Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00150
         (503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...   154   5e-40
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...   154   5e-40
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...   130   7e-33
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...   128   4e-32
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.1  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   2.7  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   6.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.3  

>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score =  154 bits (373), Expect = 5e-40
 Identities = 75/76 (98%), Positives = 75/76 (98%)
 Frame = +3

Query: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score =  154 bits (373), Expect = 5e-40
 Identities = 75/76 (98%), Positives = 75/76 (98%)
 Frame = +3

Query: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  154 bits (373), Expect = 5e-40
 Identities = 75/76 (98%), Positives = 75/76 (98%)
 Frame = +3

Query: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  154 bits (373), Expect = 5e-40
 Identities = 75/76 (98%), Positives = 75/76 (98%)
 Frame = +3

Query: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score =  154 bits (373), Expect = 5e-40
 Identities = 75/76 (98%), Positives = 75/76 (98%)
 Frame = +3

Query: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304



 Score =  154 bits (373), Expect = 5e-40
 Identities = 75/76 (98%), Positives = 75/76 (98%)
 Frame = +3

Query: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380



 Score =  154 bits (373), Expect = 5e-40
 Identities = 75/76 (98%), Positives = 75/76 (98%)
 Frame = +3

Query: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532



 Score =  154 bits (373), Expect = 5e-40
 Identities = 75/76 (98%), Positives = 75/76 (98%)
 Frame = +3

Query: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608



 Score =  154 bits (373), Expect = 5e-40
 Identities = 75/76 (98%), Positives = 75/76 (98%)
 Frame = +3

Query: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684



 Score =  151 bits (367), Expect = 3e-39
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = +3

Query: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 440

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score =  130 bits (314), Expect = 7e-33
 Identities = 63/64 (98%), Positives = 63/64 (98%)
 Frame = +3

Query: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 189 IQKE 200
           IQKE
Sbjct: 61  IQKE 64


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score =  128 bits (308), Expect = 4e-32
 Identities = 62/64 (96%), Positives = 62/64 (96%)
 Frame = +3

Query: 9   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYN
Sbjct: 49  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 108

Query: 189 IQKE 200
           IQKE
Sbjct: 109 IQKE 112



 Score =  102 bits (245), Expect = 2e-24
 Identities = 48/48 (100%), Positives = 48/48 (100%)
 Frame = +3

Query: 93  KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 236
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 1   KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 48


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/15 (53%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
 Frame = -2

Query: 163  SSNCF-PAKMRRCWS 122
            S+ CF P+K+R CW+
Sbjct: 1112 SNRCFFPSKIRICWN 1126


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 323 EDEDGHSIYGKSFSHSYTSWRECKGRFN 240
           + ED H ++     H    W E + +FN
Sbjct: 77  QKEDVHKVFQHLMIHRPNWWHELETKFN 104


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 122 RPTTSHLCRETIRRWPHSFRL*HPERIHT 208
           +P    +C+   R++  S+ L   ER HT
Sbjct: 75  KPKRQFICKYCNRQFTKSYNLLIHERTHT 103


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 140 DETLLVWRNTFLVLDFSF 87
           D  ++  R +FLV DF F
Sbjct: 479 DAAMMALRTSFLVNDFGF 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,889
Number of Sequences: 336
Number of extensions: 2653
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)