Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00149
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 132 9e-30
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 125 1e-27
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 115 1e-24
UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3; Eukaryo... 89 9e-17
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 88 2e-16
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 85 1e-15
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 84 3e-15
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 81 2e-14
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 64 3e-09
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 63 7e-09
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 62 9e-09
UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein ... 46 6e-04
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 45 0.001
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 45 0.001
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 44 0.004
UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725... 43 0.008
UniRef50_Q7QNU1 Cluster: GLP_157_10563_10210; n=1; Giardia lambl... 42 0.013
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 41 0.030
UniRef50_Q6ZWG3 Cluster: CDNA FLJ41135 fis, clone BRACE2028970; ... 36 0.86
UniRef50_Q88XE2 Cluster: Transcription regulator; n=1; Lactobaci... 34 3.5
UniRef50_A5DWM5 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 33 8.0
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 132 bits (318), Expect = 9e-30
Identities = 60/89 (67%), Positives = 67/89 (75%)
Frame = +2
Query: 2 YIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYXXXXXX 181
Y+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+
Sbjct: 6 YMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFVIYRIR 65
Query: 182 XXXXXXXXPVAKGATYGKHKSHGVTS*SP 268
PV KG TYGK KSHGV P
Sbjct: 66 VRRGGRKRPVPKGCTYGKPKSHGVNQLKP 94
Score = 123 bits (296), Expect = 4e-27
Identities = 58/99 (58%), Positives = 68/99 (68%)
Frame = +1
Query: 217 GCHLWQA*EPWCHQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDP 396
GC + +QLKP R LQSIAEE +SYW+AQD+SYKYFEVIL+D
Sbjct: 78 GCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDT 137
Query: 397 SHKAISRDPKINWIVNAVHKHREMRGLTSAGRSSRGLAR 513
H AI RDPKINWI VHKHRE+RGLTSAG+SSRG+ +
Sbjct: 138 HHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGK 176
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 510 KGHRYSQTKGGSRRAAWLRRNTLQLRRKR 596
KG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 176 KGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 125 bits (301), Expect = 1e-27
Identities = 59/84 (70%), Positives = 63/84 (75%)
Frame = +2
Query: 2 YIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYXXXXXX 181
YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQGY
Sbjct: 6 YIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIR 65
Query: 182 XXXXXXXXPVAKGATYGKHKSHGV 253
PV KGATYGK HGV
Sbjct: 66 VRRGGRKRPVPKGATYGKPVHHGV 89
Score = 113 bits (272), Expect = 4e-24
Identities = 52/87 (59%), Positives = 62/87 (71%)
Frame = +1
Query: 253 HQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAISRDPKIN 432
+QLK R+LQS+AEE +SYWV +DS+YK+FEVIL+DP HKAI R+P
Sbjct: 90 NQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQ 149
Query: 433 WIVNAVHKHREMRGLTSAGRSSRGLAR 513
WI VHKHREMRGLTSAGR SRGL +
Sbjct: 150 WITKPVHKHREMRGLTSAGRKSRGLGK 176
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +3
Query: 510 KGHRYSQTKGGSRRAAWLRRNTLQLRRKR 596
KGH++ T GGSRRAAW RRNTLQL R R
Sbjct: 176 KGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 115 bits (276), Expect = 1e-24
Identities = 50/84 (59%), Positives = 61/84 (72%)
Frame = +2
Query: 2 YIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYXXXXXX 181
Y+QE++RKK SD +R+LLR+R W YRQL+ +HR PRPTRP+KARRLGYRAKQG+
Sbjct: 6 YMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGFVVYRVR 65
Query: 182 XXXXXXXXPVAKGATYGKHKSHGV 253
PV KG TYGK K+HGV
Sbjct: 66 VRRGNRKRPVCKGQTYGKPKTHGV 89
Score = 103 bits (247), Expect = 4e-21
Identities = 45/87 (51%), Positives = 60/87 (68%)
Frame = +1
Query: 253 HQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAISRDPKIN 432
++LK ++ Q++AE +SYWVA+DS+YK++EV+L+DP HKAI R+P
Sbjct: 90 NELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLIDPFHKAIRRNPDTQ 149
Query: 433 WIVNAVHKHREMRGLTSAGRSSRGLAR 513
WI VHKHRE RGLTSAGR SRGL +
Sbjct: 150 WITKPVHKHREQRGLTSAGRKSRGLGK 176
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 510 KGHRYSQTKGGSRRAAWLRRNTLQLRRKR 596
KG R+S T+GGS+ W R+NT RKR
Sbjct: 176 KGWRFSATRGGSQAKNWKRKNTKVFHRKR 204
>UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3;
Eukaryota|Rep: 60S ribosomal protein L15 - Brugia
pahangi (Filarial nematode worm)
Length = 71
Score = 89.0 bits (211), Expect = 9e-17
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = +2
Query: 2 YIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 163
Y+QEL+RKK S+ MR+LLR+R WQYRQLT +HR RPTRP+KARRLGY + +GY
Sbjct: 6 YMQELWRKKKSETMRYLLRIRCWQYRQLTAIHRVSRPTRPEKARRLGYLSNEGY 59
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/81 (51%), Positives = 49/81 (60%)
Frame = +1
Query: 265 PTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAISRDPKINWIVN 444
P ++LQ IAEE +SYWV +D YK+FEVI+VDP H I DPKI WI
Sbjct: 92 PKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIAL 151
Query: 445 AVHKHREMRGLTSAGRSSRGL 507
HK R RGLTSAG+ RGL
Sbjct: 152 KHHKGRVFRGLTSAGKKGRGL 172
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +2
Query: 2 YIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 163
YI+E ++ + LL+ R+ ++R+ + R RPTR D+AR LGY+AKQGY
Sbjct: 6 YIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQGY 59
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/79 (50%), Positives = 49/79 (62%)
Frame = +1
Query: 271 RNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAISRDPKINWIVNAV 450
+NLQ IAEE +SYWV +D S K+FE IL+DP H AI D +NWI +
Sbjct: 96 KNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLNWICDDS 155
Query: 451 HKHREMRGLTSAGRSSRGL 507
HK+R RG TSAGR +RGL
Sbjct: 156 HKNRVFRGKTSAGRRARGL 174
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/35 (57%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
Frame = +2
Query: 68 WQYRQLTR----MHRAPRPTRPDKARRLGYRAKQG 160
WQ +Q R + R RPTR DKAR LGY+AKQG
Sbjct: 26 WQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQG 60
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 83.8 bits (198), Expect = 3e-15
Identities = 38/83 (45%), Positives = 50/83 (60%)
Frame = +1
Query: 265 PTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAISRDPKINWIVN 444
P ++ + IAEE +SYWVA+D Y+++EVILVDP H AI DP++ WI
Sbjct: 114 PAKSTRLIAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHPAICSDPELKWICE 173
Query: 445 AVHKHREMRGLTSAGRSSRGLAR 513
H+ R RG TSAGR RGL +
Sbjct: 174 KQHRGRVFRGKTSAGRKMRGLLK 196
Score = 40.7 bits (91), Expect = 0.030
Identities = 18/53 (33%), Positives = 34/53 (64%)
Frame = +2
Query: 2 YIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 160
+++E +++ L++ R+ ++R+ + R +PTR D+AR LGY+AKQG
Sbjct: 28 FLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAKQG 80
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/83 (44%), Positives = 53/83 (63%)
Frame = +1
Query: 265 PTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAISRDPKINWIVN 444
P++ + IAEE SY+VA+D YKY+EVI+VD SH I DP++ W+ +
Sbjct: 92 PSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMVDYSHPVIRSDPELKWLQD 151
Query: 445 AVHKHREMRGLTSAGRSSRGLAR 513
+V++ R RGLTSAG+ SRGL +
Sbjct: 152 SVNRKRVFRGLTSAGQKSRGLTK 174
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +2
Query: 2 YIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGY 163
YI++ ++ K D R +LR R+ ++R+ + R RPTR ++AR LGY+AKQG+
Sbjct: 8 YIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQGF 59
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 64.1 bits (149), Expect = 3e-09
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Frame = -1
Query: 492 ATSRSQTTHLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXX 313
A +R Q THL++L+ DP+ +R++++ + ++EDNL+ + I NPV Q
Sbjct: 13 AANRCQPTHLSVLVDWFGDPLGVRLSSDSFMEWINEDNLKKFICEIFTNPVGIQDSQSST 72
Query: 312 XXXXTFLSNGLKVARGLQLVTPWLLCLP*VAPL-------ATGRLRPPRRTRILNTM*PC 154
+FLSN LK + +QLV + L L T P + T +L+ +
Sbjct: 73 MVPSSFLSNRLKASGKVQLVNTVVNRLAISCTLRKWAFSTTTADTNPVKDTTLLSLV--- 129
Query: 153 LAR*PSLRALSGLVGLGARCIRVN*RYCHTLTRNKKRITSLSFFLYNS 10
S +LSG +G GA N +YC T +K I S FFL++S
Sbjct: 130 -----SQPSLSGWMGWGALYSAENWQYCQQWTLRRKHIMSDCFFLHSS 172
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +1
Query: 274 NLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAISRDPKINWIVNAVH 453
NLQ +AE+ SYWV +D+ YK+FEV+++DPSH AI DP W+V +
Sbjct: 95 NLQVVAEQRAARRFSNLEVLGSYWVGEDAMYKWFEVVMIDPSHPAIRNDPDYAWVVGKEY 154
Query: 454 KH-REMRGLTSAGR 492
+ R +R + R
Sbjct: 155 REGRRIRRIRERQR 168
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +2
Query: 2 YIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 160
Y+ ++++K D +R +++ R+ ++R+ + R +PTR DKAR+ GY+AKQG
Sbjct: 6 YVADIWKKPYEDPLRQVIKARLIKWRREPAILRVDKPTRIDKARKYGYKAKQG 58
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +2
Query: 5 IQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 160
+ EL+R+K SDVM F+ RVR W +R R RPTRPDKARRLG +AKQG
Sbjct: 7 VSELWRRKQSDVMTFVQRVRCWDHR---RQPAIGRPTRPDKARRLGDKAKQG 55
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 373 FEVILVDPSHKAISRDPKINWIVNAVHKHREMRGLTSAGRSSRGL 507
FE+ILVD +H AI D +INW+ VHKH E+ GLTSAG RGL
Sbjct: 363 FEIILVDVAHSAIRDDLRINWLCKPVHKHGELHGLTSAGNKYRGL 407
>UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein
isoform 2; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 2 - Pan troglodytes
Length = 110
Score = 46.4 bits (105), Expect = 6e-04
Identities = 26/74 (35%), Positives = 39/74 (52%)
Frame = -1
Query: 483 RSQTTHLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXX 304
R Q THL +L+ DP+ +RI+++ + ++EDNL + I NPVR Q
Sbjct: 37 RCQPTHLPVLVEWFDDPLGVRISSDSFMEWINEDNLRKFLCGIFTNPVRIQDAQSPMVAS 96
Query: 303 XTFLSNGLKVARGL 262
+ L NGLK + L
Sbjct: 97 SSLLCNGLKASSKL 110
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 45.2 bits (102), Expect = 0.001
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = +1
Query: 346 VAQDSSYKYFEVILVDPSHKAISRDPKIN 432
+ +DS+YKY+E+ILVD +H AI DP+IN
Sbjct: 34 INEDSTYKYYEIILVDVAHSAIQNDPRIN 62
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 271 RNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAISRDPKINWIV-NA 447
++ + +AEE +SYWVA D Y+YFEVIL+D + I DP + I
Sbjct: 96 KSWRQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVILIDCNLPTIKNDPLYSGICGRE 155
Query: 448 VHKHREMRGL 477
V + R +R L
Sbjct: 156 VPRRRIIRRL 165
Score = 41.1 bits (92), Expect = 0.023
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2
Query: 2 YIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 160
Y+ YRK +V L+R + ++R+ + R RP R ++AR+LGY+AKQG
Sbjct: 8 YMAMWYRKIGREVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQG 60
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +1
Query: 337 SYWVAQDSSYKYFEVILVDPSHKAISRDPKINWIVNA 447
SY+V +D +Y +FEVIL DPSH +++DP++ V A
Sbjct: 113 SYFVYKDGAYYWFEVILADPSHPRVAKDPELRDRVGA 149
Score = 39.5 bits (88), Expect = 0.070
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 53 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 160
+R RV +R+ + R RPTR D+AR LGY+AKQG
Sbjct: 20 IRDRVIIWRKQNAVTRIERPTRIDRARSLGYKAKQG 55
>UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725w;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein dl4725w - Arabidopsis thaliana (Mouse-ear cress)
Length = 520
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/45 (42%), Positives = 33/45 (73%)
Frame = -1
Query: 477 QTTHLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNP 343
+T+ ++L++ + DPVD I ++G+V RV++DNL +LV R+L P
Sbjct: 464 ETSEFSVLVHRVADPVDPWIISDGIVCRVYKDNLVVLVGRVLRKP 508
>UniRef50_Q7QNU1 Cluster: GLP_157_10563_10210; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_10563_10210 - Giardia lamblia
ATCC 50803
Length = 117
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = -1
Query: 507 ETSGAATSRSQTTHLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQ 331
ET+G AT R +T L L + DP++L I + V R+ E++L LV +L NPV Q
Sbjct: 42 ETAGLATGRGETATLAALHDRVADPINLWIVADPRVERIDENDLVPLVGPVLGNPVGIQ 100
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 40.7 bits (91), Expect = 0.030
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +1
Query: 256 QLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAISRDPKI 429
++K N++++AE SY++ +D + +FEVIL DP H +++D ++
Sbjct: 125 RIKADDNMKTVAERRVSERYPNMKLLGSYFIYKDGKHYWFEVILADPDHPRVAQDKEL 182
Score = 38.3 bits (85), Expect = 0.16
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 53 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 160
LR RV +R+ + R +P+R +ARRLGY+AKQG
Sbjct: 59 LRERVVGWRKQNAVTRIDKPSRIQRARRLGYKAKQG 94
>UniRef50_Q6ZWG3 Cluster: CDNA FLJ41135 fis, clone BRACE2028970;
n=2; Homo sapiens|Rep: CDNA FLJ41135 fis, clone
BRACE2028970 - Homo sapiens (Human)
Length = 142
Score = 35.9 bits (79), Expect = 0.86
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 AVPSVDSYAPRSQAHKAGQSPKTRLPC*TRLHCIQNPCATWWPQA--SSC*GCHLWQA*E 243
A P V+S+ PR+Q H A P+T P T +H + PC W + SSC G L
Sbjct: 42 AHPQVESWVPRAQTHPA--PPQTWAPFFT-MHSSEQPCRQTWRASVLSSCEGLCL----G 94
Query: 244 PWCH 255
PW H
Sbjct: 95 PWRH 98
>UniRef50_Q88XE2 Cluster: Transcription regulator; n=1;
Lactobacillus plantarum|Rep: Transcription regulator -
Lactobacillus plantarum
Length = 129
Score = 33.9 bits (74), Expect = 3.5
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 427 INWIVNAVHKHREMRGLTSAGRSSRGLA-RDIDTLKQREAHAG-QLGSDATLFN 582
IN+I+N +H R+++ LTS S+ GL+ ++ L E H G Q+G A N
Sbjct: 5 INYIMNIMHLERDLKRLTSNWSSATGLSLNELRILVYVEQHPGIQIGDVANALN 58
>UniRef50_A5DWM5 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 465
Score = 33.5 bits (73), Expect = 4.6
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -3
Query: 217 LSNWTLAATTSHTDSEYNVTLFSTVA*SSGFVRPCGPGSAVHTSQLTVLPYPHTQQKTHN 38
LSN+T AAT ++T++ N VA ++ P S VH+ L+ PH T
Sbjct: 69 LSNYTFAATNNNTNNRNNTITAKGVAPANAANAPIAVSSKVHSPALSEHQNPHFTTNTPR 128
Query: 37 I 35
+
Sbjct: 129 V 129
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 32.7 bits (71), Expect = 8.0
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 403 KAISRDPKINWIVNAVHKH-REMRGLTSAGRSSRGLARDIDTLKQREAH 546
+A + DP +V K R RGLTSAGR SRGL + K RE H
Sbjct: 77 RAQAPDPTYPKLVKVKRKRGRAFRGLTSAGRKSRGLV----STKFRETH 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,965,415
Number of Sequences: 1657284
Number of extensions: 12943127
Number of successful extensions: 34548
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 33126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34535
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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