Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00146X
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   5.5  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   5.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   5.5  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   7.3  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    23   9.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.6  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 245 RRHPDRTYEYHHHGH 201
           ++HP  +  +HHH H
Sbjct: 175 QQHPGHSQHHHHHHH 189


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
 Frame = -2

Query: 281 VGANIRPPRTCYRRHPDRTYEYHHHGH----AEFGRQHVQYPMIQ 159
           +G+ +      +  H    + +HHH H    A+    H Q+ +IQ
Sbjct: 485 MGSTVNGASLTHSHHAHPHHHHHHHHHHPTAADLAGYHHQHNVIQ 529


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 13/46 (28%), Positives = 18/46 (39%)
 Frame = +2

Query: 197 PRVRGGGTHRSGQGAFGNMFVVDVCSPPRSPGGVGTVASTSDSGER 334
           P ++G    +   G  G         PP +PG VG    T   GE+
Sbjct: 20  PGIQGIRGDKGEMGEQGRTGAQGNAGPPGAPGPVGPRGLTGHRGEK 65


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 13  DGAGCSQAPPVRVQGAHPSGPG 78
           DG     +PP+ V G+  S PG
Sbjct: 153 DGLHSIPSPPITVSGSDMSSPG 174


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 19  AGCSQAPPVRVQGAHPSGPGQ*CSRFY 99
           +G +  PP+   G  P+GP      FY
Sbjct: 317 SGITGVPPIPADGPSPAGPYTNVPGFY 343


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 37  PPVRVQGAHPSGPGQ 81
           PP+ +QG  P GP Q
Sbjct: 300 PPMPMQGGAPGGPPQ 314


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,392
Number of Sequences: 2352
Number of extensions: 13449
Number of successful extensions: 55
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)