Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00146X
(585 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 130 1e-30
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 128 3e-30
05_03_0419 - 13707843-13707860,13707936-13708010,13708251-137082... 33 0.17
08_02_0737 - 20572068-20572290,20572785-20572841,20573482-205736... 33 0.22
10_02_0199 + 6668902-6669293,6669825-6669882 31 0.68
03_05_0366 - 23505755-23506441 31 0.68
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497... 30 1.2
05_02_0116 + 6773659-6774437,6775103-6775298,6775381-6775565,677... 30 1.2
06_03_0459 + 21005060-21005419 30 1.6
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 30 1.6
02_04_0457 + 23093020-23093343,23093798-23093806 29 3.6
02_03_0163 + 15859293-15860333 28 4.8
07_03_1636 + 28290642-28291574 28 6.3
01_07_0122 - 41196081-41196205,41197561-41198245,41198961-411993... 28 6.3
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 28 6.3
12_02_0488 + 19587337-19587648,19587739-19587798,19587876-195879... 27 8.3
11_06_0209 + 21282079-21282369,21287029-21287137,21287462-212875... 27 8.3
07_01_0354 + 2578676-2578753,2578871-2578951,2579070-2579312 27 8.3
05_03_0446 + 14111667-14111906,14112011-14112418 27 8.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 27 8.3
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 130 bits (313), Expect = 1e-30
Identities = 76/169 (44%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Frame = +2
Query: 14 TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVAR 193
T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGHQTSAESWGTGRAV+R
Sbjct: 20 TDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSR 79
Query: 194 IPRVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYRSPSA 373
IPRV GGGTHR+GQGAFGNM C R T R+ + +A
Sbjct: 80 IPRVPGGGTHRAGQGAFGNM-----CRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAA 134
Query: 374 RS-----X*RTHY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSD 505
S R H + P PLV++D + I KT QA+ L+++ A++D
Sbjct: 135 TSVPSLVLARGHRIETVPELPLVISDSAESIEKTSQAIKILKQVGAYAD 183
Score = 57.6 bits (133), Expect = 7e-09
Identities = 35/110 (31%), Positives = 44/110 (40%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPELPTGCSR 435
RGGRMFAPTK WR+WH ++ PELP S
Sbjct: 101 RGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIETVPELPLVISD 160
Query: 436 QSPGDQQDQTGCHLPEAPQGMV*YLKVYKSQRLRAGKGKMRNRRRIQRKG 585
+ ++ + + K S +R GKGKMRNRR I RKG
Sbjct: 161 SAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKG 210
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 128 bits (309), Expect = 3e-30
Identities = 72/168 (42%), Positives = 92/168 (54%)
Frame = +2
Query: 2 EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGR 181
E A +P V +APIRPD+V H +S N RQPY VS+ AGHQTSAESWGTGR
Sbjct: 15 EGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGR 74
Query: 182 AVARIPRVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERPWRQRCCYR 361
AV+RIPRV GGGTHR+GQGAFGNM P
Sbjct: 75 AVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAAT 134
Query: 362 SPSARSX*RTHY*KDSPSFPLVVADKVQEINKTKQAVIFLRRLKAWSD 505
+ + R H + P FPLVV+D ++ I KT Q++ L+++ A++D
Sbjct: 135 AVPSLVLARGHRIEGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAYAD 182
Score = 55.6 bits (128), Expect = 3e-08
Identities = 36/110 (32%), Positives = 43/110 (39%)
Frame = +1
Query: 256 RGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXQESQRSFXLEDTLLKRFPELPTGCSR 435
RGGRMFAPTK WRRWH ++ PE P S
Sbjct: 100 RGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHRIEGVPEFPLVVSD 159
Query: 436 QSPGDQQDQTGCHLPEAPQGMV*YLKVYKSQRLRAGKGKMRNRRRIQRKG 585
++ + + K S +RAGKGKMRNRR I RKG
Sbjct: 160 SIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKG 209
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 336 LGGSVAATGVPALVXARGHIIEKIP 410
+ ++AAT VP+LV ARGH IE +P
Sbjct: 127 VASALAATAVPSLVLARGHRIEGVP 151
>05_03_0419 -
13707843-13707860,13707936-13708010,13708251-13708286,
13709718-13709765,13710246-13710326,13710503-13710554,
13710671-13710730,13711266-13711346,13711461-13711577,
13711714-13711754,13711981-13712059,13712136-13712292,
13712586-13712718,13712799-13712926,13715152-13715314
Length = 422
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = -3
Query: 160 STGLVTSLLAHAVGLPRVLGHRNVNIIDQVRTD-GRLEHEREGLGCTLHRLTLL 2
+TG+ +L+ + VG+P+VL ++ I Q+ D G +E +RE G L+ LT L
Sbjct: 204 ATGVYKTLVRYLVGVPQVL----LDFIRQINDDNGPMEEQRERYGPALYTLTKL 253
>08_02_0737 -
20572068-20572290,20572785-20572841,20573482-20573672,
20574566-20574700,20575722-20575871
Length = 251
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 200 RVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGERP 337
RV+GGG G G G + PPR P G+G+ + T D RP
Sbjct: 17 RVQGGGGGGGGGGRGGYVLRGRSGMPPRGPLGLGSFSRTKDMTWRP 62
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 158 AESWGTGRAVARIPRVRGGGTHRSGQGAFGN 250
A+SW TGRA A + R R GG R A N
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAAN 66
>03_05_0366 - 23505755-23506441
Length = 228
Score = 31.1 bits (67), Expect = 0.68
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 44 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 220
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 221 HRSGQGA 241
+ + + A
Sbjct: 168 NDNDEEA 174
>07_03_0493 +
18747427-18748356,18748594-18748697,18749586-18749795,
18749992-18750597,18750819-18751095,18751163-18751310,
18751957-18752044,18752167-18752284
Length = 826
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 287 GFVGANIRPPRTCYRRHPDRTYEYHHHGH 201
GF + PP++ R PD + +HHH H
Sbjct: 30 GFFNILVPPPQSPRPRCPDHQHHHHHHHH 58
>05_02_0116 +
6773659-6774437,6775103-6775298,6775381-6775565,
6775746-6776079,6776174-6776378,6776692-6776834,
6777081-6777233
Length = 664
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +2
Query: 155 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDS 325
++ S +G A R R GG H G+G FG + CS GG G AST+ S
Sbjct: 50 TSSSGSSGSAPPRPARRGGGDYHGVGEG-FGPLIYTS-CSSSAGGGGGGVGASTATS 104
>06_03_0459 + 21005060-21005419
Length = 119
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2
Query: 200 RVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSG 328
R RGGG R +GA+ V PPRS GG T + G
Sbjct: 38 RCRGGGYRREAEGAWA---VASPLPPPRSSGGGAQRTVTVEGG 77
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -2
Query: 236 PDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 135
P + +HHHGH + Q H G PP
Sbjct: 33 PQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPPPP 66
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -2
Query: 233 DRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 135
D +HHH H G H Q QH PP
Sbjct: 32 DPQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPP 64
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +2
Query: 143 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 247
G + S W G A A VRGGG RSG G G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
>02_03_0163 + 15859293-15860333
Length = 346
Score = 28.3 bits (60), Expect = 4.8
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Frame = +2
Query: 26 AAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ---TSAESWGTGRAVARI 196
A +PLPFVF A + LV+ + ++ +P + A + +SA G A+ R+
Sbjct: 85 ALRPLPFVFTAALPVKLVDAAAAAAGASASRPPPAAPAATFKFVVSSAIKVGAMAAIVRV 144
Query: 197 PRVRGGGTHRSGQGAFGNMFV---VDVCSPPRSPGGVGTVASTSDSGERPW 340
+ HR + +F+ +DV P GV +RP+
Sbjct: 145 LHAK-EEMHRYAAFSLNAVFMYCFLDVVLPALGAAGVALGMEMEPQFDRPY 194
>07_03_1636 + 28290642-28291574
Length = 310
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 318 PTAESGLGGSVAATGVPALVXARGHIIEKIPRASHW 425
P S GG VAA PA+ A H+ P + W
Sbjct: 209 PATPSRAGGHVAALAPPAVAKADRHVSTPSPAKADW 244
>01_07_0122 -
41196081-41196205,41197561-41198245,41198961-41199329,
41199405-41199514,41200539-41200833
Length = 527
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
Frame = -2
Query: 278 GANIRPPRTCYRRHPDRTYEYHHHGHAEF-----GRQHVQYPMIQHWFGDQPP 135
G + P H + +HHHGH + + V YP+ + +G PP
Sbjct: 338 GGSEAPSPAPMHHHGHHHHHHHHHGHEDSRHSAPAQAPVHYPVHEPRYGAPPP 390
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 227 TYEYHH-HGHAEFGRQHVQYPMIQH 156
T+++HH HGH FGR H +P H
Sbjct: 144 THDHHHGHGHHLFGRDH--WPASHH 166
>12_02_0488 +
19587337-19587648,19587739-19587798,19587876-19587941,
19588017-19588082,19588253-19588345
Length = 198
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 53 KAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 166
K ++ D N++ + SK R VSK H SAES
Sbjct: 80 KRKVQMDTENELMTNRSKEVRTKMSVSKACKHSVSAES 117
>11_06_0209 +
21282079-21282369,21287029-21287137,21287462-21287580,
21287722-21287829,21287943-21288062,21288838-21289011,
21289111-21289212
Length = 340
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 47 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRA---VARIPRVRGGG 217
VF PIR D+V+ V +K + ++ +Q GTGRA R P+ RGG
Sbjct: 160 VFDVPIRKDIVHRVGTHSTKTISEVSGTGRKPYNQK-----GTGRARHGTLRGPQFRGGA 214
Query: 218 T 220
T
Sbjct: 215 T 215
>07_01_0354 + 2578676-2578753,2578871-2578951,2579070-2579312
Length = 133
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 199 RNSGDSTSSTP*FSTG--LVTSLLAHAVGLPRVLGHRNVNIIDQV 71
R+SG T F+ L + H +G+ VLG +N+ ++DQ+
Sbjct: 87 RDSGLQTGDPAGFTLADTLACGAVGHIMGVGVVLGLKNIGVLDQI 131
>05_03_0446 + 14111667-14111906,14112011-14112418
Length = 215
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 270 VRPHEALAALAPSRQPPTAESGLGGSVAATG 362
+RP ++LA L+P+R +A +G G + A +G
Sbjct: 114 LRPTKSLAHLSPARASSSAAAGGGSATAPSG 144
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 276 PHEALAALAPSRQPPTAESGLGGSVAATGVPA 371
P A +AP PP G+GG G PA
Sbjct: 1175 PPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPA 1206
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,054,566
Number of Sequences: 37544
Number of extensions: 414614
Number of successful extensions: 1575
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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