Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00144
(801 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 26 0.47
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 24 1.9
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 3.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 3.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 3.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 3.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 3.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 3.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 3.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 3.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 4.4
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 5.8
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 7.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 7.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 7.6
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.8 bits (54), Expect = 0.47
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 623 PVIPGKPTSPGWPGAPSIPGTPGRPGSPEMPKL 525
P IP G P P++PG+ P P MP +
Sbjct: 418 PPIPNMSNMSGMPPLPNMPGS--MPTMPTMPSM 448
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -2
Query: 482 LQWVPRVHQTHASPFLLFGQDTQVFLDQVF 393
L W+PR H H ++ G + + D F
Sbjct: 40 LNWLPRTHYDHLKEIVIGGFEIEKSEDDSF 69
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 492 FPFSPMGPESPSNPRIP 442
FP PMGP P +IP
Sbjct: 132 FPSRPMGPWVPMQEQIP 148
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 492 FPFSPMGPESPSNPRIP 442
FP PMGP P +IP
Sbjct: 132 FPSRPMGPWVPMQEQIP 148
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 492 FPFSPMGPESPSNPRIP 442
FP PMGP P +IP
Sbjct: 132 FPSRPMGPWVPMQEQIP 148
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 492 FPFSPMGPESPSNPRIP 442
FP PMGP P +IP
Sbjct: 132 FPSRPMGPWVPMQEQIP 148
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 492 FPFSPMGPESPSNPRIP 442
FP PMGP P +IP
Sbjct: 132 FPSRPMGPWVPMQEQIP 148
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 492 FPFSPMGPESPSNPRIP 442
FP PMGP P +IP
Sbjct: 132 FPSRPMGPWVPMQEQIP 148
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 492 FPFSPMGPESPSNPRIP 442
FP PMGP P +IP
Sbjct: 132 FPSRPMGPWVPMQEQIP 148
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 492 FPFSPMGPESPSNPRIP 442
FP PMGP P +IP
Sbjct: 135 FPSRPMGPWVPMQEQIP 151
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 4.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 602 TSPGWPGAPSIPGTPGRPGS 543
TSP +PG S +P P S
Sbjct: 79 TSPSYPGGGSSSPSPSSPSS 98
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 759 SRVSFRTSIPYWSYWTFCPRLTTIA 685
+ V+ T PY SY+++ LT +A
Sbjct: 627 TNVTLSTKCPYPSYYSYIGVLTLVA 651
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/17 (64%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
Frame = +1
Query: 547 PGRPGVPGIDG--APGQ 591
PG PGVPG G AP Q
Sbjct: 332 PGPPGVPGDHGDHAPKQ 348
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/17 (64%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
Frame = +1
Query: 547 PGRPGVPGIDG--APGQ 591
PG PGVPG G AP Q
Sbjct: 332 PGPPGVPGDHGDHAPKQ 348
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/17 (64%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
Frame = +1
Query: 547 PGRPGVPGIDG--APGQ 591
PG PGVPG G AP Q
Sbjct: 271 PGPPGVPGDHGDHAPKQ 287
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,363
Number of Sequences: 438
Number of extensions: 3602
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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