Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00146X
(585 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 162 5e-39
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 162 6e-39
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 132 8e-30
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 131 1e-29
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 124 2e-27
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 123 3e-27
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 117 2e-25
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 115 9e-25
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 113 4e-24
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 109 5e-23
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 109 5e-23
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 108 8e-23
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 107 2e-22
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 95 1e-18
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 94 3e-18
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 83 4e-15
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 83 6e-15
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 83 6e-15
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 2e-12
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 67 3e-10
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 63 4e-09
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 61 2e-08
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 60 5e-08
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 59 7e-08
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 59 9e-08
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 54 2e-06
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 51 2e-05
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 49 7e-05
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 48 2e-04
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 46 5e-04
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 43 0.006
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 43 0.006
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 36 0.93
UniRef50_Q9DG49 Cluster: Pleomorphic adenoma gene-like 2; n=19; ... 35 1.2
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 35 1.2
UniRef50_Q1QC73 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_P14653 Cluster: Homeobox protein Hox-B1; n=29; Euteleos... 35 1.6
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 34 2.2
UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;... 34 2.8
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 34 2.8
UniRef50_UPI0000E49AD9 Cluster: PREDICTED: hypothetical protein;... 33 3.8
UniRef50_Q7QJT4 Cluster: Protein prickle; n=2; Anopheles gambiae... 33 3.8
UniRef50_A0V1V8 Cluster: Glycosyl transferase, family 51 precurs... 33 5.0
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 33 5.0
UniRef50_Q5AVS1 Cluster: DNA-directed RNA polymerase; n=8; Trich... 33 5.0
UniRef50_O00257 Cluster: E3 SUMO-protein ligase CBX4; n=13; Euth... 33 5.0
UniRef50_A2YVE7 Cluster: Putative uncharacterized protein; n=2; ... 33 6.6
UniRef50_O46169 Cluster: Orthodenticle-1 protein; n=1; Tribolium... 33 6.6
UniRef50_A5WWD4 Cluster: Novel collagen protein; n=5; Danio reri... 32 8.7
UniRef50_Q1HTP5 Cluster: X2R; n=1; Squirrelpox virus|Rep: X2R - ... 32 8.7
UniRef50_Q0S4B0 Cluster: Putative uncharacterized protein; n=2; ... 32 8.7
UniRef50_A1UAY1 Cluster: Putative uncharacterized protein; n=3; ... 32 8.7
UniRef50_A5K9L4 Cluster: Asparagine-tRNA ligase, putative; n=1; ... 32 8.7
UniRef50_A7F9H5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_A6SHQ7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q15911 Cluster: Zinc finger homeobox protein 3; n=25; A... 32 8.7
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 162 bits (394), Expect = 5e-39
Identities = 90/170 (52%), Positives = 111/170 (65%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGR 181
EK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGR
Sbjct: 13 EKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGR 71
Query: 182 AVARIPRVRGGGTHRSGQGAFGNMFVVD-VCSPPRSPGGVGTVASTSDSGERPWRQRCCY 358
AVARIPRVRGGGTHRSGQGAFGNM + +P ++ +T+
Sbjct: 72 AVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAAS 131
Query: 359 RSPSARSX*RTHY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDI 508
P A + H ++ P PLVV DKV+ KTK+AV+ L++LKAW+DI
Sbjct: 132 ALP-ALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
Score = 76.2 bits (179), Expect = 5e-13
Identities = 43/110 (39%), Positives = 54/110 (49%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPELPTGCSR 435
RGGRMFAPTK WRRWH + ++ PELP
Sbjct: 97 RGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVED 156
Query: 436 QSPGDQQDQTGCHLPEAPQGMV*YLKVYKSQRLRAGKGKMRNRRRIQRKG 585
+ G ++ + L + + KVY SQR+RAGKGKMRNRRRIQR+G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRG 206
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 162 bits (393), Expect = 6e-39
Identities = 89/169 (52%), Positives = 104/169 (61%)
Frame = +2
Query: 2 EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGR 181
EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGR
Sbjct: 15 EKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGR 74
Query: 182 AVARIPRVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYR 361
AVARIPRVRGGGTHRSGQGAFGNM P +
Sbjct: 75 AVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAAS 134
Query: 362 SPSARSX*RTHY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDI 508
A + H FPLVV+D+VQ++ KTKQAVIFLRRLK W+DI
Sbjct: 135 GVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADI 183
Score = 58.0 bits (134), Expect = 2e-07
Identities = 37/110 (33%), Positives = 48/110 (43%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPELPTGCSR 435
RGGRMFAPTK +RRWH + ++ E P S
Sbjct: 100 RGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSD 159
Query: 436 QSPGDQQDQTGCHLPEAPQGMV*YLKVYKSQRLRAGKGKMRNRRRIQRKG 585
+ Q+ + + KVYKSQR RAG+G MR+RRRI R+G
Sbjct: 160 EVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 132 bits (318), Expect = 8e-30
Identities = 59/80 (73%), Positives = 65/80 (81%)
Frame = +2
Query: 14 TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVAR 193
T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQTSAESWGTGRAVAR
Sbjct: 15 TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQTSAESWGTGRAVAR 74
Query: 194 IPRVRGGGTHRSGQGAFGNM 253
IPRV GGGTHR+GQ AFGNM
Sbjct: 75 IPRVSGGGTHRAGQAAFGNM 94
Score = 47.2 bits (107), Expect = 3e-04
Identities = 35/113 (30%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPELPTGC-S 432
R GRMFAPTK WR+WH + E+P S
Sbjct: 96 RSGRMFAPTKVWRKWHQKINLGQKRFATVSALAASGVPALLFARGHQISEVAEVPLVINS 155
Query: 433 RQSPGDQQDQT--GCHLPEAPQGMV*YLKVYKSQRLRAGKGKMRNRRRIQRKG 585
G + +T L + + KV S++LRAGKGK+R RR QR+G
Sbjct: 156 EVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHRQRRG 208
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 131 bits (316), Expect = 1e-29
Identities = 62/84 (73%), Positives = 69/84 (82%)
Frame = +2
Query: 2 EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGR 181
+KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWGTGR
Sbjct: 130 DKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWGTGR 188
Query: 182 AVARIPRVRGGGTHRSGQGAFGNM 253
AVARIPRVRGGGTHRSGQGAFGNM
Sbjct: 189 AVARIPRVRGGGTHRSGQGAFGNM 212
Score = 37.1 bits (82), Expect = 0.30
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWH 303
RGGRMFAPTK +RRWH
Sbjct: 214 RGGRMFAPTKVFRRWH 229
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 124 bits (298), Expect = 2e-27
Identities = 71/166 (42%), Positives = 87/166 (52%)
Frame = +2
Query: 35 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 214
PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q SAESWGTGRAVARIPRV G
Sbjct: 24 PLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVARIPRVSGS 83
Query: 215 GTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSARSX*RTH 394
GTHRSGQ AFGN S P R H
Sbjct: 84 GTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHAAATAVAATGIVPLVLARGH 143
Query: 395 Y*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILRCTSLSV 532
P PLVV DK++ KT A+ FL+R A+ D+ + S V
Sbjct: 144 RISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKV 189
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 123 bits (297), Expect = 3e-27
Identities = 72/151 (47%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Frame = +2
Query: 35 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 214
PLP VF +P+R DLV V +MSKN RQ Y VS +AGHQ SAESWGTGRAVARIPRV
Sbjct: 24 PLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAESWGTGRAVARIPRVSAS 83
Query: 215 GTHRSGQGAFGNMF-VVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSARSX*RT 391
GT RSGQGAFGNM + SP ++ +T++ PS R
Sbjct: 84 GTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPSLVMA-RG 142
Query: 392 HY*KDSPSFPLVVADKVQEINKTKQAVIFLR 484
H + P PLV+++++Q INKT AV F +
Sbjct: 143 HRINNVPELPLVISNEIQNINKTSTAVEFFK 173
Score = 42.3 bits (95), Expect = 0.008
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPELPTGCSR 435
RGG MF+P K +RR+H + PELP S
Sbjct: 98 RGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPSLVMARGHRINNVPELPLVISN 157
Query: 436 QSPGDQQDQTGCHL-PEAPQGMV*YLK-VYKSQRLRAGKGKMRNRRRI 573
+ + T +G+ +K + S +R GKGKMRNRRR+
Sbjct: 158 EIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRV 205
Score = 33.1 bits (72), Expect = 5.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 336 LGGSVAATGVPALVXARGHIIEKIP 410
+ ++AATG P+LV ARGH I +P
Sbjct: 125 VAAAIAATGCPSLVMARGHRINNVP 149
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 117 bits (282), Expect = 2e-25
Identities = 72/169 (42%), Positives = 89/169 (52%)
Frame = +2
Query: 8 SETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 187
S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G SA SWGTGRAV
Sbjct: 14 SDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSAHSWGTGRAV 72
Query: 188 ARIPRVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSP 367
ARIPR+ GGGT SG GAFGNM P S
Sbjct: 73 ARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSV 132
Query: 368 SARSX*RTHY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILR 514
+ R H + P PLVV D +Q KTK+A+ FL+ + A D+ R
Sbjct: 133 PSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNR 181
Score = 54.0 bits (124), Expect = 2e-06
Identities = 33/110 (30%), Positives = 47/110 (42%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPELPTGCSR 435
RGGRMFAPTK +RRWH + PE+P
Sbjct: 96 RGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSVPSLVMSRGHQIGNVPEVPLVVED 155
Query: 436 QSPGDQQDQTGCHLPEAPQGMV*YLKVYKSQRLRAGKGKMRNRRRIQRKG 585
G ++ + +A + +V S+ +RAG+GKMRNRR + R+G
Sbjct: 156 SIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRG 205
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 115 bits (276), Expect = 9e-25
Identities = 72/162 (44%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q SA SWGTGRAVARIPR+ G G
Sbjct: 24 LPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSG 83
Query: 218 THRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPS--ARSX*RT 391
+ R+GQGAFGNM P + R + C + + A R
Sbjct: 84 SGRNGQGAFGNMTRKGHMFSPLK--NFRKWQRKTPKQMRRFAVASCIAASAVPALVSARG 141
Query: 392 HY*KDSPSFPLVVADK-VQEINKTKQAVIFLRRLKAWSDILR 514
H+ P PLVV K + I KTKQAV L+++ A+SD+L+
Sbjct: 142 HHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLK 183
Score = 35.5 bits (78), Expect = 0.93
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 1/111 (0%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPELPTGCSR 435
R G MF+P K +R+W + P++P +
Sbjct: 97 RKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHHIAGVPQIPLVVNS 156
Query: 436 QSPGD-QQDQTGCHLPEAPQGMV*YLKVYKSQRLRAGKGKMRNRRRIQRKG 585
+S ++ + +L + LKV S+ +RAG+GKMR R+ +RKG
Sbjct: 157 KSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKIKERKG 207
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 113 bits (271), Expect = 4e-24
Identities = 64/159 (40%), Positives = 85/159 (53%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
+P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTSA SWGTGRA+AR+PRV+GGG
Sbjct: 23 MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKGGG 82
Query: 218 THRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSARSX*RTHY 397
THR+GQ A+ N P + + R H
Sbjct: 83 THRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRGHR 142
Query: 398 *KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILR 514
+ P+VV D +++INKTK AV L + +++ R
Sbjct: 143 IEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKR 181
Score = 33.5 bits (73), Expect = 3.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWH 303
R G M+APT+ WRRWH
Sbjct: 96 RAGGMYAPTRVWRRWH 111
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 109 bits (262), Expect = 5e-23
Identities = 67/159 (42%), Positives = 92/159 (57%), Gaps = 2/159 (1%)
Frame = +2
Query: 38 LPFVFK-APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 214
+P V + +PIRPD+V+ VH++++KN RQP+ AGHQ SAESWGTGRAVAR+PR+ G
Sbjct: 23 VPSVIRYSPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGS 82
Query: 215 GTHRSGQGAFGNMF-VVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSARSX*RT 391
GT R+GQ AF N + SP + + + + +PS R
Sbjct: 83 GTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLA-RG 141
Query: 392 HY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDI 508
H + P PLVV+D V++I KTK+AV L LKA D+
Sbjct: 142 HKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDV 180
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/110 (27%), Positives = 43/110 (39%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPELPTGCSR 435
RGG M++P K WRRWH + + PELP S
Sbjct: 97 RGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLARGHKIDNVPELPLVVSD 156
Query: 436 QSPGDQQDQTGCHLPEAPQGMV*YLKVYKSQRLRAGKGKMRNRRRIQRKG 585
++ + + A + +S+R+R G GK RNRR QR+G
Sbjct: 157 DVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRG 206
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 109 bits (262), Expect = 5e-23
Identities = 62/159 (38%), Positives = 82/159 (51%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
LP VF PIR DLV + +RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGG
Sbjct: 21 LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGG 80
Query: 218 THRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSARSX*RTHY 397
T R+GQGAF N + P ++ + + ++ R H
Sbjct: 81 TRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLVEARGHR 140
Query: 398 *KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILR 514
D P++V+D + + KTK AV LR L ++ R
Sbjct: 141 ISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKR 179
Score = 37.9 bits (84), Expect = 0.17
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 511 KVYKSQRLRAGKGKMRNRRRIQRKG 585
+V KS+ +R GKGKMRNRR QRKG
Sbjct: 179 RVEKSRGVRCGKGKMRNRRYTQRKG 203
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 108 bits (260), Expect = 8e-23
Identities = 49/72 (68%), Positives = 57/72 (79%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
+P VF+ PIR DL+ + +MSKN R PY V AG++TSAESWGTGRAVARIPRV GGG
Sbjct: 24 IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETSAESWGTGRAVARIPRVPGGG 83
Query: 218 THRSGQGAFGNM 253
THR+GQ AFGNM
Sbjct: 84 THRAGQAAFGNM 95
Score = 34.3 bits (75), Expect = 2.2
Identities = 27/104 (25%), Positives = 36/104 (34%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPELPTGCSR 435
RGG MF PTK WRRW + E+P S
Sbjct: 97 RGGGMFNPTKIWRRWGRKINLKEKRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASN 156
Query: 436 QSPGDQQDQTGCHLPEAPQGMV*YLKVYKSQRLRAGKGKMRNRR 567
Q+ + + ++ KS +LRA GKMRNR+
Sbjct: 157 DIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRK 200
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 107 bits (257), Expect = 2e-22
Identities = 63/161 (39%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
+P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+QTSA SWGTGRA++R PRV+GGG
Sbjct: 23 MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWGTGRALSRTPRVKGGG 82
Query: 218 THRSGQGAFGNMF-VVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRS-PSARSX*RT 391
THRSGQ A+ N + +P R+ + + S P S R
Sbjct: 83 THRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSVAATASVPLVMS--RG 140
Query: 392 HY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILR 514
H + P PLV+ D ++ + KT+ AV L + ++ R
Sbjct: 141 HRVESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKR 181
Score = 33.1 bits (72), Expect = 5.0
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWH 303
R G MFAPT+ WR WH
Sbjct: 96 RAGGMFAPTRTWRHWH 111
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 94.7 bits (225), Expect = 1e-18
Identities = 60/156 (38%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G G
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 218 THRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSARS-----X 382
THRSGQGA N C R + R+ + + ++ S
Sbjct: 79 THRSGQGAIANF-----CRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIV 133
Query: 383 *RTHY*KDSPSFPLVVADKVQEINKTKQAVIFLRRL 490
R + K P P V+ D +++I KT+ + L L
Sbjct: 134 SRGYRVKTIPEIPFVIEDSIEKIPKTRDLIKILTTL 169
Score = 36.7 bits (81), Expect = 0.40
Identities = 27/111 (24%), Positives = 42/111 (37%)
Frame = +1
Query: 235 GCLR*HVRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPE 414
G + RGGR+F PT WR+WH +K PE
Sbjct: 85 GAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYRVKTIPE 144
Query: 415 LPTGCSRQSPGDQQDQTGCHLPEAPQGMV*YLKVYKSQRLRAGKGKMRNRR 567
+P + + + G+ ++ ++L++GKGKMRNRR
Sbjct: 145 IPFVIEDSIEKIPKTRDLIKI-LTTLGINSIVRNKLKRKLKSGKGKMRNRR 194
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 93.9 bits (223), Expect = 3e-18
Identities = 59/167 (35%), Positives = 89/167 (53%), Gaps = 2/167 (1%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
LP VF PIR ++V +V+V+++KN++QP+ AG + SA SWGTGRA A +PRV G G
Sbjct: 21 LPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAISWGTGRAKACVPRVNGSG 80
Query: 218 THRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSA--RSX*RT 391
++R+GQGA+ N P P + S +R + + + R
Sbjct: 81 SNRNGQGAYANFCRGGHRFNP--PTLLRRWFRPVPSRQRKFAIASAIAATAVVPLVQARG 138
Query: 392 HY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILRCTSLSV 532
H + P+VV D VQEI +T+ AV L+++ + D+ R SV
Sbjct: 139 HVLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSV 185
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 83.4 bits (197), Expect = 4e-15
Identities = 57/166 (34%), Positives = 76/166 (45%)
Frame = +2
Query: 20 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIP 199
Q A P P VF P+RPD++N VH + K R PY VS+ AG Q +A SWG GRAVAR+P
Sbjct: 14 QVAELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWGPGRAVARLP 73
Query: 200 RVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSARS 379
R G G GA+ N + P + + + +A
Sbjct: 74 RKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAASANAALV 127
Query: 380 X*RTHY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILRC 517
R H D PS PLVV + KTK A+ ++ + D+ RC
Sbjct: 128 EARGHRIADVPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERC 171
Score = 35.5 bits (78), Expect = 0.93
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1
Query: 523 SQRLRAGKGKMRNRRRIQRKG 585
S+ +RAG+GKMRNRR I RKG
Sbjct: 174 SRHIRAGRGKMRNRRYITRKG 194
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 82.6 bits (195), Expect = 6e-15
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +2
Query: 104 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNM 253
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNM
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNM 71
Score = 54.0 bits (124), Expect = 2e-06
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPELPTGCSR 435
R GRMFAPTK WR+WH S + PE+P S
Sbjct: 73 RSGRMFAPTKVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISS 132
Query: 436 QSPGD---QQDQTGCHLPEAPQGMV*YLKVYKSQRLRAGKGKMRNRRRIQRKG 585
+ D ++ L +A K S++LRAGKGK+R RR QR+G
Sbjct: 133 TAFADAAIRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRG 185
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 82.6 bits (195), Expect = 6e-15
Identities = 49/162 (30%), Positives = 73/162 (45%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
LP F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+G
Sbjct: 18 LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVKGRR 77
Query: 218 THRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSARSX*RTHY 397
+G+ A V + +P T R + R H
Sbjct: 78 HPAAGRAARVAQAVGGQKAHAPTPEKDWTQRVNRKERRAALRSALAATAKPEFVKERGHV 137
Query: 398 *KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILRCTS 523
D P P+VV D+++ +NK ++ F + + W+D+ R S
Sbjct: 138 IDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKS 179
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2
Query: 71 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +1
Query: 511 KVYKSQRLRAGKGKMRNRRRIQRKG 585
KVY SQR+RAGKGKMRNRR IQR+G
Sbjct: 123 KVYASQRMRAGKGKMRNRRPIQRRG 147
Score = 33.5 bits (73), Expect = 3.8
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 437 KVQEINKTKQAVIFLRRLKAWSDI 508
KV+ KTK+ V+ L++LKAW+DI
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDI 121
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 66.9 bits (156), Expect = 3e-10
Identities = 45/159 (28%), Positives = 70/159 (44%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+ G
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVKNSG 84
Query: 218 THRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSARSX*RTHY 397
G + PP + A+ + + A R H
Sbjct: 85 EAALAPNTVGGR----LAFPPSVNKKLAEEANVKEK-RLAVISALSATADIAFVRARGHV 139
Query: 398 *KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILR 514
KDS FP+VV D + + T + FL+++ + D+ R
Sbjct: 140 FKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVER 178
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 63.3 bits (147), Expect = 4e-09
Identities = 27/32 (84%), Positives = 32/32 (100%)
Frame = +2
Query: 419 PLVVADKVQEINKTKQAVIFLRRLKAWSDILR 514
PLVV+DK+QEINKTKQAVIFLRR+KAWSD+L+
Sbjct: 16 PLVVSDKIQEINKTKQAVIFLRRIKAWSDVLK 47
Score = 53.6 bits (123), Expect = 3e-06
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 508 LKVYKSQRLRAGKGKMRNRRRIQRKG 585
LKVYKSQRLRAGKGKMRNRRR+ RKG
Sbjct: 46 LKVYKSQRLRAGKGKMRNRRRLHRKG 71
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 61.3 bits (142), Expect = 2e-08
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Frame = +2
Query: 41 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 220
P F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLW 104
Query: 221 HRSGQGAFG-NMFVVDVCSPPRSPGGVGTVASTSDS--GERPWRQRCCYRSPSARSX*RT 391
R G F N PP+ + + + R YRS A R
Sbjct: 105 PR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAA---RG 158
Query: 392 HY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILR 514
H + PS P+VV ++IN+ K+A L W D+ R
Sbjct: 159 HVVEKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVER 199
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 59.7 bits (138), Expect = 5e-08
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
LP +F+ RPD++ +SM QP+ AG +T+AES+G+GR A +PRV+G
Sbjct: 19 LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRGAAMVPRVKGSS 78
Query: 218 THRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTS-DSGERPWRQRCCYRSPSARS--X*R 388
A G PPR V T+ + ER R + + + R
Sbjct: 79 KAAFVPQAIGGR----KAHPPR----VNTIYHEKINKKERTLAIRSAIAATANKELVEQR 130
Query: 389 THY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILR 514
H + P V+ D+++ + TK+ + L DI+R
Sbjct: 131 GHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVR 172
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 59.3 bits (137), Expect = 7e-08
Identities = 45/159 (28%), Positives = 68/159 (42%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
LP VF +R D++ ++S + RQPY S AG + + G ++R+PR+ GG
Sbjct: 20 LPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTRPGLGISRMPRIAGGS 79
Query: 218 THRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSARSX*RTHY 397
A G PR+ + + + + S A R H
Sbjct: 80 RVVGIASAVGG----KSAHSPRTTKNLYVKINDRERKMAKYSAIALTASVEAVKK-RGHR 134
Query: 398 *KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILR 514
K+ P+VV D V+ INKTK A+ L+ L + DI R
Sbjct: 135 FKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIER 173
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 58.8 bits (136), Expect = 9e-08
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +2
Query: 140 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNM 253
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NM
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANM 96
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 54.0 bits (124), Expect = 2e-06
Identities = 44/165 (26%), Positives = 72/165 (43%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 217
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGR 76
Query: 218 THRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSARSX*RTHY 397
R Q G PP++ ++ + R + + R H
Sbjct: 77 ARRVPQAVKGRS-----AHPPKTEKD-RSLDLNDKERQLAVRSALAATADADLVADRGHE 130
Query: 398 *KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILRCTSLSV 532
D P+VV+D +++ KT++ V L L +DI R +
Sbjct: 131 -FDRDEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADETKI 174
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 211
LP +F+ P+R DL+ +S QP AG +TSA S G GR VAR+PR++G
Sbjct: 31 LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG 88
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 49.2 bits (112), Expect = 7e-05
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 3/168 (1%)
Frame = +2
Query: 20 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVAR 193
+G LP VF P R DL+ + + + QP AG SA+S TG AR
Sbjct: 12 KGKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQAR 71
Query: 194 IPRVRGGGTHRSGQ-GAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPS 370
I R++GGG R G+ G ++ PP+ + + + S S
Sbjct: 72 IARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKS 131
Query: 371 ARSX*RTHY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDILR 514
+ R H D P+V++D ++ ++K + L L ++D+ R
Sbjct: 132 TVAG-RGHI-IDGIELPIVISDDIESVSKASEVRKILSALGLFADVNR 177
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +2
Query: 38 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 214
LP VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG 76
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 46.4 bits (105), Expect = 5e-04
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +2
Query: 410 PSFPLVVADKVQEINKTKQAVIFLRRLKAWSDI 508
P PLVV DKV+ KT++AV+ L++LKAW+DI
Sbjct: 11 PELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDI 43
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 42.7 bits (96), Expect = 0.006
Identities = 52/178 (29%), Positives = 74/178 (41%), Gaps = 16/178 (8%)
Frame = +2
Query: 23 GAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPR 202
GA+ +P VF +PIR D+VN VH ++KN + E +S G +P
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKND----STTDEIQLCFLLDSQGKRTPCTDVPA 70
Query: 203 VRGGGTHRSGQGA-FGNMFVVDVCSP--PRSPGGVGTVASTSDSGERPWRQR-------- 349
+ R GA V VC P +P +V + + R W +R
Sbjct: 71 TK----PRPSPGAPVARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRR-WHRRVNIKEKRY 125
Query: 350 --CCYRSPSA---RSX*RTHY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSDI 508
C + SA R H + P PLVV D I KT +AV L++L A++DI
Sbjct: 126 AVCSAIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADI 183
Score = 40.7 bits (91), Expect = 0.025
Identities = 27/111 (24%), Positives = 41/111 (36%)
Frame = +1
Query: 253 VRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPELPTGCS 432
V+G + WRRWH ++ PE+P
Sbjct: 99 VKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIAASAVPSLLLARGHRVEGVPEVPLVVD 158
Query: 433 RQSPGDQQDQTGCHLPEAPQGMV*YLKVYKSQRLRAGKGKMRNRRRIQRKG 585
+ ++ L + KV S+ +R+GKGKMRNRR +QR+G
Sbjct: 159 DSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQRRG 209
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 42.7 bits (96), Expect = 0.006
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +2
Query: 11 ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESW 169
E G A LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 170 GTGRAVARIPRVRGGGT 220
G GR V+RI R G T
Sbjct: 101 GKGRGVSRIMRKAGQRT 117
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 35.5 bits (78), Expect = 0.93
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = +2
Query: 14 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 187
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 188 ARIPRVRGGGTHRSGQGAFG 247
+ GG +GQGA G
Sbjct: 729 SSAAGGAGGAAAAAGQGAAG 748
>UniRef50_Q9DG49 Cluster: Pleomorphic adenoma gene-like 2; n=19;
Euteleostomi|Rep: Pleomorphic adenoma gene-like 2 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 588
Score = 35.1 bits (77), Expect = 1.2
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 281 VGANIRPPRTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 156
+G ++ PP + + HP + +H H H + H Q P +Q+
Sbjct: 347 MGCHMEPPSSLHHHHPHHHHHHHPHHHHQSPPTHQQQPSLQN 388
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 35.1 bits (77), Expect = 1.2
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Frame = +2
Query: 23 GAAKPLPFVFKAPIRPDLVNDVHVS----MSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 190
G + F++K P +PD + HV+ +N+ +P+ + E H +A G A
Sbjct: 427 GEEDNVTFLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAA 486
Query: 191 RIPRVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWR 343
+ + GG S G + + + + VGT T +R R
Sbjct: 487 FMAQHNGGANMESHAGRPADQPLSTLTTTASQQAIVGTFMLTMKGSDRRMR 537
>UniRef50_Q1QC73 Cluster: Putative uncharacterized protein; n=1;
Psychrobacter cryohalolentis K5|Rep: Putative
uncharacterized protein - Psychrobacter cryohalolentis
(strain K5)
Length = 723
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +1
Query: 361 ESQRSFXLEDTLLKRFPELPTGCSRQSPGDQQDQTGCHLPEAPQGMV*YLKVYKSQRL 534
E+Q L D L ++PT ++++ GD+ D+T L + P ++ L+V+ +Q L
Sbjct: 314 EAQNIISLNDILFNDTVDIPTNPAKKNKGDEDDETYYSLIDFPNFLLQVLRVHVTQNL 371
>UniRef50_P14653 Cluster: Homeobox protein Hox-B1; n=29;
Euteleostomi|Rep: Homeobox protein Hox-B1 - Homo sapiens
(Human)
Length = 301
Score = 34.7 bits (76), Expect = 1.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 403 RFPELPTGCSRQSPGDQQDQTGCHLPEAPQGMV 501
R P P GC +++ GD DQ+ C PEA V
Sbjct: 267 RVPPAPPGCPKEAAGDASDQSTCTSPEASPSSV 299
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 34.3 bits (75), Expect = 2.2
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 272 NIRPPRTCYRRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 150
+++ + R PD + +HHHGH G HV+ YP F
Sbjct: 172 SVQAEQAAARGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 539
Score = 33.9 bits (74), Expect = 2.8
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 270 VRPHEALAALAPSRQPPTAESGLGGSVAATGVPALVXARGHIIEKIP 410
+RP + ALAP+ +PP S G A G P L+ A G +++ +P
Sbjct: 151 LRPSSRIRALAPAPRPPLLPSAQG---APHGQPTLICAPGSLLQPLP 194
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.9 bits (74), Expect = 2.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 248 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 138
Y +HP T+ YHH R H Q P I H + P
Sbjct: 75 YHQHPQVTHRYHHQHPQVTYRYHHQQPQITHRYHQHP 111
Score = 33.9 bits (74), Expect = 2.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 248 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 138
Y +HP T+ YHH H + ++ Q+P + H + P
Sbjct: 120 YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
Score = 32.7 bits (71), Expect = 6.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 248 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 135
+++HP T+ YHH H + ++ Q+P + H + Q P
Sbjct: 11 FQQHPQVTHHYHHQ-HPQVTHRYHQHPQVTHRYQYQHP 47
>UniRef50_UPI0000E49AD9 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 808
Score = 33.5 bits (73), Expect = 3.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 272 NIRPPRTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 135
N PP+ HP + +++HH H +QHVQ H PP
Sbjct: 97 NSPPPQQQPYHHPHQQQQHYHHPHHHQHQQHVQQQQQHHPQRQSPP 142
>UniRef50_Q7QJT4 Cluster: Protein prickle; n=2; Anopheles
gambiae|Rep: Protein prickle - Anopheles gambiae
(African malaria mosquito)
Length = 923
Score = 33.5 bits (73), Expect = 3.8
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Frame = +2
Query: 140 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTS 319
+G TS G+ + GGG G G+ G+ F++ P +SP G+ TV +TS
Sbjct: 100 SGAPTSMPGMMPGQQPPGMTLSLGGGGGGGGGGSAGDCFMLPPLQP-QSPDGLSTVTNTS 158
Query: 320 DSGERPWRQRCCY---RSPSARSX*RTHY*KDSPS 415
+ R Y PS S +H+ SP+
Sbjct: 159 STATNAPSARSVYPQHHQPSYPSIGSSHHPFHSPA 193
>UniRef50_A0V1V8 Cluster: Glycosyl transferase, family 51 precursor;
n=1; Clostridium cellulolyticum H10|Rep: Glycosyl
transferase, family 51 precursor - Clostridium
cellulolyticum H10
Length = 861
Score = 33.1 bits (72), Expect = 5.0
Identities = 21/98 (21%), Positives = 39/98 (39%)
Frame = +2
Query: 32 KPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 211
+P+P++ K+P++ + + + + + YC G + T G
Sbjct: 763 RPVPYLPKSPLKGSMSATIKDWIYQLTEDEYCTKHTGGGSNISPPNNTAATSPNTGNTSG 822
Query: 212 GGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDS 325
G+ + G G+ NM P S GG+ ST D+
Sbjct: 823 SGSTKPGDGSLPNM-------PSGSTGGIPPSNSTDDN 853
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 33.1 bits (72), Expect = 5.0
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +1
Query: 511 KVYKSQRLRAGKGKMRNRRRIQRKG 585
K S + GKGKMRNRR I RKG
Sbjct: 45 KAKDSHAIHPGKGKMRNRRYISRKG 69
>UniRef50_Q5AVS1 Cluster: DNA-directed RNA polymerase; n=8;
Trichocomaceae|Rep: DNA-directed RNA polymerase -
Emericella nidulans (Aspergillus nidulans)
Length = 1391
Score = 33.1 bits (72), Expect = 5.0
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = -3
Query: 583 PYAGYDDGCAFYPYQHEDAETCTP*DIRPC-LEAPQEDDSLFGLVDLLDFVGYNQWEA-R 410
P+ GY DG FY +Q+ + ++P ++A E+D L + LD +G W R
Sbjct: 627 PWKGYKDGAYFY-HQNLFVRSTPGESLQPTYVKAALENDGLKMIRKGLDILGGTGWVINR 685
Query: 409 GIFSIMCPLA*TSAGTPVAATLPPRP 332
+F++M L + G P+A P P
Sbjct: 686 DVFNVM--LEAWNTGEPIADLAPLDP 709
>UniRef50_O00257 Cluster: E3 SUMO-protein ligase CBX4; n=13;
Eutheria|Rep: E3 SUMO-protein ligase CBX4 - Homo sapiens
(Human)
Length = 558
Score = 33.1 bits (72), Expect = 5.0
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = -2
Query: 272 NIRPPRTCYRRHPDRTYEYHHHGHAEFG--RQHVQYPMIQHWFGDQPPC 132
N PP HP + +HHH H G HV+ + G++ PC
Sbjct: 374 NTHPPSHHPHPHPHHHHHHHHHHHHAVGLNLSHVRKRCLSETHGEREPC 422
>UniRef50_A2YVE7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 351
Score = 32.7 bits (71), Expect = 6.6
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 200 RVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERP 337
RV+GGG G G G + PPR P G+G+ + T D RP
Sbjct: 117 RVQGGGGGGGGGGRGGYVLRGRSGMPPRGPLGLGSFSRTKDMTWRP 162
>UniRef50_O46169 Cluster: Orthodenticle-1 protein; n=1; Tribolium
castaneum|Rep: Orthodenticle-1 protein - Tribolium
castaneum (Red flour beetle)
Length = 371
Score = 32.7 bits (71), Expect = 6.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 303 PSRQPPTAESGLGGSVAATGVPALVXARGHIIEKIP 410
P P+ SGLGG ++ +PAL GH +E +P
Sbjct: 76 PYAPHPSLSSGLGGGLSGMPMPALGFGLGHPLESVP 111
>UniRef50_A5WWD4 Cluster: Novel collagen protein; n=5; Danio
rerio|Rep: Novel collagen protein - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 1194
Score = 32.3 bits (70), Expect = 8.7
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +2
Query: 161 ESWGTGRAVARIPRVRGGGTHRSG-QGAFGNMFVVDVCSPPRSPG--GV-GTVASTSDSG 328
E G GR ++ R R G G G G V P PG GV G+V + D G
Sbjct: 349 EPGGNGRTGSKGSRGRAGQHGPPGIPGIVGLRGSVGAEGPEGKPGTQGVSGSVGNPGDKG 408
Query: 329 ERPWRQRCCYRSPSARSX*RTH 394
W + C +R+ ARS R H
Sbjct: 409 PHVWPEGCDWRTRKARSF-RAH 429
>UniRef50_Q1HTP5 Cluster: X2R; n=1; Squirrelpox virus|Rep: X2R -
Squirrelpox virus
Length = 736
Score = 32.3 bits (70), Expect = 8.7
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 131 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHR-SGQGAFGNMFVVDVCSPPRSPG-GVGT 304
S ++ H S GT AR GG+ R G G GN + D S R+ G G+G+
Sbjct: 65 STDSSHGQDGRSDGTEEPTARDGDGGTGGSRRNGGSGGLGNSGLGDSDSGRRNQGSGLGS 124
Query: 305 VASTSDSGER 334
+ +SD+ +R
Sbjct: 125 SSGSSDTQQR 134
>UniRef50_Q0S4B0 Cluster: Putative uncharacterized protein; n=2;
Rhodococcus sp. RHA1|Rep: Putative uncharacterized
protein - Rhodococcus sp. (strain RHA1)
Length = 449
Score = 32.3 bits (70), Expect = 8.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 303 PSRQPPTAESGLGGSVAATGVPALVXARGHIIEKIP 410
P+ P + +GG A GVPAL+ G +I +P
Sbjct: 114 PAMSAPDVGTAIGGLAALPGVPALISGLGSLIPSVP 149
>UniRef50_A1UAY1 Cluster: Putative uncharacterized protein; n=3;
Mycobacterium|Rep: Putative uncharacterized protein -
Mycobacterium sp. (strain KMS)
Length = 1488
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 161 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTS 319
++W T RA R+ R G G +G ++ +DV + P + G G V + S
Sbjct: 757 DAWQTSRATRRLATTREEGDRGVAVGVYGWVYGIDVENAPSTAGDGGYVLAPS 809
>UniRef50_A5K9L4 Cluster: Asparagine-tRNA ligase, putative; n=1;
Plasmodium vivax|Rep: Asparagine-tRNA ligase, putative -
Plasmodium vivax
Length = 1047
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 455 KTKQAVIFLRRLKAWSDILRCTSLSVFVLVRVKCATVVVSSVR 583
+ + V + R+K D++RC SV ++ KC VVV+SVR
Sbjct: 281 RNESVVDVVGRVKVHGDLVRCRVPSVESMLNEKCIEVVVASVR 323
>UniRef50_A7F9H5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1513
Score = 32.3 bits (70), Expect = 8.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 330 SPLSEVDATVPTPPGLRGGEHTSTTNML 247
+P E+ A +P PPGL G+H S+ L
Sbjct: 243 TPEGEIKAEIPKPPGLNDGDHVSSITWL 270
>UniRef50_A6SHQ7 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1512
Score = 32.3 bits (70), Expect = 8.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 330 SPLSEVDATVPTPPGLRGGEHTSTTNML 247
+P E+ A +P PPGL G+H S+ L
Sbjct: 243 TPEGEIKAEIPKPPGLNDGDHVSSITWL 270
>UniRef50_Q15911 Cluster: Zinc finger homeobox protein 3; n=25;
Amniota|Rep: Zinc finger homeobox protein 3 - Homo
sapiens (Human)
Length = 3703
Score = 32.3 bits (70), Expect = 8.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 257 VVDVCSPPRSPGGVGTVASTSDSGERPWRQR 349
+ D CSP SPG G+ + DSG+RP ++R
Sbjct: 2920 LADPCSP--SPGASGSAGKSGDSGDRPGQKR 2948
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,869,248
Number of Sequences: 1657284
Number of extensions: 13075755
Number of successful extensions: 45750
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 42369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45479
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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