFKSHEGKIQSLDFHPH 289
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-D 685
T+K+W L K+ GH +V P G ASG D +WD+ +HT
Sbjct: 175 TIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 234
Query: 686 HNDIITALCFSP 721
H + L F+P
Sbjct: 235 HTRGVNVLRFTP 246
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 260 VKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDL 307
Score = 35.9 bits (79), Expect = 0.031
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
V +W + ++ GHS +++VT L A+G LWDL + K + TL H
Sbjct: 134 VNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGH 193
Query: 689 NDIITALCFSP 721
++ F P
Sbjct: 194 RSNCVSVNFHP 204
Score = 34.3 bits (75), Expect = 0.095
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 243 GQDFR--LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
G+D + LW + H+ + SV F + +G+ TIKLW+ L E K
Sbjct: 129 GEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD-LEEAKVV 187
Query: 417 IQDDGHSDWVSCVRFSP 467
GH V F P
Sbjct: 188 RTLTGHRSNCVSVNFHP 204
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
R+WDL G++ F+ H K V SV FS + + SG D ++W+ + + Y I
Sbjct: 406 RVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYII--PA 463
Query: 432 HSDWVSCVRFSP 467
H++ VS V++ P
Sbjct: 464 HANLVSQVKYEP 475
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
L +VW L + + GH + +V SP+G ASGG+D + +WDL K L+
Sbjct: 401 LDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI 460
Query: 680 LD-HNDIITALCFSPTDTGY 736
+ H ++++ + + P + GY
Sbjct: 461 IPAHANLVSQVKYEPQE-GY 479
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/88 (31%), Positives = 43/88 (48%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LW G + FE H + VAF + + + S DKT +LW+ + +Q +GH
Sbjct: 323 KLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQ-EGH 380
Query: 435 SDWVSCVRFSPNHANPIIVSCGWDRLSR 518
S V + F + A + SCG D L+R
Sbjct: 381 SRSVYGIAFQQDGA--LAASCGLDSLAR 406
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +3
Query: 252 FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
+RLWD+ G E H++ V +AF D S D ++W+ L + + G
Sbjct: 363 WRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWD-LRTGRSILVFQG 421
Query: 432 HSDWVSCVRFSPN 470
H V V FSPN
Sbjct: 422 HIKPVFSVNFSPN 434
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 506 QTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+T ++W + T +L + GHS + + DG+L AS G D A +WDL G+ +
Sbjct: 361 KTWRLWDINTGAELLLQE-GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVF 419
Query: 683 D-HNDIITALCFSP 721
H + ++ FSP
Sbjct: 420 QGHIKPVFSVNFSP 433
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
+LW++ T +DH + V FS + + + S D+T KLW T T +G
Sbjct: 280 KLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTF--EG 337
Query: 432 HSDWVSCVRFSPN 470
H D ++ V F P+
Sbjct: 338 HLDRLARVAFHPS 350
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 673
+T K+W T+ L GH L V P G + D LWD+N G L
Sbjct: 320 RTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 374
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L+ H T + +P D + ++S D+T +WK G + GH ++ V
Sbjct: 294 LKDHKERATDVVFSP-VDDCLATASADRTAKLWKTD------GTLLQTFEGHLDRLARVA 346
Query: 205 LSSDGNYALSGSWDKTF 255
G Y + S+DKT+
Sbjct: 347 FHPSGKYLGTTSYDKTW 363
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
+W + H V S+ + D+ I + S D+TIKLW +
Sbjct: 492 IWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTS 537
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
+LWDL K R F H + +V F + SGS D +++W+T + C T + G
Sbjct: 32 KLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYK--G 89
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H+ +S + FSP+ +VS G D +
Sbjct: 90 HTRGISTIEFSPD--GRWVVSGGLDNV 114
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-H 688
++VW + GH+ ++T+ SPDG SGG D +WDL GK LH H
Sbjct: 73 LRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH 132
Query: 689 NDIITALCFSPTD 727
I +L F P +
Sbjct: 133 EGPIRSLDFHPLE 145
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
+ R+WD + ++ HT+ + ++ FS D R +VSG D +K+W+ A
Sbjct: 72 NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 122
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 116 KVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD 161
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
+K+W L K+ GH + V P G ASG D +WD + T H
Sbjct: 31 IKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGH 90
Query: 689 NDIITALCFSP 721
I+ + FSP
Sbjct: 91 TRGISTIEFSP 101
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
HT V SVAF+ + +++G+ IKLW+ L E K GH S V F P
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWD-LEESKMVRAFTGHRSNCSAVEFHP 59
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
L VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 111 LDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 162
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/82 (29%), Positives = 35/82 (42%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
E K+ GH + + +P + + + S S D L VW D G Q GH
Sbjct: 37 EESKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW----DTRKKGCIQT-YKGH 90
Query: 181 SHFISDVVLSSDGNYALSGSWD 246
+ IS + S DG + +SG D
Sbjct: 91 TRGISTIEFSPDGRWVVSGGLD 112
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +2
Query: 461 LTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMK 637
L+ S H + +TV++W L++ K + HS Y+ + +P D + SG D K
Sbjct: 474 LSWSKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAK 532
Query: 638 AMLWDLNDGKHLHTLDHNDIITALCFSPTDTG 733
+W + D + + D ++++TA C++P G
Sbjct: 533 VRIWSIPDHQVVDWNDLHEMVTAACYTPDGQG 564
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/65 (35%), Positives = 41/65 (63%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH 473
F H DVL +++S ++ ++S S DKT++LW+ + K ++ HSD+V+C++F+P
Sbjct: 464 FVGHLDDVLDLSWS-KSQHLLSSSMDKTVRLWDLSS--KTCLKVFSHSDYVTCIQFNPVD 520
Query: 474 ANPII 488
N I
Sbjct: 521 DNYFI 525
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLWDL++ KT + H+ V + F+ VD+ +SGS D +++W ++ + + +D
Sbjct: 492 RLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIW-SIPDHQVVDWNDL 549
Query: 432 HSDWVSCVRFSPNHANPIIVS 494
H + V+ ++P+ ++ S
Sbjct: 550 H-EMVTAACYTPDGQGALVGS 569
Score = 34.7 bits (76), Expect = 0.072
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 617 SGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPTDTGY 736
S D LWDL+ L H+D +T + F+P D Y
Sbjct: 484 SSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPVDDNY 523
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 85 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWD 246
+LSSS DKT+ +W L+ +++ HS +++ + + D NY +SGS D
Sbjct: 482 LLSSSMDKTVRLWDLSSK------TCLKVFSHSDYVTCIQFNPVDDNYFISGSLD 530
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
++W ++ G + FE HT VL +F D Q VS D +KLWN +EC T D
Sbjct: 566 KIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATY--DQ 623
Query: 432 HSDWV 446
H D V
Sbjct: 624 HEDKV 628
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
++VW L K + GH G + + G L A+ G D K ++WD++ G H H
Sbjct: 84 IRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGH 143
Query: 689 NDIITALCFSP 721
+++++ F P
Sbjct: 144 KGVVSSILFHP 154
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 255 RLWDLAAGKTTRR----FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTI 419
R+WDL A T ++ E H V S+A S D + S RDK + LW+ CK T+
Sbjct: 171 RVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATV 230
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRDKTIKLWNTLAECKYT 416
++ R++D+A + H + VLS+ V N IV+GS+DKT++LWN ++
Sbjct: 381 EEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIG 440
Query: 417 IQDDGHSDWVSCVRFS 464
+ GH+ + V F+
Sbjct: 441 V-GTGHNGDILAVAFA 455
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAE 404
+WD+ G T F H V S+ F D+ + ++SGS D T+++W+ A+
Sbjct: 128 VWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAK 178
Score = 35.5 bits (78), Expect = 0.041
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 458
KT H KD+ SVA + ++ + +GS D+T +W L + + + GH + V
Sbjct: 490 KTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWR-LPDLVHVVTLKGHKRRIFSVE 548
Query: 459 FS 464
FS
Sbjct: 549 FS 550
Score = 35.5 bits (78), Expect = 0.041
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+TVK+W +++ GH+ + + DG+ S G D LW++N + + T D
Sbjct: 563 KTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYD 622
Query: 686 -HNDIITAL 709
H D + AL
Sbjct: 623 QHEDKVWAL 631
Score = 35.1 bits (77), Expect = 0.054
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 482
H + + SV FS ++ +++ S DKT+K+W +++ +GH+ V F +
Sbjct: 540 HKRRIFSVEFSTVDQCVMTASGDKTVKIW-AISDGSCLKTFEGHTSSVLRASFITDGTQ- 597
Query: 483 IIVSCGWDRL 512
VSCG D L
Sbjct: 598 -FVSCGADGL 606
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWN 392
RLW+ + H D+L+VAF+ + VSGS D+T+K+W+
Sbjct: 429 RLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +1
Query: 19 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL--TRDENNYGIPQKR---LYGHS 183
G GHNG + +A K +S S D+TL VW L +++ I K + H
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499
Query: 184 HFISDVVLSSDGNYALSGSWDKT 252
I+ V ++ + + +GS D+T
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRT 522
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +2
Query: 509 TVKVWHLT--NCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 676
TV+VW L N + K + H + ++ +S DG S G+D LWDL+D
Sbjct: 169 TVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKA 228
Query: 677 TLDHNDIITAL 709
T+ +++ A+
Sbjct: 229 TVATYEVLEAV 239
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 503 GQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
G + + T+ +K G S L + +SPD L S G + +WDL
Sbjct: 39 GDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDL 89
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+T +W L + + GH + +V S + D +W ++DG L T +
Sbjct: 521 RTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFE 580
Query: 686 -HNDIITALCFSPTDTGYV 739
H + F T +V
Sbjct: 581 GHTSSVLRASFITDGTQFV 599
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 428
+LWD+ G+ F +H K SV FS ++ SGS D ++KLWN C TI++
Sbjct: 779 KLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGTIRNI 838
Query: 429 GHSDWVSCVRFSPNHAN 479
+ V CV+FSP ++
Sbjct: 839 AN---VCCVQFSPQSSH 852
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H K V S A +DN +V+ S D T+KLW+
Sbjct: 881 HNKAV-SYAKFLDNETLVTASTDNTLKLWD 909
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
VK+W +T + + + H +V S + ASG D LW++N+ L T+ +
Sbjct: 778 VKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGTIRN 837
Query: 689 NDIITALCFSP 721
+ + FSP
Sbjct: 838 IANVCCVQFSP 848
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 398
D LW++A GK +++ H + V + FS D+ +VSGS+D +I++W+ +
Sbjct: 101 DIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLI 150
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 599 DGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
DG+L SG +D +WD +H+ TL H
Sbjct: 274 DGNLLISGSEDGVVCVWDPKSLRHVRTLIH 303
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
+ +W + KL GH + + S D SL SG +D +W L
Sbjct: 102 IYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVD--NRQIVSGSRDKTIKLWN 392
F +HT V + N I+S S D+T K+W+
Sbjct: 169 FNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWS 203
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQ 422
RLWD+ A K T H DVL+VAF D +Q+ S + D I W+T+ YTI+
Sbjct: 502 RLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 558
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
LGQ + VW + GH +N VT SPD L A+G D K +W++ G T
Sbjct: 328 LGQLL-VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFIT 386
Query: 680 L-DHNDIITALCF 715
+H + +TAL F
Sbjct: 387 FTEHTNAVTALHF 399
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++W++ +G F +HT V ++ F DN ++S S D T++ W+
Sbjct: 374 KVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 419
Score = 34.7 bits (76), Expect = 0.072
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV++W + K + H+ + TV PDG AS D + WD +G ++T++
Sbjct: 500 TVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 558
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +2
Query: 518 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK-HLHTLDHND 694
VW ++K GH ++ + SP L AS D LWD+ K + T HN
Sbjct: 461 VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNH 520
Query: 695 IITALCFSP 721
+ + F P
Sbjct: 521 DVLTVAFRP 529
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQ 422
RLWD+ A K T H DVL+VAF D +Q+ S + D I W+T+ YTI+
Sbjct: 542 RLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 598
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
LGQ + VW + GH +N VT SPD L A+G D K +W++ G T
Sbjct: 368 LGQLL-VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFIT 426
Query: 680 L-DHNDIITALCF 715
+H + +TAL F
Sbjct: 427 FTEHTNAVTALHF 439
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++W++ +G F +HT V ++ F DN ++S S D T++ W+
Sbjct: 414 KVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 459
Score = 34.7 bits (76), Expect = 0.072
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV++W + K + H+ + TV PDG AS D + WD +G ++T++
Sbjct: 540 TVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 598
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +2
Query: 518 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK-HLHTLDHND 694
VW ++K GH ++ + SP L AS D LWD+ K + T HN
Sbjct: 501 VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNH 560
Query: 695 IITALCFSP 721
+ + F P
Sbjct: 561 DVLTVAFRP 569
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+TV++W + + I H ++ V +P D + SG D K +WD++ + +
Sbjct: 384 ETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQFRVVDYT 443
Query: 683 DHNDIITALCFSPTDTGYV 739
D I+TALC+ P G V
Sbjct: 444 DIRQIVTALCYRPDGKGAV 462
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH 473
F HT ++L +++S + ++S S D+T++LW + I+ H +V+CV F+P
Sbjct: 359 FRGHTGEILDLSWS-EKGFLLSSSVDETVRLWR-VGSSDECIRVFSHKSFVTCVAFNPVD 416
Query: 474 ANPII 488
N I
Sbjct: 417 DNYFI 421
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 392
RLW + + R H V VAF+ VD+ +SGS D +++W+
Sbjct: 387 RLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWD 433
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
VK+W + + GH G + + VS + +L AS D +W L DG + L H
Sbjct: 329 VKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGH 388
Query: 689 NDIITALCFSP 721
+TA+ FSP
Sbjct: 389 TGAVTAIAFSP 399
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVW 123
LRGH G VT IA +P+ + +LSSS D T +W
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIW 419
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS---VDNRQIVSGSRDKTIKLWN 392
R+W L G HT V ++AFS Q++S S D T ++W+
Sbjct: 372 RVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
+LWDL K R H + +SV F SGS D +K+W+ + C +T + G
Sbjct: 84 KLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK--G 141
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H+ V+ +RF+P+ +VS G D +
Sbjct: 142 HTRGVNVLRFTPD--GRWVVSGGEDNI 166
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 419
L + ++WD+ ++ HT+ V + F+ D R +VSG D +K+W+ L K
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD-LTAGKLLT 179
Query: 420 QDDGHSDWVSCVRFSPN 470
+ H + + F P+
Sbjct: 180 EFKSHEGQIQSLDFHPH 196
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
L +K+W + + GH+ +N + +PDG SGG+D +WDL GK L
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180
Query: 680 L-DHNDIITALCFSP 721
H I +L F P
Sbjct: 181 FKSHEGQIQSLDFHP 195
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++WDL AGK F+ H + S+ F + +GS D+T+K W+ L +
Sbjct: 168 KVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD-LETFELIGSGGPE 226
Query: 435 SDWVSCVRFSPN 470
+ V C+ F+P+
Sbjct: 227 TAGVRCLSFNPD 238
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-D 685
T+K+W L K+ GH +V P G ASG D +WD+ +HT
Sbjct: 82 TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141
Query: 686 HNDIITALCFSP 721
H + L F+P
Sbjct: 142 HTRGVNVLRFTP 153
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 167 VKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 34.7 bits (76), Expect = 0.072
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
V +W + ++ GHS +++VT L A+G LWDL + K + TL H
Sbjct: 41 VNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGH 100
Query: 689 NDIITALCFSP 721
++ F P
Sbjct: 101 RSNCISVDFHP 111
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 243 GQDFR--LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
G+D + LW + H+ + SV F + +G+ TIKLW+ L E K
Sbjct: 36 GEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEAKIV 94
Query: 417 IQDDGHSDWVSCVRFSP 467
GH V F P
Sbjct: 95 RTLTGHRSNCISVDFHP 111
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
+LWDL K R H + +SV F SGS D +K+W+ + C +T + G
Sbjct: 84 KLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK--G 141
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H+ V+ +RF+P+ +VS G D +
Sbjct: 142 HTRGVNVLRFTPD--GRWVVSGGEDNI 166
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 419
L + ++WD+ ++ HT+ V + F+ D R +VSG D +K+W+ L K
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD-LTAGKLLT 179
Query: 420 QDDGHSDWVSCVRFSPN 470
+ H + + F P+
Sbjct: 180 EFKSHEGQIQSLDFHPH 196
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
L +K+W + + GH+ +N + +PDG SGG+D +WDL GK L
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180
Query: 680 L-DHNDIITALCFSP 721
H I +L F P
Sbjct: 181 FKSHEGQIQSLDFHP 195
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++WDL AGK F+ H + S+ F + +GS D+T+K W+ L +
Sbjct: 168 KVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD-LETFELIGSGGPE 226
Query: 435 SDWVSCVRFSPN 470
+ V C+ F+P+
Sbjct: 227 TAGVRCLSFNPD 238
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-D 685
T+K+W L K+ GH +V P G ASG D +WD+ +HT
Sbjct: 82 TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141
Query: 686 HNDIITALCFSP 721
H + L F+P
Sbjct: 142 HTRGVNVLRFTP 153
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 167 VKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 34.7 bits (76), Expect = 0.072
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DH 688
V +W + ++ GHS +++VT L A+G LWDL + K + TL H
Sbjct: 41 VNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGH 100
Query: 689 NDIITALCFSP 721
++ F P
Sbjct: 101 RSNCISVDFHP 111
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 243 GQDFR--LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
G+D + LW + H+ + SV F + +G+ TIKLW+ L E K
Sbjct: 36 GEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEAKIV 94
Query: 417 IQDDGHSDWVSCVRFSP 467
GH V F P
Sbjct: 95 RTLTGHRSNCISVDFHP 111
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+WD+ ++ +E+H K SV FS + +VSGS D +K+W T E I D
Sbjct: 447 VWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEAS-VINIDMK 505
Query: 435 SDWVSCVRFSPNHANPIIV 491
++ + CV+++P +N I V
Sbjct: 506 AN-ICCVKYNPGSSNYIAV 523
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
RLWD+ R F HT + V +V++ + GS + +++
Sbjct: 573 RLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYH 618
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDG 431
R+WDL + F+ H K VLSV FS + + SG D ++W+ + + Y I
Sbjct: 155 RVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYII--PA 212
Query: 432 HSDWVSCVRFSP 467
H + VS V++ P
Sbjct: 213 HVNLVSQVKYEP 224
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 515 KVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HN 691
+VW L + + GH + +V SP+G ASGG+D + +WDL K L+ + H
Sbjct: 155 RVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHV 214
Query: 692 DIITALCFSPTD 727
++++ + + P +
Sbjct: 215 NLVSQVKYEPQE 226
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 303 HTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 395
H + V V FS VD+ + + S D+T K+W T
Sbjct: 105 HKEHVTDVVFSSVDDECLATASTDRTEKIWKT 136
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 RLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
+LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L D
Sbjct: 124 KLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLD 182
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H V+CV + P +++ D ++
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 204
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 205 LSSDGNYALSGSWDKT 252
D Y ++GS D T
Sbjct: 195 TGGDKPYLITGSDDHT 210
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD + E HT +V +V F + I++GS D T+++W+
Sbjct: 212 KVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W+ + FE V S F + +V+G+ D I+++N K + + HS
Sbjct: 41 IWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHS 99
Query: 438 DWVSCVRFSPNHANPIIVSCGWDRL 512
D++ CV P P ++S D L
Sbjct: 100 DYIRCVAVHP--TLPYVLSSSDDML 122
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL--DHNDIITALCFSPTDT 730
HS Y+ V V P S DM LWD G + H+ + + F+P DT
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDT 155
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
+LWD GK F H + V S+AFS + I SGS DK+I +W+
Sbjct: 524 KLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPTDTG 733
GH G +N V P GSL AS D A +W++ +H L +H I + +SPT G
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPG 504
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
TVK+W K+ + GH + ++ SP+G ASG D +W + +GK + T
Sbjct: 522 TVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTG 581
Query: 689 NDIITALCFS 718
N I +C++
Sbjct: 582 NGGIFEVCWN 591
Score = 35.5 bits (78), Expect = 0.041
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSV-------DNRQ--IVSGSRDKTIKLWNTLAEC 407
++W++ +HTK++ ++ +S N+Q + S S D T+KLW+ AE
Sbjct: 473 KIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWD--AEL 530
Query: 408 -KYTIQDDGHSDWVSCVRFSPN 470
K +GH + V + FSPN
Sbjct: 531 GKMLCSFNGHREPVYSLAFSPN 552
Score = 34.7 bits (76), Expect = 0.072
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG--KHLHT 679
T + H+ N ++I GH+ + SP SL ASG D A +W + +G K +HT
Sbjct: 247 TSQTSHIPNSDVRILE-GHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHT 304
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
R+W L G+ H + S+ ++ +++GS D+T +W+ AE ++ Q + H
Sbjct: 349 RIWTLN-GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAE-EWKQQFEFH 406
Query: 435 S------DWVSCVRFSPNHANPIIVSC 497
S DW + V F+ + + +I C
Sbjct: 407 SGPTLDVDWRNNVSFATSSTDSMIYLC 433
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
R E HT +V + A+S + SGS D T ++W+
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWS 293
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/86 (26%), Positives = 42/86 (48%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
+L TL H G + + N K D +L+ S D+T +VW + +E +++ HS
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE-----WKQQFEFHSGP 409
Query: 190 ISDVVLSSDGNYALSGSWDKTFVCGI 267
DV ++ ++A S + ++C I
Sbjct: 410 TLDVDWRNNVSFATSSTDSMIYLCKI 435
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 721
GH+ ++ +V SPDG A+G D LWDL + T+ +HND + ++ F P
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRP 295
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 270 AAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDW 443
A GKT HT VLSV S D I +GS D+T++LW+ + + IQ H+D
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWD--LKMRAAIQTMSNHNDQ 287
Query: 444 VSCVRFSP 467
V V F P
Sbjct: 288 VWSVAFRP 295
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
L +TVK+W L + GHS + + P G + AS D ++D++ +
Sbjct: 38 LDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAV 97
Query: 680 LD 685
L+
Sbjct: 98 LE 99
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
KL L GHN V + +P P ++ S S D + + + G + GH+ +
Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLG----SMSGHTSW 245
Query: 190 ISDVVLSSDGNYALSGSWDKT 252
+ V S DG +GS D+T
Sbjct: 246 VLSVDASPDGGAIATGSSDRT 266
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 45.2 bits (102), Expect = 5e-05
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 RLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
+LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L D
Sbjct: 124 KLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLD 182
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H V+CV + P +++ D ++
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 204
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 205 LSSDGNYALSGSWDKT 252
D Y ++GS D T
Sbjct: 195 TGGDKPYLITGSDDHT 210
Score = 35.9 bits (79), Expect = 0.031
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 212 KVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 34.7 bits (76), Expect = 0.072
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W+ T+ FE V S F + +V+G+ D I+++N K + + HS
Sbjct: 41 IWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHS 99
Query: 438 DWVSCVRFSPNHANPIIVSCGWDRL 512
D++ CV P P ++S D L
Sbjct: 100 DYIRCVAVHP--TLPYVLSSSDDML 122
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL--DHNDIITALCFSPTDT 730
HS Y+ V V P S DM LWD +G + H+ + + F+P DT
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDT 155
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 45.2 bits (102), Expect = 5e-05
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 RLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
+LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L D
Sbjct: 124 KLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLD 182
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H V+CV + P +++ D ++
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 204
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 205 LSSDGNYALSGSWDKT 252
D Y ++GS D T
Sbjct: 195 TGGDKPYLITGSDDHT 210
Score = 35.9 bits (79), Expect = 0.031
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 212 KVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 34.7 bits (76), Expect = 0.072
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W+ T+ FE V S F + +V+G+ D I+++N K + + HS
Sbjct: 41 IWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHS 99
Query: 438 DWVSCVRFSPNHANPIIVSCGWDRL 512
D++ CV P P ++S D L
Sbjct: 100 DYIRCVAVHP--TLPYVLSSSDDML 122
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL--DHNDIITALCFSPTDT 730
HS Y+ V V P S DM LWD +G + H+ + + F+P DT
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDT 155
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 45.2 bits (102), Expect = 5e-05
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 RLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
+LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L D
Sbjct: 124 KLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLD 182
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H V+CV + P +++ D ++
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 204
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 205 LSSDGNYALSGSWDKT 252
D Y ++GS D T
Sbjct: 195 TGGDKPYLITGSDDHT 210
Score = 35.9 bits (79), Expect = 0.031
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 212 KVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 34.7 bits (76), Expect = 0.072
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W+ T+ FE V S F + +V+G+ D I+++N K + + HS
Sbjct: 41 IWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHS 99
Query: 438 DWVSCVRFSPNHANPIIVSCGWDRL 512
D++ CV P P ++S D L
Sbjct: 100 DYIRCVAVHP--TLPYVLSSSDDML 122
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL--DHNDIITALCFSPTDT 730
HS Y+ V V P S DM LWD +G + H+ + + F+P DT
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDT 155
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+TV++W + C + H+ ++ V +P D + SG D K +WD+ + +
Sbjct: 343 ETVRLWRV-GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYT 401
Query: 683 DHNDIITALCFSPTDTGYV 739
D DI+TA+C+ P G V
Sbjct: 402 DIRDIVTAVCYRPDAKGAV 420
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPTDTGY 736
GH G + ++ S G L +S D LW + + L T HN+ +T + F+P D Y
Sbjct: 320 GHIGEILDLSWSEKGYLLSSS-VDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVDDNY 377
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLW + + R F H V VAF+ VD+ +SGS D +++W+ + C+ D
Sbjct: 346 RLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTRCRVVDYTD- 402
Query: 432 HSDWVSCVRFSPNHANPIIVS 494
D V+ V + P+ +I S
Sbjct: 403 IRDIVTAVCYRPDAKGAVIGS 423
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDE------CLRTFTHNNFVTCVAF 370
Query: 208 SS-DGNYALSGSWD 246
+ D NY +SGS D
Sbjct: 371 NPVDDNYFISGSID 384
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Frame = +2
Query: 428 WTQRLGVMCQIL-TQSC-----QPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVT 589
W ++LGV+ +L + C Q H + L++ + H G + +
Sbjct: 166 WLKKLGVLTHVLESMDCESVRTQLHQVARVQTHKKQFKELSSMCIDQEFSAHDGSILAMK 225
Query: 590 VSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
SPDG AS G+D +W + + + T + ++ + + F
Sbjct: 226 FSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYF 267
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 34 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL 682
+TV++W + C + H+ ++ V +P D + SG D K +WD+ + +
Sbjct: 343 ETVRLWRV-GCDECLRTFTHNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYT 401
Query: 683 DHNDIITALCFSPTDTGYV 739
D DI+TA+C+ P G V
Sbjct: 402 DIRDIVTAVCYRPDAKGAV 420
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPTDTGY 736
GH G + ++ S G L +S D LW + + L T HN+ +T + F+P D Y
Sbjct: 320 GHIGEILDLSWSEKGYLLSSS-VDETVRLWRVGCDECLRTFTHNNFVTCVAFNPVDDNY 377
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLW + + R F H V VAF+ VD+ +SGS D +++W+ + C+ D
Sbjct: 346 RLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTRCRVVDYTD- 402
Query: 432 HSDWVSCVRFSPNHANPIIVS 494
D V+ V + P+ +I S
Sbjct: 403 IRDIVTAVCYRPDAKGAVIGS 423
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDE------CLRTFTHNNFVTCVAF 370
Query: 208 SS-DGNYALSGSWD 246
+ D NY +SGS D
Sbjct: 371 NPVDDNYFISGSID 384
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Frame = +2
Query: 428 WTQRLGVMCQIL-TQSC-----QPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVT 589
W ++LGV+ +L + C Q H + L++ + H G + +
Sbjct: 166 WLKKLGVLTHVLESMDCESVRTQLHQVARVQTHKKQFKELSSMCIDQEFSAHDGSILAMK 225
Query: 590 VSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCF 715
SPDG AS G+D +W + + + T + ++ + + F
Sbjct: 226 FSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYF 267
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 34 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 482 HYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 661
H + L TVKV+++ + K ++ GH + + +S DG L +G +D +W L+
Sbjct: 554 HIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDF 613
Query: 662 GK-HLHTLDHNDIITALCF 715
G H H D + + F
Sbjct: 614 GDCHKSIFAHGDSVMGVKF 632
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-D 685
++++W ++N H G + + + GS+ ASG KD +LWD+ L L
Sbjct: 87 SIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRG 146
Query: 686 HNDIITALCF 715
H D +T L F
Sbjct: 147 HRDQVTDLVF 156
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +1
Query: 34 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 213
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFLD 158
Query: 214 DGNYALSGSWDK 249
G +S S DK
Sbjct: 159 GGKKLVSSSKDK 170
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHAN 479
H V+ + S D IV+GS+DK +K+W +C +I H D V V+F N
Sbjct: 581 HKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSI--FAHGDSVMGVKFVRN--T 636
Query: 480 PIIVSCGWDRL 512
+ S G DRL
Sbjct: 637 HYLFSIGKDRL 647
Score = 36.7 bits (81), Expect = 0.018
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
R+WD G F H V ++ ++ + SGS+D I LW+ + E + GH
Sbjct: 89 RIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGE-SGLFRLRGH 147
Query: 435 SDWVSCVRF 461
D V+ + F
Sbjct: 148 RDQVTDLVF 156
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
D LWD+ R H V + F +++VS S+DK +++W+ + I
Sbjct: 129 DIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSG 188
Query: 429 GHSD 440
HS+
Sbjct: 189 HHSE 192
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 548 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
I H GH + +VT+S D +L S + +W+ + G L T+D
Sbjct: 400 IEHQGHRSDVRSVTLSEDNTLLMSTSHS-EVKIWNPSTGSCLRTID 444
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 312 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 464
DVL+VA S D + I D T+K++ + K+ + GH V C+ S
Sbjct: 542 DVLAVAISPDAKHIAVALLDSTVKVF-YMDSLKFYLSLYGHKLPVMCIDIS 591
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
LRGH VT + ++ SSS+DK L VW L E + + + + GH + V
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLV-SSSKDKFLRVWDL---ETQHCM--QIVSGHHSEVWSVD 197
Query: 205 LSSDGNYALSGSWDK 249
+ Y ++GS D+
Sbjct: 198 TDPEERYVVTGSADQ 212
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLH 676
+ +TV++W + K + H+ Y+ + SP D + SG D K +W + D +
Sbjct: 525 MDKTVRLWDIET-KTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQDRHVVE 583
Query: 677 TLDHNDIITALCFSPTDTG 733
D ++++TA C++P G
Sbjct: 584 WSDLHEMVTAACYTPDGQG 602
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 479
H +L +++S ++ ++S S DKT++LW+ E K ++ H+D+V+C++FSP N
Sbjct: 505 HLDAILDLSWS-KSQLLLSSSMDKTVRLWDI--ETKTCLKLFAHNDYVTCIQFSPVDEN 560
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 608 LCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPTDTGY 736
L S D LWD+ L HND +T + FSP D Y
Sbjct: 519 LLLSSSMDKTVRLWDIETKTCLKLFAHNDYVTCIQFSPVDENY 561
Score = 34.7 bits (76), Expect = 0.072
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLWD+ KT + H V + FS VD +SGS D I++W+ + ++ ++
Sbjct: 530 RLWDIET-KTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWS--IQDRHVVEWSD 586
Query: 432 HSDWVSCVRFSPNHANPIIVS 494
+ V+ ++P+ +I S
Sbjct: 587 LHEMVTAACYTPDGQGALIGS 607
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 201
+L+GH + ++ + ++LSSS DKT+ +W + E + +L+ H+ +++ +
Sbjct: 501 SLKGHLDAILDLSWSKS--QLLLSSSMDKTVRLWDI---ETKTCL---KLFAHNDYVTCI 552
Query: 202 VLSS-DGNYALSGSWD 246
S D NY LSGS D
Sbjct: 553 QFSPVDENYFLSGSLD 568
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 RLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
+LWD G T+ FE H+ V+ V F+ D S S D+TIK+WN L D
Sbjct: 124 KLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLD 182
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
H V+CV + P +++ D ++
Sbjct: 183 AHLKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +1
Query: 31 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 210
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ + L G + D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHLKGVN--CVDYFTG 196
Query: 211 SDGNYALSGSWDKT 252
D Y ++GS D T
Sbjct: 197 GDKPYLITGSDDHT 210
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD + E HT +V +V+F + I++GS D T+++W+
Sbjct: 212 KVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +2
Query: 437 RLGVMCQILTQSCQPHYCILWLG-QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLC 613
R V C IL +S + Y I + VKVW + + GH G + + VS +
Sbjct: 245 RNAVYCAILDRSGR--YVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFI 302
Query: 614 ASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 721
AS D +W L DG + L H +TA+ FSP
Sbjct: 303 ASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSP 339
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++W + H D+ +A S +N I S S D I++W ++ GH
Sbjct: 270 KVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLR-GH 328
Query: 435 SDWVSCVRFSPNHANP 482
+ V+ + FSP +P
Sbjct: 329 TGAVTAIAFSPRPGSP 344
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 123
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSV---DNRQIVSGSRDKTIKLWN 392
R+W L G HT V ++AFS Q++S S D T ++W+
Sbjct: 312 RVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWD 360
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/58 (36%), Positives = 39/58 (67%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
F H DVL +++S ++ ++S S DKT++LW+ E + ++ H+D+V+CV+F+P
Sbjct: 515 FTGHLDDVLDLSWS-RSQLLLSSSMDKTVRLWDI--ETQSCLKLFAHNDYVTCVQFNP 569
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +2
Query: 500 LGQTVKVWHL-TNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHL 673
+ +TV++W + T LK+ H+ Y+ V +P D SG D K +W++++ + +
Sbjct: 538 MDKTVRLWDIETQSCLKL--FAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQVV 595
Query: 674 HTLDHNDIITALCFSP 721
D +++TA+C++P
Sbjct: 596 EWNDLKEMVTAVCYTP 611
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 608 LCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPTDTGY 736
L S D LWD+ L HND +T + F+P D Y
Sbjct: 532 LLLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPLDEDY 574
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLWD+ + F H V V F+ +D +SGS D I++WN + ++ +
Sbjct: 543 RLWDIETQSCLKLFA-HNDYVTCVQFNPLDEDYFISGSLDAKIRIWN--ISNRQVVEWND 599
Query: 432 HSDWVSCVRFSPN 470
+ V+ V ++P+
Sbjct: 600 LKEMVTAVCYTPD 612
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 661
H G + T+ SPD L AS G+D +W++ +
Sbjct: 410 HQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQE 442
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 132
L HN +VT + NP D +S S D + +W ++
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS 590
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 82 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWD 246
++LSSS DKT+ +W + +L+ H+ +++ V + D +Y +SGS D
Sbjct: 532 LLLSSSMDKTVRLWDIETQS------CLKLFAHNDYVTCVQFNPLDEDYFISGSLD 581
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/80 (30%), Positives = 45/80 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++W + G RRF+ H++ V S++FS D Q++S S D+T ++ + L K + GH
Sbjct: 288 KIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI-HGLKSGKLLKEFRGH 346
Query: 435 SDWVSCVRFSPNHANPIIVS 494
+ +V+ F+ + + I S
Sbjct: 347 TSYVNHAIFTSDGSRIITAS 366
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQ 422
Q R+ L +GK + F HT V F+ D +I++ S D T+K+W++ +C T +
Sbjct: 327 QTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFK 386
Query: 423 DD----GHSDWVSCVRFSPNHANPIIV 491
G V+ + P + I+V
Sbjct: 387 PPPPLRGTDASVNSIHLFPKNTEHIVV 413
Score = 37.1 bits (82), Expect = 0.013
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Frame = +3
Query: 258 LWDLAAGKTTR--------RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 413
+WD +GK + F H VL + FS D+ + SGS+D IK+W +
Sbjct: 239 VWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWR-IRTGVC 297
Query: 414 TIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRLSR 518
+ D HS V+ + FS + + ++S +D+ +R
Sbjct: 298 IRRFDAHSQGVTSLSFSRDGSQ--LLSTSFDQTAR 330
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +1
Query: 79 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKT 252
+M+ S S+D + +W++ G+ +R HS ++ + S DG+ LS S+D+T
Sbjct: 276 EMLASGSQDGKIKIWRIRT-----GVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQT 328
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
QT ++ L + KL GH+ Y+N + DGS + D +WD
Sbjct: 327 QTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFS 718
H + + S D + ASG +D K +W + G + D H+ +T+L FS
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFS 314
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
R+WD+ +T H ++LS ++ D+ + + S DKT+K+W+ + +G
Sbjct: 175 RIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNG 234
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWD 506
H V V+FSP H +I SC +D
Sbjct: 235 HGYAVRKVKFSP-HRRSLIASCSYD 258
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWD 652
+TVKVW + + ++ + L GY + V SP SL AS DM LWD
Sbjct: 215 KTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 159
T + H V Q NPK+ D+ S+S D TL +W + + IP
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP 189
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +3
Query: 285 TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD---DGHSDWVSCV 455
+R ++ H K V SVA++ + ++ SGS D+T ++WN +D GH+D V +
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 456 RFSPNHANPIIVSCG 500
+ P H++ + + G
Sbjct: 73 CWDPKHSDLVATASG 87
Score = 34.3 bits (75), Expect = 0.095
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL-----NDGKHLHTLDHNDIITALCFSPT 724
GH +++V + +G+ ASG D A +W++ + K L H D + LC+ P
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK 77
Query: 725 DTGYV 739
+ V
Sbjct: 78 HSDLV 82
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 123
L+GH V Q+ +PK+ D++ ++S DK++ +W
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 386
RLWD +GK T++ E +++ ++ + D + G+RD + +
Sbjct: 92 RLWDARSGKCTQQVELSGENI-NITYKPDGTHVAVGNRDDELTI 134
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +3
Query: 246 QDFRLWDLAAG-KTTRRFEDH--TKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKY 413
Q+ LWDLA K +F H +K V+ F +D+ I SGS D + +WN L K
Sbjct: 419 QEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWN-LKNTKP 477
Query: 414 TIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 506
GHS V+CV ++P NP +++ D
Sbjct: 478 LEVLSGHSMTVNCVSWNPK--NPRMLASASD 506
Score = 34.3 bits (75), Expect = 0.095
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 123
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 509 TVKVWH-LTNCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
T +W L + K+++ H H ++ V+ SPD + + G LWD++ G HT
Sbjct: 247 TAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHT 306
Query: 680 LDHND 694
+N+
Sbjct: 307 FGNNN 311
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +2
Query: 506 QTVKVWHLTN-CKLKINHLGH--SGY-LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 673
Q + +W L K + GH S Y + + D S ASG +D + +W+L + K L
Sbjct: 419 QEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPL 478
Query: 674 HTLD-HNDIITALCFSP 721
L H+ + + ++P
Sbjct: 479 EVLSGHSMTVNCVSWNP 495
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 389
+W+L K H+ V V+++ N R + S S D+TI++W
Sbjct: 469 IWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +3
Query: 240 LGQD--FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 413
+G+D R++D K + + +L ++S+D + I++G D +++W+ + + K
Sbjct: 321 VGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVWS-MEDRKV 379
Query: 414 TIQDDGHSDWVSCVRFSPNHANP 482
+GH+ WVS V F N ++P
Sbjct: 380 VAWGEGHNSWVSGVAFDSNWSSP 402
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
G+D R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 167 GEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
T +W N + + GH+G + VS D S +G D A LWD+ GK L T
Sbjct: 33 TPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKF 92
Query: 689 NDIITALCFSPTD 727
N ++ F+ D
Sbjct: 93 NAPTRSVDFAVGD 105
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALCFSPTDTGYV 739
+N P SGG+D +WD GK L D H IT+LC + D+ ++
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFL 209
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
G+D R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 167 GEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
T +W N + + GH+G + VS D S +G D A LWD+ GK L T
Sbjct: 33 TPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKF 92
Query: 689 NDIITALCFSPTD 727
N ++ F+ D
Sbjct: 93 NAPTRSVDFAVGD 105
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALCFSPTDTGYV 739
+N P SGG+D +WD GK L D H IT+LC + D+ ++
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFL 209
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKD 631
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
G+D R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 167 GEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
T +W N + + GH+G + VS D S +G D A LWD+ GK L T
Sbjct: 33 TPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKF 92
Query: 689 NDIITALCFSPTD 727
N ++ F+ D
Sbjct: 93 NAPTRSVDFAVGD 105
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALCFSPTDTGYV 739
+N P SGG+D +WD GK L D H IT+LC + D+ ++
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFL 209
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKD 631
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 240 LGQD--FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 413
+G+D R++D + K + + +L A+S+D + +++G D +++W+ + + K
Sbjct: 321 VGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWS-MEDRKV 379
Query: 414 TIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRLSRSG 524
+GH+ WVS V F ++P G + + R G
Sbjct: 380 VAWGEGHNSWVSGVAFDSYWSSPNSEGSGENVMYRFG 416
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE----CKYTIQD 425
L+D +G+ H+K V SV F D+ +++ S DKT+++W + C YT+ D
Sbjct: 248 LFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLND 307
Query: 426 DGHSDWVSCVRFSPNHANPIIVSCGWD 506
HS V V P N VS D
Sbjct: 308 --HSAEVRAVTVHP--TNKYFVSASLD 330
Score = 37.9 bits (84), Expect = 0.008
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 190 ISDVVLSSDGNYALSGSWDKTF----VCGISLQARLPDDSRTI 306
+ V + Y +S S D T+ + S A++ DDS+ +
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNV 354
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/46 (23%), Positives = 29/46 (63%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 378 KIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
VK+W + + GH+G + ++ S +G A+ +D LWDL
Sbjct: 377 VKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWDL 423
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 596 PDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPTDTGY 736
PDG + +G +WD+ ++ D H +TA+ FS + GY
Sbjct: 363 PDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS--ENGY 408
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE----CKYTIQD 425
L+D +G+ H+K V SV F D+ +++ S DKT+++W + C YT+ D
Sbjct: 248 LFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLND 307
Query: 426 DGHSDWVSCVRFSPNHANPIIVSCGWD 506
HS V V P N VS D
Sbjct: 308 --HSAEVRAVTVHP--TNKYFVSASLD 330
Score = 37.9 bits (84), Expect = 0.008
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 190 ISDVVLSSDGNYALSGSWDKTF----VCGISLQARLPDDSRTI 306
+ V + Y +S S D T+ + S A++ DDS+ +
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNV 354
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/46 (23%), Positives = 29/46 (63%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 378 KIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
VK+W + + GH+G + ++ S +G A+ +D LWDL
Sbjct: 377 VKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWDL 423
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 596 PDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPTDTGY 736
PDG + +G +WD+ ++ D H +TA+ FS + GY
Sbjct: 363 PDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS--ENGY 408
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 521 WHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHND 694
W + + K+K+ GHS YL+TV S +G +D A +WD GK + + D
Sbjct: 186 WDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQD 243
Score = 34.7 bits (76), Expect = 0.072
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 261 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
WD+ +GK F+ H+ + +V QI++GS D T ++W+
Sbjct: 186 WDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWD 229
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +2
Query: 503 GQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
G TV +W T+ + H G +++V P+G L A+ GK+ K +WDL + + T+
Sbjct: 260 GGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI 319
Query: 683 DHNDIITALCFS 718
H+ L FS
Sbjct: 320 -HSFHAKTLSFS 330
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+ ++VW + GH+ + + + G C SG D LWDL + LHT
Sbjct: 235 KVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYA 294
Query: 686 -HNDIITALCFSPT 724
H D + AL +P+
Sbjct: 295 VHTDSVWALACNPS 308
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDG 431
R+WD G + + HT +V + R +SGS D I+LW+ C +T
Sbjct: 238 RVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHT 297
Query: 432 HSDWVSCVRFSPNH 473
S W S +H
Sbjct: 298 DSVWALACNPSFSH 311
Score = 36.3 bits (80), Expect = 0.024
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE--CKYTIQDDGHSDWVSCVRFSP 467
FE H V A + ++ +VS S D T+K W+ L++ C T++ HSD+V+C+ +
Sbjct: 80 FESHVDWVNDAALAGEST-LVSCSSDTTVKTWDGLSDGVCTRTLRQ--HSDYVTCLAVAA 136
Query: 468 NHANPIIVSCG 500
+ N ++ S G
Sbjct: 137 KN-NNVVASGG 146
Score = 34.3 bits (75), Expect = 0.095
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 208 SSDGNYALSGSWD 246
S G + LSGS D
Sbjct: 264 DSTGRFCLSGSSD 276
Score = 33.1 bits (72), Expect = 0.22
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 312 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHANPII 488
DVL + S D + +GSRD T+K W + + + + H DWV+ + +
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA---GESTL 98
Query: 489 VSCGWDRLSRS--GISLTVSSR 548
VSC D ++ G+S V +R
Sbjct: 99 VSCSSDTTVKTWDGLSDGVCTR 120
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 386
RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 280 RLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 276 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 440
G T + H + V ++A + +VSG +K +++W+ K +++ GH+D
Sbjct: 203 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTD 256
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG-KHLHTLDHNDIITALCFSPT 724
GH + + ++ G++ SGG + +WD G K + H D + L T
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDST 266
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+ ++VW + GH+ + + + G C SG D LWDL + LHT
Sbjct: 235 KVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYA 294
Query: 686 -HNDIITALCFSPT 724
H D + AL +P+
Sbjct: 295 VHTDSVWALACNPS 308
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDG 431
R+WD G + + HT +V + R +SGS D I+LW+ C +T
Sbjct: 238 RVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHT 297
Query: 432 HSDWVSCVRFSPNH 473
S W S +H
Sbjct: 298 DSVWALACNPSFSH 311
Score = 36.3 bits (80), Expect = 0.024
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE--CKYTIQDDGHSDWVSCVRFSP 467
FE H V A + ++ +VS S D T+K W+ L++ C T++ HSD+V+C+ +
Sbjct: 80 FESHVDWVNDAALAGEST-LVSCSSDTTVKTWDGLSDGVCTRTLRQ--HSDYVTCLAVAA 136
Query: 468 NHANPIIVSCG 500
+ N ++ S G
Sbjct: 137 KN-NNVVASGG 146
Score = 34.3 bits (75), Expect = 0.095
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 208 SSDGNYALSGSWD 246
S G + LSGS D
Sbjct: 264 DSTGRFCLSGSSD 276
Score = 33.1 bits (72), Expect = 0.22
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 312 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHANPII 488
DVL + S D + +GSRD T+K W + + + + H DWV+ + +
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA---GESTL 98
Query: 489 VSCGWDRLSRS--GISLTVSSR 548
VSC D ++ G+S V +R
Sbjct: 99 VSCSSDTTVKTWDGLSDGVCTR 120
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 386
RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 280 RLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 276 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 440
G T + H + V ++A + +VSG +K +++W+ K +++ GH+D
Sbjct: 203 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTD 256
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG-KHLHTLDHNDIITALCFSPT 724
GH + + ++ G++ SGG + +WD G K + H D + L T
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDST 266
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +3
Query: 237 FLGQD---FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTL-- 398
+ GQD F +WDL AGK+ +E H + + S+ F+ N ++ + S D T LW+
Sbjct: 322 YFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSM 381
Query: 399 -AECKYTIQDDGHSDWVSCVRFSPN 470
A+ T+ HS V FSP+
Sbjct: 382 GAKKPKTLSTVNHSRAVHSAYFSPS 406
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 560 GHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFS 718
GH G L + SP D +L A+GG D KA LW + +G L H D ++ L FS
Sbjct: 68 GHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFS 122
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN- 479
HT+ + + + ++ +SGS+D ++ + N + K + H+D V CV+FSP+ A
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTG-KVVSSLNSHTDSVECVKFSPSSATI 299
Query: 480 PIIVSCGWDR 509
P+ + G D+
Sbjct: 300 PLAATGGMDK 309
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS---LCASGGKDMKAMLWDLNDGKHLHT 679
+V + ++ K+ + H+ + V SP + L A+GG D K ++WDL
Sbjct: 265 SVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFI 324
Query: 680 LDHNDIITALCFSPT 724
+H + +T+L + T
Sbjct: 325 CEHEEGVTSLTWIGT 339
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 201
T GH G + +A +P ++ + D +WK+ + +P GH +S +
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119
Query: 202 VLSSDGNYALSGSWD 246
S DG SG D
Sbjct: 120 AFSYDGQLLASGGLD 134
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
LW + G H V +AFS D + + SG D +++++ + + DG
Sbjct: 97 LWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVL-DGPG 155
Query: 438 DWVSCVRFSP 467
+ VR+ P
Sbjct: 156 AGIEWVRWHP 165
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 518 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+W + N GH ++ + S DG L ASGG D ++D + G LD
Sbjct: 97 LWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLD 152
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCV 455
K F HT +VL +++S DN ++S S DKT++LW + +C H+ +V+ V
Sbjct: 319 KPLYEFRGHTGEVLDISWSKDN-YLLSASMDKTVRLWKVGSNDCLGVF---AHNSYVTSV 374
Query: 456 RFSPNHAN 479
+F+P + N
Sbjct: 375 QFNPVNEN 382
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLH 676
+ +TV++W + + + H+ Y+ +V +P + + SG D K +W+++ +
Sbjct: 347 MDKTVRLWKVGSNDC-LGVFAHNSYVTSVQFNPVNENYFMSGSIDGKVRIWNISGCSVVD 405
Query: 677 TLDHNDIITALCFSPTDTG 733
D DII+A+C+ P G
Sbjct: 406 WADLKDIISAVCYRPDGQG 424
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPTDTGY 736
GH+G + ++ S D L S D LW + L HN +T++ F+P + Y
Sbjct: 326 GHTGEVLDISWSKDNYLL-SASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVNENY 383
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
RGH G V I+ + + +LS+S DKT+ +WK+ ++ G+ + H+ +++ V
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKVGSND-CLGV-----FAHNSYVTSVQF 376
Query: 208 SS-DGNYALSGSWD 246
+ + NY +SGS D
Sbjct: 377 NPVNENYFMSGSID 390
Score = 31.9 bits (69), Expect = 0.51
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLW + + F H V SV F+ V+ +SGS D +++WN ++ C D
Sbjct: 352 RLWKVGSNDCLGVFA-HNSYVTSVQFNPVNENYFMSGSIDGKVRIWN-ISGCSVVDWAD- 408
Query: 432 HSDWVSCVRFSPNHANPIIVS 494
D +S V + P+ II S
Sbjct: 409 LKDIISAVCYRPDGQGGIIGS 429
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
RL+D+ K R F HT + + FS D + ++S S D ++++W+ + + D H
Sbjct: 540 RLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQI---DGVH 596
Query: 435 SDW-VSCVRFSPN 470
D ++ + SPN
Sbjct: 597 VDVPITALSLSPN 609
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 691
++++ + K+ GH+ + + S DG S D +WD+ K + + H
Sbjct: 539 IRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGV-HV 597
Query: 692 DI-ITALCFSP 721
D+ ITAL SP
Sbjct: 598 DVPITALSLSP 608
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/73 (32%), Positives = 32/73 (43%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
T VW N + + GHSG + +S D S +G D A LWD+ GK L T
Sbjct: 60 TPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKF 119
Query: 689 NDIITALCFSPTD 727
++ FS D
Sbjct: 120 GAPARSVDFSVGD 132
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
G+D R+WD GK ++ ++ H + + S+ + D+ ++GS DKT KLW+
Sbjct: 194 GEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWD 248
Score = 34.3 bits (75), Expect = 0.095
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD----HNDIITALCFSPTDTGYV 739
+N P SGG+D +WD GK L D H + IT+LC + D+ ++
Sbjct: 178 INRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFL 236
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
+W G+ + H+ V S D+ ++++GS D+T KLW+
Sbjct: 63 VWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWD 107
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKD 631
GH G +N + SPDG +SGG+D
Sbjct: 315 GHFGPINALAFSPDGKSFSSGGED 338
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+TVK+W++ KL+ GH ++ S DG + DM A LW + GK +
Sbjct: 233 KTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQ 292
Query: 686 HNDIITALC 712
+ T C
Sbjct: 293 GHHKATVCC 301
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +3
Query: 255 RLWDLAAG--KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
RL+D+ + + ++ HT +V++V F D + + SGS D T+K+W+ A
Sbjct: 59 RLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRA 109
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L+ HNG + + +P + +SS DKT+ +W + + + + +K L GH ++ D V
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASS-DKTVKIWNV----DGFKL-EKVLTGHQRWVWDCV 260
Query: 205 LSSDGNYALSGSWDKT 252
S DG + ++ S D T
Sbjct: 261 FSVDGEFLVTASSDMT 276
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++W++ K + H + V FSVD +V+ S D T +LW+ A + + H
Sbjct: 236 KIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHH 295
Query: 435 SDWVSC 452
V C
Sbjct: 296 KATVCC 301
Score = 35.5 bits (78), Expect = 0.041
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Frame = +3
Query: 258 LWDLAAGKTT-------RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
+W L GK T + + H +L S N+ + + S DKT+K+WN + K
Sbjct: 188 VWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWN-VDGFKLE 246
Query: 417 IQDDGHSDWV-SCV 455
GH WV CV
Sbjct: 247 KVLTGHQRWVWDCV 260
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GH V + NP +I S S D+ + +W++ D N+ + L GH + I D+
Sbjct: 49 LSGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDLH 103
Query: 205 LSSDGNYALSGSWDKT 252
+SDG+ +S S DKT
Sbjct: 104 WTSDGSQIVSASPDKT 119
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
VKVW L + + GH + +++SPDGS + G D K +WD+
Sbjct: 204 VKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 34.7 bits (76), Expect = 0.072
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWDLNDGKHLHTL 682
+TV+ W + K HS ++N+ + G L SG D A LWD+ + T
Sbjct: 118 KTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTF 177
Query: 683 DHNDIITALCFS 718
ITA+ FS
Sbjct: 178 PDKYQITAVSFS 189
Score = 34.7 bits (76), Expect = 0.072
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD- 685
T K+W + + I + V+ S +GG D +WDL G+ TL+
Sbjct: 162 TAKLWDMRQ-RGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEG 220
Query: 686 HNDIITALCFSPTDTGYV 739
H D IT + SP D Y+
Sbjct: 221 HQDTITGMSLSP-DGSYL 237
Score = 34.7 bits (76), Expect = 0.072
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
D ++WDL G+ T E H + ++ S D +++ D + +W+
Sbjct: 203 DVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 482
H V ++ F+ I SGS D+ I LW +CK + GH + + + ++ + +
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ- 110
Query: 483 IIVSCGWDRLSRS 521
IVS D+ R+
Sbjct: 111 -IVSASPDKTVRA 122
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 392
R WD+ GK ++ +H+ V S + I+SGS D T KLW+
Sbjct: 121 RAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 533 NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITAL 709
+CK + GH + + + DGS S D WD+ GK + + +H+ + +
Sbjct: 85 DCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSC 144
Query: 710 CFSPTDTG 733
C PT G
Sbjct: 145 C--PTRRG 150
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWV-SCVRFSPNHAN 479
H +L + ++ D QIVS S DKT++ W+ + K + HS +V SC P
Sbjct: 95 HKNAILDLHWTSDGSQIVSASPDKTVRAWD-VETGKQIKKMAEHSSFVNSC---CPTRRG 150
Query: 480 PIIVSCGWD 506
P ++ G D
Sbjct: 151 PPLIISGSD 159
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPTD 727
SPDG+ +G D +WD + ++ L H + F PT+
Sbjct: 281 SPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTE 326
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN-DGKHLHTL-DHNDIITAL 709
GH + T+ +P G+L ASG D + LW ++ D K+ L H + I L
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDL 102
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 79 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWD 246
D I + D + VW L + E L GH I+ + LS DG+Y L+ D
Sbjct: 193 DKIFTGGVDNDVKVWDLRKGEATM-----TLEGHQDTITGMSLSPDGSYLLTNGMD 243
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 41.1 bits (92), Expect = 8e-04
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +3
Query: 261 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
WD+ G+ T+ ++ H V ++ F +NR+ V+ S DK++++W
Sbjct: 397 WDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 439
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 190 ISDVVLSSDGNYALSGSWDK 249
+ D+ S+DG+ L+ +DK
Sbjct: 329 VRDICFSNDGSKFLTAGYDK 348
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 RLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
++WD+ +GK R + H K V + FS D + ++ DK IK W+T
Sbjct: 308 KIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDT 355
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 512 VKVWHLTNC-KLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
VK+W + N K ++GH+ + + S DGS + G D WD G+ + T
Sbjct: 307 VKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFST 366
Query: 689 NDIITALCFSPTD 727
I + +P D
Sbjct: 367 GKIPYVVKLNPDD 379
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = +2
Query: 560 GH--SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSPTDT 730
GH +GY V SPDG SG + K WD K TL HN + + P +
Sbjct: 498 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQ 557
Query: 731 GYV 739
V
Sbjct: 558 SKV 560
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALC 712
GH G +N + + +GSL SG D++ +W+ + K LH++D C
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFC 98
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
+ E H V ++A++ + ++SGS D I +WN + D GH+ + C +F P
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Query: 468 NHANPIIVSCGWD 506
++ ++VS D
Sbjct: 104 ETSDELVVSGAGD 116
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 485 YCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
+C +T+K+W + LK+ GH G + + VS + S G D + WDL
Sbjct: 185 FCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQN 244
Query: 665 KHLHTL-DHNDIITALCFSPT 724
K + + H + L PT
Sbjct: 245 KVIRSYHGHLHGVYCLALHPT 265
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L+GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 166 LQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219
Query: 205 LSSDGNYALSGSWDKTFVC 261
+S+ Y S DK C
Sbjct: 220 VSNRHTYMFSAGDDKQVKC 238
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 691
VK W L K+ ++ GH + + + P + +GG+D +WD+ + L H+
Sbjct: 236 VKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHD 295
Query: 692 DIITALCFSPTD 727
+ ++ PTD
Sbjct: 296 SDVFSVLARPTD 307
Score = 34.7 bits (76), Expect = 0.072
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
R+WD+ K H DV SV + Q+++GS D TIK W+
Sbjct: 279 RVWDIRT-KMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWD 323
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 270 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
A K R + H V SVAF N +GS D+TIK+W+
Sbjct: 158 APWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 198
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 383
+ WDL GK+ +H K V ++A VS S D K
Sbjct: 320 KFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKK 362
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
GH G++ +V P +G D +WD+ G
Sbjct: 168 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 202
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFS 464
++ E H V +V+F+ + ++SGS D+ + LW+ L K + GH++ V +F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFH-SGHANNVFQAKFM 111
Query: 465 PNHANPIIVSCGWDRLSR 518
P + IV+C D + R
Sbjct: 112 PFSDDRTIVTCAADGMVR 129
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
H G +NTV+ + +G + SG D + +LWD
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWD 87
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPTDTGYV 739
GH G + + + + AS D A LWD G LH+ +H I+ A FS DT Y+
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS-QDTKYL 117
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 243 GQDF--RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
G+D RL+D GK + H V V F+ SGS D TI++W T
Sbjct: 247 GEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIWQT 299
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 503 GQTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLH- 676
G TVK W + L + + + ++ P G+ +GG+DM L+D + GK +
Sbjct: 207 GSTVKFWDANHFGL-VKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGC 265
Query: 677 TLDHNDIITALCFSPTDTGY 736
H+ + + F+PT Y
Sbjct: 266 NKGHHGPVHCVRFAPTGESY 285
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 171 RLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQD-DG 431
LW K E+HT + + FS ++ + S DKT+++W+ A+ K Y+++ G
Sbjct: 677 LWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWD--ADNKGYSLRTFMG 734
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWD 506
HS V+ + F P + +I SC D
Sbjct: 735 HSSMVTSLDFHP-IKDDLICSCDND 758
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPT 724
S DG + AS G D KA+LW + K TL +H +IT + FSP+
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPS 704
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL---NDGKHLHTLDHN 691
GH+ +N+V P G AS +DM +W L ++G+ +H L N
Sbjct: 816 GHANPINSVCWDPSGDFLASVSEDM-VKVWTLGTGSEGECVHELSCN 861
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 479 PHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 649
P ++ Q++++W+++ K + H G + ++ VS L AS D LW
Sbjct: 875 PSLLVIGCYQSLELWNMSENKT-MTLPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +3
Query: 255 RLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECK 410
RL+DL + R F HTK+V++V F + SGS D ++K+W+ + EC+
Sbjct: 64 RLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQ 119
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 667
+TVK+W+L KL+ GH ++ S DG + D A LW + GK
Sbjct: 239 KTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGK 292
Score = 36.3 bits (80), Expect = 0.024
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L+ HN + + +P + +SS DKT+ +W L + + + +K L GH ++ D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASS-DKTVKIWNL----DGFKL-EKVLTGHERWVWDCD 266
Query: 205 LSSDGNYALSGSWDKT 252
S DG Y ++ S D T
Sbjct: 267 FSMDGEYLVTASSDTT 282
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFS 464
+ + H +L S N+ + + S DKT+K+WN L K GH WV FS
Sbjct: 212 KLQAHNSHILKCLLSPGNKYLATASSDKTVKIWN-LDGFKLEKVLTGHERWVWDCDFS 268
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
++W+L K + H + V FS+D +V+ S D T +LW+ A
Sbjct: 242 KIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRA 290
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 404
++WDL + R F V +V + +++SG ++ I++W+ A+
Sbjct: 109 KIWDLRVRECQREFRS-VSPVNTVVLHPNQTELISGDQNGNIRVWDLRAD 157
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/92 (31%), Positives = 46/92 (50%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
++ TL GH+ VT I D++L++S DKT+ +W + D NY + L HS
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSED-GNY-TSRHTLKDHSAE 311
Query: 190 ISDVVLSSDGNYALSGSWDKTFVCGISLQARL 285
+ V + + Y +S S D T+ C L + L
Sbjct: 312 VRAVTVHATNKYFVSASLDSTW-CFYDLSSGL 342
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
L+D +G+ H+K V S+ F D +++ S DKT+++W + YT
Sbjct: 248 LFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYT 300
Score = 34.3 bits (75), Expect = 0.095
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 691
VK+W + + GH+G + +++ S +G A+ D LWDL K+ T D
Sbjct: 378 VKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD-GVRLWDLRKLKNFRTFDFP 436
Query: 692 D 694
D
Sbjct: 437 D 437
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 392
+WD+++G+ HT V +V S +R +VS + D+TIKLW+
Sbjct: 299 VWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWD 344
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKY 413
GQD ++WD +G + ++L +A + DN+ +++ + + +W+ + ++
Sbjct: 250 GQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRH 309
Query: 414 TIQDDGHSDWVSCV---RFSPNHANPIIVSCGWDR 509
T+ GH+D V V +FS H +VS +DR
Sbjct: 310 TL--TGHTDKVCAVDVSKFSSRH----VVSAAYDR 338
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LWDL G T T + ++ S+D + SG D ++LW+ + K + GH
Sbjct: 341 KLWDLHKGYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRLWD-IQTGKLLSEVAGH 398
Query: 435 SDWVSCVRFSPNHANPIIVS 494
S V+ V S N N I+ S
Sbjct: 399 SSAVTSVSLSRN-GNRILTS 417
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL- 682
+ VK+W + L + G G + + V+ D + +WD++ G+ HTL
Sbjct: 253 RAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLT 312
Query: 683 DHNDIITALCFSPTDTGYV 739
H D + A+ S + +V
Sbjct: 313 GHTDKVCAVDVSKFSSRHV 331
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 518 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSL-CASGGKDMKAMLWDLNDGKHLHTLDHND 694
VW +++ +++ GH+ + V VS S S D LWDL+ G +T+
Sbjct: 299 VWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTS 358
Query: 695 IITALCFS 718
A+C S
Sbjct: 359 NCNAICLS 366
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 458
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 459 FSP 467
F+P
Sbjct: 404 FNP 406
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+V++W + C+ + H+ Y+ +V +P D SG D K +W + + + D
Sbjct: 378 SVRLWQI-GCEDCLGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQCQVVDWAD 436
Query: 686 HNDIITALCFSP 721
I+TA+C+ P
Sbjct: 437 ARGIVTAVCYQP 448
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 557 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPTD 727
LGHSG + ++ S + L S D LW + L HN+ +T++ F+P D
Sbjct: 353 LGHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVD 408
Score = 31.1 bits (67), Expect = 0.89
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLW + F H V SV F+ VD+ +SGS D +++W+ ++C+ D
Sbjct: 380 RLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA-SQCQVVDWADA 437
Query: 432 HSDWVSCVRFSPNHANPII 488
V+ V + P+ II
Sbjct: 438 RG-IVTAVCYQPDGQAVII 455
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 34 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 458
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 459 FSP 467
F+P
Sbjct: 404 FNP 406
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
+V++W + C+ + H+ Y+ +V +P D SG D K +W + + + D
Sbjct: 378 SVRLWQI-GCEDCLGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQCQVVDWAD 436
Query: 686 HNDIITALCFSP 721
I+TA+C+ P
Sbjct: 437 ARGIVTAVCYQP 448
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 557 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSPTD 727
LGHSG + ++ S + L S D LW + L HN+ +T++ F+P D
Sbjct: 353 LGHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVD 408
Score = 31.1 bits (67), Expect = 0.89
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
RLW + F H V SV F+ VD+ +SGS D +++W+ ++C+ D
Sbjct: 380 RLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSA-SQCQVVDWADA 437
Query: 432 HSDWVSCVRFSPNHANPII 488
V+ V + P+ II
Sbjct: 438 RG-IVTAVCYQPDGQAVII 455
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 34 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+WD+ + + F H V + F ++ SGS D+T+K+WN + + + ++ GH
Sbjct: 248 IWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN-VEDKAFITENHGH 305
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCF 715
HS + VS DG A+GG D +WD+ +H+ H + ++ LCF
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCF 272
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H + V+SVA S D+ + S S+D TI W+
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWD 189
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G +H L
Sbjct: 655 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 713
Query: 686 HN 691
++
Sbjct: 714 NS 715
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W++ + E+H + V F ++ Q+ + S DKTIK+W+ + GH+
Sbjct: 534 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 593
Query: 438 DWVSCVRFSPNHANPIIVSC 497
V + F P ++ SC
Sbjct: 594 APVMSIDFHPKKTE-LLCSC 612
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPTDT 730
S DG L AS G D K +W++ + T +H IIT + F P T
Sbjct: 517 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 563
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LW L++G + SV F ++ + I+LWNT+ T+ GH
Sbjct: 699 KLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA--GH 756
Query: 435 SDWVSCVRFSPNHANPIIVSCGWDR 509
+S + SP + ++ S D+
Sbjct: 757 ECVISALAQSP--STGVVASASHDK 779
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLHTLD 685
VK+W L++ I+ L +SG ++V P L GG LW+ + K +
Sbjct: 698 VKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELWNTMENKCMTVAG 755
Query: 686 HNDIITALCFSPTDTGYV 739
H +I+AL SP+ TG V
Sbjct: 756 HECVISALAQSPS-TGVV 772
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G +H L
Sbjct: 657 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Query: 686 HN 691
++
Sbjct: 716 NS 717
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W++ + E+H + V F ++ Q+ + S DKTIK+W+ + GH+
Sbjct: 536 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 438 DWVSCVRFSPNHANPIIVSC 497
V + F P ++ SC
Sbjct: 596 APVMSIDFHPKKTE-LLCSC 614
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPTDT 730
S DG L AS G D K +W++ + T +H IIT + F P T
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LW L++G + SV F ++ + I+LWNT+ T+ GH
Sbjct: 701 KLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA--GH 758
Query: 435 SDWVSCVRFSPNHANPIIVSCGWDR 509
+S + SP + ++ S D+
Sbjct: 759 ECVISALAQSP--STGVVASASHDK 781
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLHTLD 685
VK+W L++ I+ L +SG ++V P L GG LW+ + K +
Sbjct: 700 VKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELWNTMENKCMTVAG 757
Query: 686 HNDIITALCFSPTDTGYV 739
H +I+AL SP+ TG V
Sbjct: 758 HECVISALAQSPS-TGVV 774
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G +H L
Sbjct: 657 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Query: 686 HN 691
++
Sbjct: 716 NS 717
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W++ + E+H + V F ++ Q+ + S DKTIK+W+ + GH+
Sbjct: 536 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 438 DWVSCVRFSPNHANPIIVSC 497
V + F P ++ SC
Sbjct: 596 APVMSIDFHPKKTE-LLCSC 614
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPTDT 730
S DG L AS G D K +W++ + T +H IIT + F P T
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LW L++G + SV F ++ + I+LWNT+ T+ GH
Sbjct: 701 KLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA--GH 758
Query: 435 SDWVSCVRFSPNHANPIIVSCGWDR 509
+S + SP + ++ S D+
Sbjct: 759 ECVISALAQSP--STGVVASASHDK 781
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLHTLD 685
VK+W L++ I+ L +SG ++V P L GG LW+ + K +
Sbjct: 700 VKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELWNTMENKCMTVAG 757
Query: 686 HNDIITALCFSPTDTGYV 739
H +I+AL SP+ TG V
Sbjct: 758 HECVISALAQSPS-TGVV 774
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G +H L
Sbjct: 657 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Query: 686 HN 691
++
Sbjct: 716 NS 717
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W++ + E+H + V F ++ Q+ + S DKTIK+W+ + GH+
Sbjct: 536 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 438 DWVSCVRFSPNHANPIIVSC 497
V + F P ++ SC
Sbjct: 596 APVMSIDFHPKKTE-LLCSC 614
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPTDT 730
S DG L AS G D K +W++ + T +H IIT + F P T
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LW L++G + SV F ++ + I+LWNT+ T+ GH
Sbjct: 701 KLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA--GH 758
Query: 435 SDWVSCVRFSPNHANPIIVSCGWDR 509
+S + SP + ++ S D+
Sbjct: 759 ECVISALAQSP--STGVVASASHDK 781
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLHTLD 685
VK+W L++ I+ L +SG ++V P L GG LW+ + K +
Sbjct: 700 VKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELWNTMENKCMTVAG 757
Query: 686 HNDIITALCFSPTDTGYV 739
H +I+AL SP+ TG V
Sbjct: 758 HECVISALAQSPS-TGVV 774
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD 685
TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G +H L
Sbjct: 657 TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELS 715
Query: 686 HN 691
++
Sbjct: 716 NS 717
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 437
+W++ + E+H + V F ++ Q+ + S DKTIK+W+ + GH+
Sbjct: 536 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 438 DWVSCVRFSPNHANPIIVSC 497
V + F P ++ SC
Sbjct: 596 APVMSIDFHPKKTE-LLCSC 614
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDIITALCFSPTDT 730
S DG L AS G D K +W++ + T +H IIT + F P T
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNST 565
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LW L++G + SV F ++ + I+LWNT+ T+ GH
Sbjct: 701 KLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVA--GH 758
Query: 435 SDWVSCVRFSPNHANPIIVSCGWDR 509
+S + SP + ++ S D+
Sbjct: 759 ECVISALAQSP--STGVVASASHDK 781
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWDLNDGKHLHTLD 685
VK+W L++ I+ L +SG ++V P L GG LW+ + K +
Sbjct: 700 VKLWSLSSGDC-IHELSNSGNKFHSVVFHPSYPDLLVIGGYQA-IELWNTMENKCMTVAG 757
Query: 686 HNDIITALCFSPTDTGYV 739
H +I+AL SP+ TG V
Sbjct: 758 HECVISALAQSPS-TGVV 774
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 38.7 bits (86), Expect = 0.004
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +3
Query: 261 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
WD++ G+ R+F H +V +V F+ + +VS D+++++W+
Sbjct: 87 WDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 126
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 485 YCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
+C + V W ++ ++ GH G +N V + S+ S G D +WD
Sbjct: 75 FCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
K + H VL+ F+ D ++ +D+TI+LWN
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +3
Query: 240 LGQDFRLWDLAAG-KTTRRFEDHTKD---VLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 407
L Q+ RLW++ K R++ H + + S I SGS D + +W+ +
Sbjct: 463 LNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHR-STG 521
Query: 408 KYTIQDDGHSDWVSCVRFSPNH 473
K ++ GH+ V+CV +SP +
Sbjct: 522 KLIVELPGHAGAVNCVSWSPTN 543
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSC 452
+T + E HT +V + FS + + + S S+D+T +W A+ +++ GH V
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 453 VRFSPNHANPIIVSCGWDRLSR 518
+ +SP+ +++CG + + R
Sbjct: 325 ILWSPDDRQ--VLTCGAEEVIR 344
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLN 658
V +WH + KL + GH+G +N V+ SP + AS D +W L+
Sbjct: 513 VYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLD 562
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +1
Query: 43 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGN 222
W Q + N KY + SSS+D+T I+W+++ D + + L GH + ++ S D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISAD--GHISLKHTLVGHHKPVIAILWSPDDR 332
Query: 223 YALS 234
L+
Sbjct: 333 QVLT 336
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSC 452
H K V+++ +S D+RQ+++ ++ I+ W+ +C + + G S +SC
Sbjct: 318 HHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISP-ISC 367
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +1
Query: 4 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 183
T KL L GH G V ++ +P M+ S+S D T+ +W L R N +K + G S
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR-INQQNQKKKLVQGSS 578
Query: 184 HFISDVVLSSDGN 222
+ V+ +GN
Sbjct: 579 S--NGVIHRCNGN 589
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 506 QTVKVWHLT---NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 676
QT +W ++ + LK +GH + + SPD + G + WD++ G +H
Sbjct: 296 QTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVH 355
Query: 677 TLDHNDIITALC 712
+ I C
Sbjct: 356 MYEKGGISPISC 367
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 282 TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
T R + + S + S DN+ I+ ++ I+LWN + K + GH
Sbjct: 435 TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGH 485
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +2
Query: 500 LGQTVKVWHLT-NCKLKINHLGHSGYLNTVTVSPDG---SLCASGGKDMKAMLWDLNDGK 667
L Q +++W++ + K+ + GH + G + ASG +D + +W + GK
Sbjct: 463 LNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGK 522
Query: 668 HLHTL-DHNDIITALCFSPTD 727
+ L H + + +SPT+
Sbjct: 523 LIVELPGHAGAVNCVSWSPTN 543
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+WD +G F+ H++ VLS A +IV+ D + + K+ + H
Sbjct: 130 MWD--SGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEG-PPFKFKLSSREH 186
Query: 435 SDWVSCVRFSPNHANPIIVS 494
S++V+CVRF+P+ + I VS
Sbjct: 187 SNFVNCVRFAPDGSKFITVS 206
Score = 34.3 bits (75), Expect = 0.095
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD--LNDGKHLHTLDHNDIITALCFSPTDT 730
H G ++ + SPD S+ AS + +A++WD + K + L H+ I L +SP T
Sbjct: 490 HRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNST 547
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 661
GH G + V+ SPDG + D A +WD++D
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISD 263
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 539 KLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHND 694
K K++ HS ++N V +PDGS + D K +++D + L L +D
Sbjct: 178 KFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDD 229
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
+ H + +V++S D +Q+++ S DK+ K+W+
Sbjct: 229 DGHKGSIYAVSWSPDGKQVLTVSADKSAKIWD 260
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKI-NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 658
L + VW + ++K+ N L HS +N + SP+ ++ A+G D ++++++
Sbjct: 511 LNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVD 564
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
++WD G+ ++ +H K SV FS D + VSGS D ++KLW ++ E K ++
Sbjct: 791 QIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLW-SINE-KRSLGTIW 848
Query: 432 HSDWVSCVRFSPNHANPII 488
V CV+FS +++N ++
Sbjct: 849 SPANVCCVQFS-SYSNHLL 866
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H K V V F +D+ IVS S D ++KLWN
Sbjct: 893 HEKAVSYVKF-MDSETIVSASTDNSLKLWN 921
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
++GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 172 IQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLA 225
Query: 205 LSSDGNYALSGSWDKTFVC 261
+S+ Y S DK C
Sbjct: 226 VSNRHTYMFSAGDDKQVKC 244
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +2
Query: 485 YCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
+C +T+K+W + LK+ GH + + VS + S G D + WDL
Sbjct: 191 FCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQN 250
Query: 665 KHLHTL-DHNDIITALCFSPT 724
K + + H + L PT
Sbjct: 251 KVIRSYHGHLSGVYCLALHPT 271
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-H 688
VK W L K+ ++ GH + + + P + +GG+D +WD+ + L H
Sbjct: 242 VKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGH 301
Query: 689 NDIITALCFSPTD 727
++ + ++ PTD
Sbjct: 302 DNTVCSVFTRPTD 314
Score = 35.5 bits (78), Expect = 0.041
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +3
Query: 270 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVS 449
A K R + H V SVAF N +GS D+TIK+W+ +A + GH + V
Sbjct: 164 APWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD-VATGVLKLTLTGHIEQVR 222
Query: 450 CVRFSPNH 473
+ S H
Sbjct: 223 GLAVSNRH 230
Score = 34.7 bits (76), Expect = 0.072
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
R+WD+ H V SV + Q+V+GS D TIK W+
Sbjct: 285 RVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWD 330
Score = 34.3 bits (75), Expect = 0.095
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 515 KVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHN 691
+VW + K++I L GH + +V P +G D WDL GK + TL H+
Sbjct: 285 RVWDIRT-KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHH 343
Query: 692 -DIITALCFSPTDTGY 736
+ A+ P + +
Sbjct: 344 KKSVRAMTLHPKENAF 359
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/76 (28%), Positives = 30/76 (39%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L GH+ V + T P P +++ S D T+ W L YG L H + +
Sbjct: 298 LSGHDNTVCSVFTRPTDP-QVVTGSHDTTIKFWDL-----RYGKTMSTLTHHKKSVRAMT 351
Query: 205 LSSDGNYALSGSWDKT 252
L N S S D T
Sbjct: 352 LHPKENAFASASADNT 367
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 383
+ WDL GKT H K V ++ S S D T K
Sbjct: 327 KFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK 369
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSPTDT 730
GH G++ +V P +G D +WD+ G TL H + + L S T
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/78 (30%), Positives = 36/78 (46%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 470
+ H V +V F+ +VSGS D+ I LWN L+ + GH + V +F P
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPF 109
Query: 471 HANPIIVSCGWDRLSRSG 524
+ I++ G D R G
Sbjct: 110 TDDRTIITSGADGQVRLG 127
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 664
GH G +N V + G + SG D + MLW+ G
Sbjct: 53 GHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 264 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 443
D+ K HT DV+ + +S D+ + SGS D T+ +WN T+ GH
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVL-RGHLSL 162
Query: 444 VSCVRFSP 467
V V + P
Sbjct: 163 VKGVTWDP 170
Score = 35.5 bits (78), Expect = 0.041
Identities = 26/86 (30%), Positives = 37/86 (43%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 180
E K TLRGH V + +P M+ S S D T+ +W + G+ L GH
Sbjct: 106 ENWKAVMTLRGHTADVVDLNWSPD-DSMLASGSLDNTVHIWNMRT-----GMCTTVLRGH 159
Query: 181 SHFISDVVLSSDGNYALSGSWDKTFV 258
+ V G++ S S DKT +
Sbjct: 160 LSLVKGVTWDPIGSFIASQSDDKTVI 185
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT 679
L TV +W++ GH + VT P GS AS D ++W +D H
Sbjct: 138 LDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHR 197
Query: 680 LD 685
D
Sbjct: 198 TD 199
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 419
L +W++ G T H V V + I S S DKT+ +W T ++
Sbjct: 138 LDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRT-SDWGMAH 196
Query: 420 QDDGH 434
+ DGH
Sbjct: 197 RTDGH 201
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 533 NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITAL 709
N K + GH+ + + SPD S+ ASG D +W++ G L H ++ +
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGV 166
Query: 710 CFSP 721
+ P
Sbjct: 167 TWDP 170
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 126
LRGH V + +P I S S DKT+I+W+
Sbjct: 156 LRGHLSLVKGVTWDP-IGSFIASQSDDKTVIIWR 188
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = +1
Query: 25 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 183
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 184 HFISDVVLSSDGNYALSGSWDKT 252
+ V GN S SWD T
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCT 228
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = +1
Query: 25 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 183
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 184 HFISDVVLSSDGNYALSGSWDKT 252
+ V GN S SWD T
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCT 228
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITAL 709
GH + +V P SL SGGKD LWD G+ L +L H +I+ ++
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSV 316
Score = 36.7 bits (81), Expect = 0.018
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
+LWD +G+ H VLSV ++ + +++ S+D+ IKL++ + K GH
Sbjct: 293 KLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYD-IRTMKELQSFRGH 351
Query: 435 SDWVSCVRFSPNH 473
+ V+ + + P H
Sbjct: 352 TKDVTSLAWHPCH 364
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLW 389
Q +L+D+ K + F HTKDV S+A+ + + VSGS D +I W
Sbjct: 332 QIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Score = 34.7 bits (76), Expect = 0.072
Identities = 23/83 (27%), Positives = 37/83 (44%)
Frame = +1
Query: 4 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 183
T+K + RGH VT +A +P + + +S S D ++ W + + IP H
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPN----AHD 396
Query: 184 HFISDVVLSSDGNYALSGSWDKT 252
+ + D+ G SGS D T
Sbjct: 397 NSVWDLAWHPIGYLLCSGSNDHT 419
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 470
H DV SV + +VSG +D+ +KLW+T + + GH + V V+++ N
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSG-RELCSLHGHKNIVLSVKWNQN 321
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL- 682
Q VK+W + + + GH + +V + +G+ + KD L+D+ K L +
Sbjct: 290 QLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFR 349
Query: 683 DHNDIITALCFSPTDTGY 736
H +T+L + P Y
Sbjct: 350 GHTKDVTSLAWHPCHEEY 367
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 31 GHNGW-VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 207
GH GW V + +P +++S +D+ + +W TR G L+GH + + V
Sbjct: 266 GH-GWDVKSVDWHPT-KSLLVSGGKDQLVKLWD-TRS----GRELCSLHGHKNIVLSVKW 318
Query: 208 SSDGNYALSGSWDK 249
+ +GN+ L+ S D+
Sbjct: 319 NQNGNWLLTASKDQ 332
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFS 718
GH G + + + + AS D A LWD G LH+ +H I+ A FS
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 171 RLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 243 GQDF--RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
G+D R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 247 GEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFS 718
GH G + + + + AS D A LWD G LH+ +H I+ A FS
Sbjct: 59 GHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 171 RLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 243 GQDF--RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
G+D R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 247 GEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFS 464
++ H+KDV FS +N+ I S S DKTI++W + C I G S C+RF
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIY--GISPQY-CIRFH 266
Query: 465 PNHAN 479
P + N
Sbjct: 267 PVNNN 271
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 163 KRLYGHSHFISDVVLSSDGNYALSGSWDKT 252
K+L GHS ++D SS+ Y S S DKT
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKT 239
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +1
Query: 25 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTR 135
L GH+ VT ++N +Y I SSS DKT+ VW+L+R
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR 247
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFS 718
GH G + + ++ + AS D A +W+ G LH+ +H I+ A FS
Sbjct: 54 GHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFS 106
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 37.1 bits (82), Expect = 0.013
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Frame = +3
Query: 258 LWDL---AAGKTTRRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLWN--TLAECKYTI 419
+WDL +A K + H+ +V +AF+ N +V+ GS DKT+KL++ L+ +T
Sbjct: 254 IWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTF 313
Query: 420 QDDGHSDWVSCVRFSPNHANPIIVSC 497
D H + V V ++P + I+ SC
Sbjct: 314 --DSHKEEVFQVGWNPKN-ETILASC 336
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
T H V Q+ NPK ++ S + L+VW L+R
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +1
Query: 19 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 198
G + GH V+ +A NP Y I S+S D + +W ++ P GH +
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-----GHQGAVRG 104
Query: 199 VVLSSDGNYALSGSWDKT 252
+ S+DGN +S D T
Sbjct: 105 LTASTDGNVLVSCGTDCT 122
Score = 34.7 bits (76), Expect = 0.072
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
+++W +++ + GH G + +T S DG++ S G D LW++
Sbjct: 81 IRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +3
Query: 303 HTKD---VLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
HTK V V +S D ++SGS D ++LW A
Sbjct: 318 HTKRMQRVFCVKYSCDATYVISGSDDTNLRLWKAKA 353
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 392
++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 559 QVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
V+VW + +L H + ++ S D +L ASG D LW +N G + T+
Sbjct: 558 VQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT 617
Query: 689 NDIITALCFSPTDTG 733
I + F P++TG
Sbjct: 618 KANICCVQF-PSETG 631
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H K V V F VD+ +VS S D T+KLW+
Sbjct: 661 HHKTVSYVRF-VDSSTLVSSSTDNTLKLWD 689
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 198
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 199 VVLS-SDGNYALSGSWDKTFV 258
V LS SDG A ++ FV
Sbjct: 715 VGLSVSDGYIATGSETNEVFV 735
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 392
++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 559 QVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDGKHLHTLDH 688
V+VW + +L H + ++ S D +L ASG D LW +N G + T+
Sbjct: 558 VQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT 617
Query: 689 NDIITALCFSPTDTG 733
I + F P++TG
Sbjct: 618 KANICCVQF-PSETG 631
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H K V V F VD+ +VS S D T+KLW+
Sbjct: 661 HHKTVSYVRF-VDSSTLVSSSTDNTLKLWD 689
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 198
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 199 VVLS-SDGNYALSGSWDKTFV 258
V LS SDG A ++ FV
Sbjct: 715 VGLSVSDGYIATGSETNEVFV 735
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGH 434
+WD+ +GK + + HTK + S+ D +++GS D T ++W+ + C + H
Sbjct: 1006 IWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSRGSCDAVLA--CH 1061
Query: 435 SDWVSCVRFSP 467
+ V V +SP
Sbjct: 1062 AGPVQSVEYSP 1072
Score = 32.3 bits (70), Expect = 0.38
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
+LR TL+GH G V I+++ I+S S D ++IVW D+ + ++ L GH
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW----DKQTTQLLEE-LKGHDSQ 941
Query: 190 ISDVVLSSDGNYALSGSWDKT 252
+S V + S G L+ + D T
Sbjct: 942 VSCVKMLS-GERVLTAAHDGT 961
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 255 RLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
++WD L + + HT V ++ S D +IVSGS D ++ +W+ + +
Sbjct: 880 KIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDK-QTTQLLEELK 936
Query: 429 GHSDWVSCVR 458
GH VSCV+
Sbjct: 937 GHDSQVSCVK 946
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGH-SGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
TVK+W + + + +G S + ++ + A+ G+D A +WD+ GK +H L
Sbjct: 961 TVKMWDVRT-DMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKL 1018
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKL 386
++WD+A GK E H K V +VA++ ++ +SGSRD+T+ L
Sbjct: 240 KVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Score = 35.1 bits (77), Expect = 0.054
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 VAFSVDNRQIV-SGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSC 497
+ F+ +NR IV SGS DK +K+W+ +CK T++ H V V ++ N+ +++S
Sbjct: 220 LTFNWENRNIVASGSEDKKVKVWDVATGKCKVTMEH--HEKKVHAVAWN-NYTPEVLLSG 276
Query: 498 GWDR 509
DR
Sbjct: 277 SRDR 280
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 605 SLCASGGKDMKAMLWDLNDGKHLHTLDHND 694
++ ASG +D K +WD+ GK T++H++
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHE 257
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 36.3 bits (80), Expect = 0.024
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Frame = +3
Query: 243 GQDFRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLWN-TLAECK 410
G D R ++A ++ F H + SV++++ +++ GS+D+T+KLW+ + E
Sbjct: 346 GFDVRQASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPS 405
Query: 411 YTIQDDGHSDWVSCVRFSPNHANPIIVSCG--------WDRLSRSGISLTVSSR 548
+ ++ + + FSP+ NP +++ G WD LS + +S SR
Sbjct: 406 CIATHNPNAGGLFFIAFSPD--NPFLLAMGGVMGELKLWDTLSDTNVSSRYGSR 457
Score = 34.7 bits (76), Expect = 0.072
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 141
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE 403
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 386
++WD+A G E HTK+V +VA++ ++SGS D+T+ L
Sbjct: 259 KVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVL 303
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 190 I 192
+
Sbjct: 69 V 69
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
+W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 97 VWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 276 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSC 452
G+ ++ H + +V + + ++VSGS D ++KLW + K ++Q GH+D V
Sbjct: 141 GQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKLW----KGKTSLQTLSGHTDTVRG 195
Query: 453 VRFSPN 470
+ P+
Sbjct: 196 LAVMPD 201
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +1
Query: 10 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 189
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 190 I 192
+
Sbjct: 69 V 69
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
+W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 97 VWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 276 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSC 452
G+ ++ H + +V + + ++VSGS D ++KLW + K ++Q GH+D V
Sbjct: 141 GQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKLW----KGKTSLQTLSGHTDTVRG 195
Query: 453 VRFSPN 470
+ P+
Sbjct: 196 LAVMPD 201
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 482
H +V + +S DNR++ SG D + +WN + ++ H+ V + +SP H +
Sbjct: 334 HKSEVCGLKWSYDNRELASGGNDNRLFVWNQ-HSTQPVLKYSEHTAAVKAIAWSP-HVHG 391
Query: 483 IIVSCG 500
++ S G
Sbjct: 392 LLASGG 397
Score = 34.3 bits (75), Expect = 0.095
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 410
HT VL +A S D + IV+G+ D+T++ WN K
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 499
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++WD + K TR E H V ++A+ + + SGSRDK+I + + + + GH
Sbjct: 277 QIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSILQRDIRCQEDHVSKLAGH 334
Query: 435 SDWVSCVRFS 464
V +++S
Sbjct: 335 KSEVCGLKWS 344
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 35.9 bits (79), Expect = 0.031
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN---TLAECKYTIQDDGHSDWVSCVRFS 464
FE ++ + V + SGS DK+I LW T CK+ + GH V C++ S
Sbjct: 312 FETRGHNMAVLCMCVVGEMVCSGSADKSIGLWRREVTGMLCKFGV-IHGHEGPVKCLQAS 370
Query: 465 PNH--ANPIIVSCGWDRLSR 518
PN+ A ++ S G D+ R
Sbjct: 371 PNNVGAGFMLYSGGLDKSLR 390
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 129
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 35.5 bits (78), Expect = 0.041
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 506 QTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASGGKDMKAMLWDL 655
QT+KVW + K +GH+G + ++ P S L SG +D LWDL
Sbjct: 150 QTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 590 VSPDGSLCASGGKDMKAMLWDLNDGK--HLHTLDHNDIITALCFSPTDTGYV 739
+SPDG SG D A +W +N + + H+ +TA+ +SP++ G V
Sbjct: 346 ISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKV 397
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 246 QDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWN 392
Q ++WD+ K T HT V S+ N + VSGSRD LW+
Sbjct: 150 QTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 35.9 bits (79), Expect = 0.031
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +2
Query: 548 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSP 721
+ + GH+G + +++ G ASG D +W++ G+ L ++ I + ++P
Sbjct: 417 LEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNP 474
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPN 470
++ HT V S++ I SGS D ++++W C Q D + + CV ++P
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFD---EAIMCVAWNPL 475
Query: 471 HANPII-VSCGWD 506
P++ V+ G D
Sbjct: 476 SRLPVLAVAMGRD 488
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +3
Query: 222 LRTFRFLGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
L + F LW + HT VL +A S D + S + D+T++LWN
Sbjct: 327 LSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFG 386
Query: 402 E 404
E
Sbjct: 387 E 387
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 413
LG LWD ++G T + ++ V S+ ++ D + G + ++LW+ ++ +
Sbjct: 110 LGDTVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQV 169
Query: 414 TIQDDGHSDWVSCVRFSPNH 473
GH V + ++ NH
Sbjct: 170 RTLRGGHESRVGSLAWN-NH 188
Score = 27.9 bits (59), Expect = 8.3
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
HT++V + +S +++ SG D + +W+
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWD 246
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 410
LW + H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 412 LWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVK 462
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 482
H +V + +S D+R++ SG D + +WN ++ + ++ H+ V + +SP H +
Sbjct: 297 HKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQ-QPILKLTEHTAAVKAITWSP-HQSS 354
Query: 483 IIVSCG 500
++ S G
Sbjct: 355 LLASGG 360
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 500 LGQTVKVWHLTNCKL-KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 676
LG V +W +N K+ K+ LG + + +V + +GS + G + +WD K +
Sbjct: 192 LGTCVYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVR 251
Query: 677 TL 682
T+
Sbjct: 252 TM 253
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 557 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 721
+GH + + S D ASGG D + ++W+ + + + L +H + A+ +SP
Sbjct: 295 VGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSP 350
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 470
+ + H ++ + +S DNR++ SG D + +WN + ++ H+ V + +SP+
Sbjct: 287 KLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQ-HSTQPVLRFCEHAAAVKAIAWSPH 345
Query: 471 H 473
H
Sbjct: 346 H 346
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 410
H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 421 HSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 456
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 434
++WD+ K R E H V ++A+S + + SGSRDK+I + + + + GH
Sbjct: 234 QIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDIRTQEDHVSKLKGH 291
Query: 435 SDWVSCVRFSPNH 473
+ +++S ++
Sbjct: 292 KSEICGLKWSSDN 304
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH-LHTLDHNDIITALCFSPTDTG 733
GH + + S D ASGG D K +W+ + + L +H + A+ +SP G
Sbjct: 290 GHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFG 348
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 35.5 bits (78), Expect = 0.041
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPN 470
E H +V SV+++ + + SRDK++ +W L +Y GH+ V V++ P
Sbjct: 115 EGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP- 173
Query: 471 HANPIIVSCGWD 506
++ SC +D
Sbjct: 174 -TMDVLFSCSYD 184
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 482
H+ V S++F+ ++V+ S D T+K+W T + + ++ W+ S H +
Sbjct: 212 HSSTVWSISFNAAGDKMVTCSDDLTLKIWGT--DIAKMQSGEEYAPWIHLCTLSGYH-DR 268
Query: 483 IIVSCGWDR 509
I S W R
Sbjct: 269 TIYSAHWSR 277
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA---ECKYTIQDDGHSDWVSCVRFSP 467
E HT+ V S A+S + + + S D T +W EC T+ +GH + V V S
Sbjct: 71 ETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTL--EGHENEVKSV--SW 126
Query: 468 NHANPIIVSCGWDR 509
N + + +C D+
Sbjct: 127 NASGSCLATCSRDK 140
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLW-----NTLAECKYTI--QDDGHSDWVSCVRF 461
HT+DV V + + S S D TIK+W + +C T+ ++GHS V + F
Sbjct: 162 HTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISF 221
Query: 462 SPNHANPIIVSCGWD 506
N A +V+C D
Sbjct: 222 --NAAGDKMVTCSDD 234
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 458
K + H KDVL + +S D+ ++SGS D + +W+ + I D H +V V
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVA 102
Query: 459 FSP 467
+ P
Sbjct: 103 WDP 105
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSP 721
SPD + SG D ++WD+N G LD H + + + P
Sbjct: 62 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 105
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 458
K + H KDVL + +S D+ ++SGS D + +W+ + I D H +V V
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVA 161
Query: 459 FSP 467
+ P
Sbjct: 162 WDP 164
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSP 721
SPD + SG D ++WD+N G LD H + + + P
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 164
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 658
H +NT+ SP G L ASG + +W L+
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLH 94
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 458
K + H KDVL + +S D+ ++SGS D + +W+ + I D H +V V
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVA 161
Query: 459 FSP 467
+ P
Sbjct: 162 WDP 164
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 593 SPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSP 721
SPD + SG D ++WD+N G LD H + + + P
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 164
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 658
H +NT+ SP G L ASG + +W L+
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLH 94
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 237 FLGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 404
F LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 349 FTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +3
Query: 240 LGQDFRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY 413
LG LWD ++ T++ +D V S+ ++ D + G + +++W+ ++
Sbjct: 128 LGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHV 187
Query: 414 TIQDDGHSDWVSCVRFSPNH 473
GH V + ++ NH
Sbjct: 188 RTLRGGHESRVGSLAWN-NH 206
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 422
HT++V + +S +++ SG D + +W+ +LA T Q
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQ 275
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 243 GQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
G+ R + + R F+ H V+S+ S N +SGS D++++LW+
Sbjct: 93 GESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 142
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 318 LSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA 476
+ F+ D + ++SGS D T+ WN + + + + VSC++++P A
Sbjct: 248 IEATFTPDGKYVLSGSGDGTLHAWN-IENPSEVARWENNIGVVSCLKWAPRRA 299
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/81 (22%), Positives = 34/81 (41%)
Frame = +2
Query: 413 YHPR*WTQRLGVMCQILTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTV 592
YH + T R+ + C Y + G++++ + + ++ GH + ++ +
Sbjct: 63 YHKKHGTDRVCFTHHPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCM 122
Query: 593 SPDGSLCASGGKDMKAMLWDL 655
SP SG D LWDL
Sbjct: 123 SPINDSFMSGSLDRSVRLWDL 143
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 35.1 bits (77), Expect = 0.054
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +3
Query: 288 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 467
++ + H V +V+F+ D ++SGS D+ + LW+ D GH + + +F P
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
Query: 468 NHANPIIVSCGWDRLSR 518
+ IV+ D+ R
Sbjct: 109 FSDDRTIVTSAADKQVR 125
Score = 35.1 bits (77), Expect = 0.054
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 652
H G +NTV+ + DG + SG D + +LWD
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWD 83
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 35.1 bits (77), Expect = 0.054
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +2
Query: 539 KLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL----DHNDIITA 706
K +H HS ++N + SPDG+ + D K M++D G + L H I A
Sbjct: 42 KFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYA 101
Query: 707 LCFSP 721
+ +SP
Sbjct: 102 VSWSP 106
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD--LNDGKHLHTLDHNDIITALCFSPTD 727
H G L + SPD ++ ASG + +A++WD K + L H I +L +SP +
Sbjct: 355 HRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNN 411
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 470
F+ H++ VLS AF +I + D + ++ K+ HS++V+C+R+SP+
Sbjct: 4 FDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDG-PPFKFHSSHREHSNFVNCIRYSPD 62
Query: 471 HANPIIVS 494
I VS
Sbjct: 63 GTKFITVS 70
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/31 (29%), Positives = 22/31 (70%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
+ H + +V++S D++++++ S DK+ K+W
Sbjct: 93 DGHKGSIYAVSWSPDSKRVLTVSADKSAKVW 123
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 34.7 bits (76), Expect = 0.072
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 258 LWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
LWD + G T+ ++ V S+ ++ D R + G + ++LW++ + + G
Sbjct: 164 LWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGG 223
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H V + ++ NH I+ + G D L
Sbjct: 224 HQSRVGSLAWN-NH---ILTTGGMDGL 246
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVR 458
+ HT++V + +S +Q+ SG D + +W+ ++A T Q + H+ V +
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALA 321
Query: 459 FSPNHANPIIVSCG 500
+ P AN + G
Sbjct: 322 WCPFQANLLATGGG 335
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 222 LRTFRFLGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
L + F LW + HT VL +A S D + S + D+T++ WN
Sbjct: 374 LSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 430
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Frame = +3
Query: 258 LWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVS---GSRDKTIKLWNT 395
+WD ++ TT+ R E+HT V ++A+ +++ G D+TIK WNT
Sbjct: 292 IWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNT 346
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 34.7 bits (76), Expect = 0.072
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 258 LWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
LWD + G T+ ++ V S+ ++ D R + G + ++LW++ + + G
Sbjct: 154 LWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGG 213
Query: 432 HSDWVSCVRFSPNHANPIIVSCGWDRL 512
H V + ++ NH I+ + G D L
Sbjct: 214 HQSRVGSLAWN-NH---ILTTGGMDGL 236
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVR 458
+ HT++V + +S +Q+ SG D + +W+ ++A T Q + H+ V +
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALA 311
Query: 459 FSPNHANPIIVSCG 500
+ P AN + G
Sbjct: 312 WCPFQANLLATGGG 325
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 222 LRTFRFLGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
L + F LW + HT VL +A S D + S + D+T++ WN
Sbjct: 364 LSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 420
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Frame = +3
Query: 258 LWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVS---GSRDKTIKLWNT 395
+WD ++ TT+ R E+HT V ++A+ +++ G D+TIK WNT
Sbjct: 282 IWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNT 336
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 34.3 bits (75), Expect = 0.095
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSGSRDKTIKLW 389
RL+D + K R + H K +V S F+ D R ++S +D T+KLW
Sbjct: 199 RLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLW 245
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 34.3 bits (75), Expect = 0.095
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSGSRDKTIKLW 389
RL+D + K R + H K +V S F+ D R ++S +D T+KLW
Sbjct: 291 RLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLW 337
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 34.3 bits (75), Expect = 0.095
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 548 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSP 721
+ H +N ++SPDG L A G + + ++ D N GK L TL H D A + P
Sbjct: 271 VKHFRFPWPVNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHP 329
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.095
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 13 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 162
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.095
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 13 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 162
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.3 bits (75), Expect = 0.095
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 22 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 126
TL GH G V Q+A +PK+ ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK 86
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLWN 392
++DL A + + R HT DV +V F+ ++ I+SGS D K+W+
Sbjct: 255 VYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWD 300
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H + V + D R +S +D+TIKLW+
Sbjct: 317 HLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
KT H V +A S DN +V+GSRD T+ LW
Sbjct: 2659 KTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 658
GH + + +SPD + +G +D +LW ++
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIH 2698
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 22 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 126
TL GH G V ++A +PKY ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = +3
Query: 348 QIVSGSRDKTIKLWNTL-----AECKYTIQDDGHSDWVSCVRFSPNHANP 482
++ SG D T+K+W +C +Q H+DWV V ++PN P
Sbjct: 178 KLASGGCDNTVKVWKLANGSWKMDCFPALQK--HTDWVRDVAWAPNLGLP 225
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
HT D+ SV FS D R ++S S D ++K+W+
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWD 401
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +1
Query: 136 DENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKT 252
+EN Y IP + +L GH+ +S + + S G LSGS+D T
Sbjct: 159 EENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYT 200
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
RL L K R F+ H V+S++ +SGS D+T+ LW+ E C+ ++ G
Sbjct: 103 RLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQG 162
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDG 431
RL L K R F+ H V+S++ +SGS D+T+ LW+ E C+ ++ G
Sbjct: 100 RLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQG 159
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
LRGH V ++ N ++ + RDK++ +W++ +E++ L GHS + V+
Sbjct: 88 LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVL 146
Query: 205 LSSDGNYALSGSWDKT 252
+ S S+D T
Sbjct: 147 WHPTMDVLFSCSYDNT 162
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 126
L GH V +A NP +I S S DKT+ +W+
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
GH + +V+ + GSL A+ G+D +W++
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWEI 121
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD----DGHSDWVSCVRFSPN 470
H +V SV+++ + + RDK++ +W E GHS+ V V + P
Sbjct: 91 HESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHP- 149
Query: 471 HANPIIVSCGWD 506
++ SC +D
Sbjct: 150 -TMDVLFSCSYD 160
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 252 FRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 428
F L KT R H + S+A +D I SGS D ++++W+ + +C T++
Sbjct: 239 FDLTGFQKEKTEFRLWGHEGPITSLA--LDMTSIFSGSWDMSVRIWDRSSMKCVKTLR-- 294
Query: 429 GHSDWV 446
HSDWV
Sbjct: 295 -HSDWV 299
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITAL 709
GH G + ++ + D + SG DM +WD + K + TL H+D + L
Sbjct: 255 GHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTLRHSDWVWGL 302
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTI 380
++WD+A G E HTK+V +VA++ ++SGS D+T+
Sbjct: 291 KVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTV 333
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/75 (26%), Positives = 39/75 (52%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 470
+ + H V + FS ++ QI++ S+D +I++WN +Y + +D + V + +
Sbjct: 284 QLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN--INVRYHLDEDPKTLKVFPIPLCDS 341
Query: 471 HANPIIVSCGWDRLS 515
NP+ +DRLS
Sbjct: 342 GGNPL----HYDRLS 352
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 455
H + +A S D R + SGS DKT K+W +++ + + H D V+ V
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWR-VSDLRCVESVNAHEDAVNAV 259
Score = 30.7 bits (66), Expect(2) = 0.31
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 172 YGHSHFISDVVLSSDGNYALSGSWDKTF 255
+ H IS + LS D SGSWDKTF
Sbjct: 208 FRHLDAISCLALSEDKRLLYSGSWDKTF 235
Score = 20.6 bits (41), Expect(2) = 0.31
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 79 DMILSSSRDKTLIVWKLTRDENN 147
D I + +D + VWK E+N
Sbjct: 147 DKIFTGHQDGKIRVWKAASKESN 169
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
+ H G V Q+ +P + ++ SS D+ L+VW L R
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNR 336
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 563 HSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLN 658
H G + V P+ ++ AS G+D + M+WDLN
Sbjct: 303 HEGEVFQVEWDPNHETVLASSGEDRRLMVWDLN 335
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 123
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 123
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 297 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQ 422
E H+ +V F+V + + SGS DKTIK+W NTL +C T++
Sbjct: 255 EGHSGEV--TCFAVGGQMLYSGSVDKTIKMWDLNTL-QCIMTLK 295
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITAL 709
GHSG + V G + SG D +WDLN + + TL H +T+L
Sbjct: 256 GHSGEVTCFAVG--GQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSL 304
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 129
+ K +L GH+G VT A + M+ S S DKT+ +W L
Sbjct: 246 DPFKYLTSLEGHSGEVTCFAVGGQ---MLYSGSVDKTIKMWDL 285
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 309 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 485
+ ++ AFS D R + S D T+K+ + C + + WV VRF P+H+
Sbjct: 107 RSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWV--VRFHPHHSE-- 162
Query: 486 IVSCG 500
IV+ G
Sbjct: 163 IVASG 167
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWN-TLAEC 407
++ D G + H + V F + +IV SGS D ++LWN T +EC
Sbjct: 131 KIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTTSEC 183
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +2
Query: 551 NHL---GHSGYLNTVTVS-PDGSLCA-SGGKDMKAMLWDLNDGKHLHTLD-HNDIITALC 712
NHL H+G +N + S P+ LC + G+D +WD G LHT + H + ++C
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVC 515
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTL 398
H +V +AFS N+Q +V+ DKTIK+W+ +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAV 496
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 389
G+D ++WD G FE H V SV +N Q I S + D IK W
Sbjct: 485 GEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +2
Query: 551 NHL---GHSGYLNTVTVS-PDGSLCA-SGGKDMKAMLWDLNDGKHLHTLD-HNDIITALC 712
NHL H+G +N + S P+ LC + G+D +WD G LHT + H + ++C
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVC 515
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTL 398
H +V +AFS N+Q +V+ DKTIK+W+ +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAV 496
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +3
Query: 243 GQD--FRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 389
G+D ++WD G FE H V SV +N Q I S + D IK W
Sbjct: 485 GEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 667
HS +N + S DG+ SGG++ ++W L+ GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +3
Query: 222 LRTFRFLGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
L + F LW + HT VL +A S + + S + D+ ++LWN
Sbjct: 358 LSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFG 417
Query: 402 E 404
E
Sbjct: 418 E 418
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +3
Query: 222 LRTFRFLGQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 401
L + F LW + HT VL +A S + + S + D+ ++LWN
Sbjct: 360 LSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFG 419
Query: 402 E 404
E
Sbjct: 420 E 420
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 422
HT++V + +S + SG D + +W+ +LA K T Q
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQ 291
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 28 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 135
L H G V Q+ +P + ++ SS D+ L+VW + R
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINR 337
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 129
+L GH V +I T P P +++++S+D+++ +W +
Sbjct: 123 SLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQDD- 428
+++D+ R H+ V + V D +VSG D +K W+ T+ D
Sbjct: 118 QVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGA---TVISDL 174
Query: 429 -GHSDWVSCVRFSP 467
GH D+V C SP
Sbjct: 175 LGHKDYVRCGDCSP 188
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 512 VKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 652
VK W + + + LGH Y+ SP + S+ +G D +WD
Sbjct: 160 VKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWD 207
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
+ WD+A H V S V++ +V+GS D T+K+W+ I +
Sbjct: 161 KYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEIN 220
Query: 432 HSDWVSCVRFSPN 470
H V V + P+
Sbjct: 221 HGLPVEDVVYLPS 233
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD-HNDIITALCFSP 721
+N ++SPDG L G + +++L D N GK L TL H D A + P
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHP 327
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H K V V +S Q+++GS DKTIK W+
Sbjct: 96 HEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +1
Query: 7 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 186
L+ + +++ H+ V IA + + + S D+ + VW E + + L H
Sbjct: 225 LRCKESIKAHDDAVNAIAVSTN--GTVYTGSADRRIRVWAKPTGEKRHTLVAT-LEKHKS 281
Query: 187 FISDVVLSSDGNYALSGSWDKTFV 258
++ + L+ DG+ SGS D++ +
Sbjct: 282 AVNALALNDDGSVLFSGSCDRSIL 305
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 7 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 144
+ +RG LRGH+ + + D++LS S D+T+ +W+ D +
Sbjct: 316 MAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPDSS 358
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 327 AFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPN 470
A +V + I S S DKT+K+W CK +I+ H D V+ + S N
Sbjct: 200 ALAVSDGFIYSVSWDKTLKIWRASDLRCKESIK--AHDDAVNAIAVSTN 246
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHS 437
H K +LS+ F+V + ++SGS D+T+++W + Y+ + GH+
Sbjct: 325 HDKAILSL-FNVSDL-LLSGSADRTVRIWRRGPDSSYSCLEVLSGHT 369
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 661
H +N + ++ DGS+ SG D ++W+ D
Sbjct: 279 HKSAVNALALNDDGSVLFSGSCDRSILVWERED 311
>At4g39753.1 68417.m05629 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 390
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 470 SCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 637
SC+P+ LW +K W L +NH SG + TV DG+L K K
Sbjct: 285 SCRPN-SFLWFDNEIKNWRLIKGLSSLNHSCRSGLIETVCY--DGNLLLLWDKPTK 337
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
LW++ K R + H+ V + FS D+ ++S SRD+ +++
Sbjct: 631 LWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFS 675
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +1
Query: 25 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 129
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 279 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
K + E H + + + +++ Q + SRDKT+K+W+
Sbjct: 687 KLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWS 724
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 545 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLD--HNDIITALCFS 718
K + H ++++ +S DGSL S D +W +D K L +++ H+D I A+ S
Sbjct: 185 KCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVS 244
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 19 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 198
G LRGH + +A D++LS S DK+L VW+ E L GH+ +
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKS 378
Query: 199 VVLS---SDGN 222
+ +S SD N
Sbjct: 379 LAVSVSDSDSN 389
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 178 HSHFISDVVLSSDGNYALSGSWDKTF 255
H +S + LS DG+ S SWD++F
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSF 216
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +2
Query: 512 VKVWHLTNCK--LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD--LN-DGKHLH 676
+KVW+ + K L H +N + +S DG + SG D ++W+ +N D + LH
Sbjct: 258 IKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELH 317
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H K V V +S Q+++GS DKT+K W+
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFED-HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 431
R WD + + R + + +++ S ++ +++G + + LW+ + ++
Sbjct: 112 RSWDTRSFQQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSKQVACLEES 171
Query: 432 HSDWVSCVRFSPNHANPII 488
H D V+ V F PN N ++
Sbjct: 172 HMDDVTQVHFVPNKPNKLL 190
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
++W +A K H V SV S + SGS D T+K W + KYT
Sbjct: 231 KVWRIADSKCLESIPAHDDAVNSVV-STTEAIVFSGSADGTVKAWKRDQQGKYT 283
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 446 VMCQILTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 625
V C L Y W +T+KVW + + K + H +N+V VS ++ SG
Sbjct: 209 VSCLSLNDEQGLLYSASW-DRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEAIVFSGS 266
Query: 626 KDMKAMLWDLN-DGKHL-HTL 682
D W + GK+ HTL
Sbjct: 267 ADGTVKAWKRDQQGKYTKHTL 287
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 721
+N +VSPDG L A G + ++ D + GK + +L H D A + P
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHP 300
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL-NDGKHLHTLDHN-DIITALCFSP 721
GH Y P+G + A+G +D LWD+ N + L N I L F+P
Sbjct: 288 GHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTP 343
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 309 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 485
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P H+
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHSE-- 159
Query: 486 IVSCG 500
IV+ G
Sbjct: 160 IVASG 164
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNT-LAEC 407
++ D GK + H + V F + +IV SGS D ++LWN EC
Sbjct: 128 KIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGEC 180
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 309 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 485
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P H+
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHSE-- 159
Query: 486 IVSCG 500
IV+ G
Sbjct: 160 IVASG 164
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNT-LAEC 407
++ D GK + H + V F + +IV SGS D ++LWN EC
Sbjct: 128 KIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGEC 180
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 303 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 440
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 294
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 303 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 440
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 320
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 536 CKLKINHLGHSGYLNTVTVSPDGSL-CASGGKDMKAMLWDLNDGKHLHTLD 685
C K GH+ ++V P +GG D K +LWD + G+ +D
Sbjct: 138 CLYKTLRAGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSKGRSQKIID 188
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
H+K V V F VD+ +VS S D T+KLW+
Sbjct: 703 HSKTVSYVKF-VDSSTLVSSSTDNTLKLWD 731
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +1
Query: 22 TLRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFI 192
T+ GH+ V+ + K+ D ++SSS D TL +W L+ + P GH++
Sbjct: 699 TMIGHSKTVSYV----KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLK 754
Query: 193 SDVVLS-SDGNYALSGSWDKTFV 258
+ V LS SDG A ++ FV
Sbjct: 755 NFVGLSVSDGYIATGSETNEVFV 777
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKT 377
++WD+A + ++H K V S+ S D + SGS D T
Sbjct: 609 QIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT 650
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPN 470
H V +A S D + S S D+T+K+W T +C + + H D ++ V S N
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESF-TNAHDDAINAVALSEN 219
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Frame = +2
Query: 506 QTVKVWHLT----NCKLKINHL------GHSGYLNTVTVS-PDGSLCASGGKDMKAMLWD 652
Q +KVW N K K H H+ +N + +S +GSL SGG D ++W+
Sbjct: 229 QRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWE 288
Query: 653 LNDG 664
+DG
Sbjct: 289 RDDG 292
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 25 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 204
L HN + +A + ++ S D +++VW+ RD+ + L GH+ + +
Sbjct: 255 LSEHNSGINALALSGTNGSLLHSGGSDGSILVWE--RDDGGDIVVVGMLRGHTESVLCLA 312
Query: 205 LSSDGNYALSGSWDKT 252
+ SD SGS DKT
Sbjct: 313 VVSD--ILCSGSADKT 326
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCV 455
HT+ VL +A D + SGS DKT++LW A + +GH V C+
Sbjct: 304 HTESVLCLAVVSDI--LCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCL 353
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 658
TV+ W + L H H G +NT+ +P + S G D + +L+ L+
Sbjct: 270 TVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKLS 319
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 587 TVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDI--ITALCF 715
TV+ G ASGG D L+DL L + LDHN ITAL F
Sbjct: 46 TVACSGPAAASGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSF 91
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +2
Query: 509 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL 682
T+K W L + L GH ++T+ V + SG D LW L+D L L
Sbjct: 608 TIKAWSLQDGSLLCTMSGHKSVVSTLVVV--NGVLYSGSWDGTVRLWSLSDNSLLTVL 663
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 721
+N ++SPDG L A G D +L D ++G+ + TL H D A + P
Sbjct: 280 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHP 329
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
D L D + G+T + H + A+ + +G++DKT ++W+T +
Sbjct: 300 DGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLK 359
Query: 429 GHSDWVSCVRFS 464
G+ V +RF+
Sbjct: 360 GNLGAVRSIRFT 371
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 575 LNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTL-DHNDIITALCFSP 721
+N ++SPDG L A G D +L D ++G+ + TL H D A + P
Sbjct: 274 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHP 323
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +3
Query: 249 DFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
D L D + G+T + H + A+ + +G++DKT ++W+T +
Sbjct: 294 DGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLK 353
Query: 429 GHSDWVSCVRFS 464
G+ V +RF+
Sbjct: 354 GNLGAVRSIRFT 365
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 330 FSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQ 422
F V + SGS DKTIK+W NTL +C+ T++
Sbjct: 318 FVVGGEVLYSGSVDKTIKVWDLNTL-QCRMTLK 349
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 276 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
G ++H V +A S D+ VS S D T+K+W++
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHL 673
H+ + VS DG A+GG D LWD+ +H+
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHV 241
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 294 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
F H V S+ F ++ SGS D T+ +WN
Sbjct: 259 FTGHCGIVSSLCFREGTAELFSGSYDGTLSIWN 291
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 13 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 177
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Frame = +3
Query: 267 LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH---- 434
L++ K + E H + + +AFS +VS D + LW+T + K T ++
Sbjct: 498 LSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKLTSKNSTRKFCN 557
Query: 435 ------SDWVSCVRFSPNHANPIIVSCGW 503
+ V+ ++F P ++V GW
Sbjct: 558 RSNLESTSLVTHIQFDPYQIELLVVHDGW 586
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 30.3 bits (65), Expect = 1.5
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Frame = +2
Query: 446 VMCQILTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 625
V C L + Y W +T+KVW L++ K + H +NTV VS L +G
Sbjct: 248 VSCLSLNEDLGLLYSGSW-DKTLKVWRLSDSKCLESIEAHDDAVNTV-VSGFDDLVFTGS 305
Query: 626 KDMKAMLWDLN-DGKHL-HTL-----DHNDIITALCFSPTD 727
D +W GK + H L + +TAL + TD
Sbjct: 306 ADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTD 346
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 455
H V ++ + D + SGS DKT+K+W L++ K + H D V+ V
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWR-LSDSKCLESIEAHDDAVNTV 293
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
++W L+ K E H V +V D+ + +GS D T+K+W
Sbjct: 270 KVWRLSDSKCLESIEAHDDAVNTVVSGFDDL-VFTGSADGTLKVW 313
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLH 676
H G + + P SL +G KD + LWD K +H
Sbjct: 2374 HLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLIH 2411
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
++W L +G H + ++A+ + +GS DKT+K W+T
Sbjct: 97 KMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDT 143
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
++WD A G FE H V SV + + + I S + D IK W + D
Sbjct: 489 KVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW-LYDNMGSRVDYD 547
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSRSGI 527
W + + +S + + SCG + S I
Sbjct: 548 APGRWCTTMAYSADGTR--LFSCGTSKDGESFI 578
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPN 470
H V ++FS N+Q +++ DKTIK+W+ K +T + + C + N
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKEN 519
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
+++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 902 QIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 428
++WD A G FE H V SV + + + I S + D IK W + D
Sbjct: 489 KVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW-LYDNMGSRVDYD 547
Query: 429 GHSDWVSCVRFSPNHANPIIVSCGWDRLSRSGI 527
W + + +S + + SCG + S I
Sbjct: 548 APGRWCTTMAYSADGTR--LFSCGTSKDGESFI 578
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 303 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPN 470
H V ++FS N+Q +++ DKTIK+W+ K +T + + C + N
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKEN 519
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
+++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 902 QIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 530 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHT-LDHNDII-T 703
T K I L +G + ++ S DG S G D + +WDL K L+ +D T
Sbjct: 362 TKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGT 421
Query: 704 ALCFS 718
+LC S
Sbjct: 422 SLCSS 426
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 503 GQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG-KDMKAMLWDL 655
GQT ++ N +L G G + V S DG+ +GG KD + WD+
Sbjct: 234 GQTTGIYREDNMELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDI 285
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +2
Query: 446 VMCQILTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 625
V C L + Y W +T+KVW L++ K + H +NTV D L +G
Sbjct: 252 VSCLSLNEELGLLYSGSW-DKTLKVWRLSDSKCLESIQAHDDAINTVAAGFD-DLLFTGS 309
Query: 626 KDMKAMLW 649
D +W
Sbjct: 310 ADGTLKVW 317
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/83 (27%), Positives = 30/83 (36%)
Frame = +1
Query: 4 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 183
T+ RG GH V +A +P S D LI+W N +K
Sbjct: 281 TVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADL 340
Query: 184 HFISDVVLSSDGNYALSGSWDKT 252
H + D N L+GS D T
Sbjct: 341 HCVD--WNPHDDNLILTGSADNT 361
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +3
Query: 258 LWDLAAGKT--TRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWNTLAECKYTIQD- 425
LWD G T+ + H D+ V ++ D+ I++GS D T++L++ +
Sbjct: 319 LWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSP 378
Query: 426 ----DGHSDWVSCVRFSPNHAN 479
+GH V CV++SP+ ++
Sbjct: 379 IYKFEGHKAAVLCVQWSPDKSS 400
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 560 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL-NDGKHLHTLDHN-DIITALCFS 718
GH Y + P+G + A+G +D LWD+ N + L L N I AL F+
Sbjct: 317 GHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFT 371
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 258 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
L D +GK E H S A+ + + + +G++D T +LW+
Sbjct: 303 LADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWD 347
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKH 670
H G + + + DG S G D + LWD+ G++
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRN 346
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/68 (22%), Positives = 32/68 (47%)
Frame = +1
Query: 46 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 225
++ ++ +PK D+++++S D + W++TR + + K H + DG
Sbjct: 29 ISSLSFSPK-ADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTT 87
Query: 226 ALSGSWDK 249
+G DK
Sbjct: 88 VFTGGCDK 95
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 237 FLGQDFRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
F R+W++ T ++ +H V + S ++SGS DKTI++W
Sbjct: 870 FSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVW 922
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +2
Query: 446 VMCQILTQSCQPHYCILWLGQTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 625
V C L + Y W +TVKVW + + K + H +N+VT + SL +G
Sbjct: 138 VSCLSLAEDQGLLYSASW-DRTVKVWRIHDLKCIESIKAHDDAVNSVTTAE--SLVFTGS 194
Query: 626 KDMKAMLW 649
D +W
Sbjct: 195 ADGTVKVW 202
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 655
H N V+ SPD L AS +D LW L
Sbjct: 349 HRATCNAVSYSPDCELMASASEDATVALWKL 379
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 563 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGK 667
HS + + S DG+L SG K ++W+L GK
Sbjct: 245 HSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK 279
>At1g63360.1 68414.m07162 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 884
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 647 WDLNDGKHLHTLDHNDIIT 703
WDLN K L TL+H +I+T
Sbjct: 652 WDLNTVKELETLEHLEILT 670
>At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 893
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 647 WDLNDGKHLHTLDHNDIIT 703
WDLN K L TL+H +I+T
Sbjct: 654 WDLNTVKELETLEHLEILT 672
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 100 RDKTLIVWKLTRDENNYGIPQKRLYGHSH 186
R+ ++++KL R+E +Y + + LYG H
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299
>At5g13850.1 68418.m01619 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 159
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 654 RSHNIAFMSLPPDAHKEPSGDTVTVF 577
+S NI F+ PD K P+ DT +F
Sbjct: 84 KSKNILFVISKPDVFKSPASDTYVIF 109
>At5g08250.1 68418.m00969 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 488
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 187 FISDVVLSSDGNYALSGSWDKTFVCGISLQAR 282
++SDV++S +G + G W T C ++ R
Sbjct: 24 WLSDVLISQNGTFRFRGPWFSTLNCVVTCDPR 55
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 416
++W +A K H + SV D+ + +GS D T+K+W + K T
Sbjct: 260 KVWRIADSKCLESIHAHDDAINSVMSGFDDL-VFTGSADGTVKVWKRELQGKGT 312
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 7 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQKRL 171
L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P +
Sbjct: 3314 LRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVV 3372
Query: 172 Y 174
Y
Sbjct: 3373 Y 3373
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +2
Query: 542 LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDGKHLHTLDHNDIITALCFSP 721
L+ +HL YL T +P+G A+ G D + +LWD++ + + + I + + P
Sbjct: 233 LRGDHLEAICYL---TWAPNGKYIATSGLDKQVLLWDVDKKQDIDRHKFEERICCMSWKP 289
>At3g12390.1 68416.m01544 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 203
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 654 RSHNIAFMSLPPDAHKEPSGDTVTVF 577
+S NI F+ PD K P+ DT +F
Sbjct: 88 KSKNILFVISKPDVFKSPASDTYVIF 113
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 306 TKDVLSVAFSVDNRQIVSGSRDKTIKLWN 392
T LSV +S D ++I SGS D I+ W+
Sbjct: 198 TGRALSVTWSADAQRIFSGSSDGLIRCWD 226
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 1 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 123
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 VAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQD 425
V V ++ SGS DKTIK+W+ +C T+ D
Sbjct: 278 VTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTD 312
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = +3
Query: 243 GQDFRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 422
GQ ++WDL ++ + HT + V ++ + + S S + + N + + T
Sbjct: 114 GQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATEL 173
Query: 423 DDGHSDWVSCVRFSPNHANPIIVSCGWD 506
D + + + +S + ++V+ G D
Sbjct: 174 KDPNGQVLRLLDYS-RSSRHLLVTAGDD 200
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 291 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 389
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
+++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 891 QIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +3
Query: 255 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 395
+++++ + + + H+K + +AFS +VS D + +WNT
Sbjct: 891 QIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,534,990
Number of Sequences: 28952
Number of extensions: 446867
Number of successful extensions: 2494
Number of sequences better than 10.0: 211
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2427
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -