Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00147
         (430 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118487-1|AAM49856.1|  870|Drosophila melanogaster LD01372p pro...    29   2.0  
AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA...    29   2.0  

>AY118487-1|AAM49856.1|  870|Drosophila melanogaster LD01372p
           protein.
          Length = 870

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 182 LSGNSGRKHSRCCTSILRKFSGRQLVSQLTAAA 280
           LSG+S   HSR  T++LRK S +Q  + L A +
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQHTNSLRAVS 220


>AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA
           protein.
          Length = 2139

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 182 LSGNSGRKHSRCCTSILRKFSGRQLVSQLTAAA 280
           LSG+S   HSR  T++LRK S +Q  + L A +
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQHTNSLRAVS 220


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,626,955
Number of Sequences: 53049
Number of extensions: 361632
Number of successful extensions: 602
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)