Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00144
         (801 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   3.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   6.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   6.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.7  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 523 GNLGISGEPGRPGVPGIDGAPGQPG 597
           G+  I  +P + G+     APG+PG
Sbjct: 259 GHHFILSDPSKHGLNDATAAPGEPG 283


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 466 LGTHWRKRKSWS 501
           LG HW  R SW+
Sbjct: 148 LGEHWLSRYSWA 159


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 466 LGTHWRKRKSWS 501
           LG HW  R SW+
Sbjct: 148 LGEHWLSRYSWA 159


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 203 WRAFKSLISFRSLRTDRTWTS 141
           WR F  L ++ ++    TWTS
Sbjct: 180 WRRFTILNNYLTIVLGETWTS 200


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 203 WRAFKSLISFRSLRTDRTWTS 141
           WR F  L ++ ++    TWTS
Sbjct: 176 WRRFTILNNYLTIVLGETWTS 196


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 454 PTHPHFSFLARIPRYSLTRYSWFTSVAFL 368
           P   HFSF++R     L  YS+F  ++++
Sbjct: 68  PISAHFSFMSRF--LCLPFYSYFFYLSYI 94


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 454 PTHPHFSFLARIPRYSLTRYSWFTSVAFL 368
           P   HFSF++R     L  YS+F  ++++
Sbjct: 24  PISAHFSFMSRF--LCLPFYSYFFYLSYI 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,781
Number of Sequences: 336
Number of extensions: 3019
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)