Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00141
(381 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 34 0.034
SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0) 34 0.045
SB_38090| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.059
SB_40116| Best HMM Match : EGF (HMM E-Value=0) 32 0.14
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 31 0.32
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.32
SB_10244| Best HMM Match : Laminin_EGF (HMM E-Value=0) 31 0.42
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.55
SB_58599| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.55
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.73
SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05) 30 0.73
SB_26932| Best HMM Match : rve (HMM E-Value=3.2) 29 0.97
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.97
SB_8046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.97
SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0) 29 0.97
SB_51924| Best HMM Match : PALP (HMM E-Value=3.1e-05) 29 1.3
SB_13550| Best HMM Match : rve (HMM E-Value=3.4e-08) 29 1.3
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 1.3
SB_54615| Best HMM Match : rve (HMM E-Value=4.4e-25) 29 1.3
SB_36580| Best HMM Match : Borrelia_orfA (HMM E-Value=1.6) 29 1.3
SB_31807| Best HMM Match : rve (HMM E-Value=4.4e-25) 29 1.3
SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23) 28 2.2
SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 2.2
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_49127| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 27 3.9
SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_52925| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 6.8
SB_44390| Best HMM Match : NHL (HMM E-Value=1.9e-16) 27 6.8
SB_38273| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_22206| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-38) 27 6.8
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 27 6.8
SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) 27 6.8
SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 26 9.0
SB_40035| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_50113| Best HMM Match : NHL (HMM E-Value=2.3e-07) 26 9.0
SB_39250| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 26 9.0
SB_29891| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_20407| Best HMM Match : ResIII (HMM E-Value=0.36) 26 9.0
SB_11766| Best HMM Match : Reprolysin (HMM E-Value=1.6e-08) 26 9.0
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 34.3 bits (75), Expect = 0.034
Identities = 18/65 (27%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Frame = +1
Query: 16 CKCDENGKCD--KPECLCIP-TEGKLCICLCSDDKGNIKVCDDCLCIPTQSKELNCDKSG 186
C+C NG+CD C C P G C C + C C T + +
Sbjct: 419 CQCSRNGECDAASGRCACAPGFTGDRCESRCPKGYYGTNCSNACTCKATNTNVCDVTSGF 478
Query: 187 CICVP 201
C C P
Sbjct: 479 CHCNP 483
Score = 31.1 bits (67), Expect = 0.32
Identities = 17/61 (27%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = +1
Query: 16 CKCDENGKCDK--PECLCIP-TEGKLCICLCSDDKGNIKVCDDCLCIPTQSKELNCDKSG 186
C C E G CD +C C+P G CI C + C C+ S +
Sbjct: 183 CTCSEYGSCDSRTGKCHCMPGYSGPTCIDECPTGYYGYECTQKCQCVNGASCDRRTGSCN 242
Query: 187 C 189
C
Sbjct: 243 C 243
Score = 29.5 bits (63), Expect = 0.97
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = +1
Query: 16 CKCDENGKCDKP--ECLCIP-TEGKLCICLCSDDK--GN-IKVCD 132
C C+ KCD+ C C P EG C C + + GN K+CD
Sbjct: 912 CLCENGAKCDRKTGACTCAPGFEGLRCSRPCLEGRYGGNCTKICD 956
>SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 546
Score = 33.9 bits (74), Expect = 0.045
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Frame = +1
Query: 16 CKCDENGK----CDKP--ECLC-IPTEGKLCICLCSDDKGNIKVCDDCLCIPTQSKELNC 174
C C+ G CD+ C C GK C LC N C C C P +K+ C
Sbjct: 2 CNCNPEGATNLVCDQSTGRCPCRTRIRGKKCD-LCPLGHFNFPRCKGCDCDPLTTKDEIC 60
Query: 175 DKSG-CIC 195
D +G C+C
Sbjct: 61 DNTGSCVC 68
>SB_38090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 33.5 bits (73), Expect = 0.059
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +1
Query: 16 CKCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVCDDCLCIPTQSKELNCDKSGCIC 195
C C +N + + P C C+ E +C C ++ N VC C C+ + N D + C
Sbjct: 178 CCCMKN-EDNAPVCCCMKNEDNAAVCCCMKNEDNAPVC--C-CMKNEDNAPNEDNAPVYC 233
Score = 30.7 bits (66), Expect = 0.42
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 16 CKCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVC 129
C C +N + + P C C+ E +C C ++ N VC
Sbjct: 130 CCCMKN-EDNAPICCCMKNEDNAAVCCCMKNEDNAPVC 166
Score = 30.3 bits (65), Expect = 0.55
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 16 CKCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVC 129
C C +N + + P C C+ E IC C ++ N VC
Sbjct: 118 CCCMKN-EDNAPVCCCMKNEDNAPICCCMKNEDNAAVC 154
Score = 30.3 bits (65), Expect = 0.55
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 16 CKCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVC 129
C C +N + + P C C+ E +C C ++ N VC
Sbjct: 154 CCCMKN-EDNAPVCFCMKNEDNAPVCCCMKNEDNAPVC 190
Score = 29.5 bits (63), Expect = 0.97
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +1
Query: 22 CDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVC 129
C + + P C C+ E +C C ++ N VC
Sbjct: 11 CCMKNEDNAPVCCCMKNEDNAAVCCCMKNEDNAPVC 46
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 16 CKCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKV 126
C C +N + + P C CI E + IC C ++ N +
Sbjct: 70 CCCMKN-EDNAPVCCCIKNEDNVPICCCMKNEDNAPI 105
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 16 CKCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVC 129
C C +N + + P C+ E +C C ++ N VC
Sbjct: 46 CCCMKN-EDNAPIFCCMKNEDNAAVCCCMKNEDNAPVC 82
Score = 26.2 bits (55), Expect = 9.0
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = +1
Query: 55 CLCIPTEGKLCICLCSDDKGNIKVC 129
C C+ E +C C ++ N+ +C
Sbjct: 70 CCCMKNEDNAPVCCCIKNEDNVPIC 94
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 16 CKCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVC 129
C C +N + + P C+ E +C C ++ N VC
Sbjct: 94 CCCMKN-EDNAPIFCCMKNEDNAAVCCCMKNEDNAPVC 130
>SB_40116| Best HMM Match : EGF (HMM E-Value=0)
Length = 340
Score = 32.3 bits (70), Expect = 0.14
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Frame = +1
Query: 10 DDCK---CDENGKC----DKPECLCIP-TEGKLCICLCSDDKGNIKVCDDCLCIPTQSKE 165
DDC C G C D CLC+P T GK+C N+ CD C+ +
Sbjct: 3 DDCHPNPCQYGGTCVDGLDDFTCLCVPGTTGKICHI-------NVNYCDSEPCMNNATCV 55
Query: 166 LNCDKSGCICVP 201
D CIC P
Sbjct: 56 DEQDGFTCICAP 67
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 31.1 bits (67), Expect = 0.32
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 16 CKCDENGKCDKPECLCIPTEGKLCI-CLCSDDKGNIKVCDDCLC 144
CKC +N CDK + C G I C CS K K C C
Sbjct: 232 CKCQKNATCDKIDGTCQCKPGWTGIDCECSPGKYGNKCEKTCSC 275
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 31.1 bits (67), Expect = 0.32
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 10/73 (13%)
Frame = +1
Query: 7 CDDCKCDENG------KCDKP--ECLCIPTE-GKLCICLCSDDKGNIKVCDDCLCIPTQS 159
C DCKCD G C+ +C C P+ G+ C C+ C C C
Sbjct: 724 CQDCKCDRFGVAGGNIACNPKTGQCPCKPSHTGRRC-DQCAVGYHGYPYCQQCDCDARGV 782
Query: 160 KELNCDKSG-CIC 195
CD +G C+C
Sbjct: 783 NGSVCDSTGRCLC 795
>SB_10244| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 205
Score = 30.7 bits (66), Expect = 0.42
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 9/72 (12%)
Frame = +1
Query: 7 CDDCKCDENGK----CDKP--ECLC-IPTEGKLCI-CLCSDDKGNIKVCDDCLCIPTQSK 162
C C C+ NG CD +C C G+ C C S C +C C S
Sbjct: 108 CRPCDCNVNGSSSSLCDHVTGQCSCKANVVGRDCSRCKVSSYGFGPAGCTECACNVHGSA 167
Query: 163 ELNCDKSG-CIC 195
L CD SG C C
Sbjct: 168 SLQCDDSGVCPC 179
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 30.3 bits (65), Expect = 0.55
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +1
Query: 10 DDCK----CDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVCDDCLCIPTQS 159
+DCK C++N +CD + +C TEG C C G D C P S
Sbjct: 870 EDCKDINECEQNHECDPLKAVCTNTEGSYS-CTCRPGYGG----DGRTCTPISS 918
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 7 CDDCKCDENGKCDKPECLCIPTEGKLCICLCSDD-KGNIKVCDD 135
C+ KCD N K C+ G+ C C+D GN C D
Sbjct: 1243 CEGVKCDPNAK-----CIAASPSGENRTCACNDGFSGNGLFCRD 1281
>SB_58599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 616
Score = 30.3 bits (65), Expect = 0.55
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Frame = +1
Query: 49 PECLCIPT--EGKLCI-CLCSDDKGNIKVCDDCLCIPTQSKELNCDKSGC---ICVPT 204
P C+PT E C+ LC +C+ C+PT K C + C CVPT
Sbjct: 325 PHTACLPTLCEHTACLPTLCEHTVCVPTLCEHTACVPTLCKHTICVPTLCEHTACVPT 382
Score = 27.9 bits (59), Expect = 2.9
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Frame = +1
Query: 58 LCIPT--EGKLCI-CLCSDDKGNIKVCDDCLCIPTQSKELNCDKSGC---ICVPT 204
+C+PT E C+ LC +C+ C+PT K C + C C+PT
Sbjct: 348 VCVPTLCEHTACVPTLCKHTICVPTLCEHTACVPTLCKHTICVPTLCEHTACLPT 402
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 29.9 bits (64), Expect = 0.73
Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
Frame = +1
Query: 10 DDCK-CDENGKCDKPECLC 63
DDC C N KC K EC+C
Sbjct: 645 DDCNGCHHNAKCVKKECIC 663
>SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05)
Length = 117
Score = 29.9 bits (64), Expect = 0.73
Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
Frame = +1
Query: 10 DDCK-CDENGKCDKPECLC 63
DDC C N KC K EC+C
Sbjct: 5 DDCNGCHHNAKCVKKECIC 23
>SB_26932| Best HMM Match : rve (HMM E-Value=3.2)
Length = 241
Score = 29.5 bits (63), Expect = 0.97
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 112 LCHRYTGKYKVFLQSVYTDIPVYHICHFHHICSRHSE 2
+CHR K +L Y+++P I F IC H E
Sbjct: 76 ICHRGKNKTAKYLSENYSNLPKQIITLFTSICKLHQE 112
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 29.5 bits (63), Expect = 0.97
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 13 DCKCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVCDDC--LCIPTQSKELNCDKSG 186
DCK +CD C T+G+ C D+ + +C + +S EL+C G
Sbjct: 303 DCKM----RCDAKVCTSKCTDGRCQAISCGGDRCTQECGKNCTSMACTAKSCELSCPGGG 358
Query: 187 CI 192
CI
Sbjct: 359 CI 360
>SB_8046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 29.5 bits (63), Expect = 0.97
Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 9/72 (12%)
Frame = +1
Query: 7 CDDCKCDENGK----C--DKPECLCIPTEGKLCICLCSDDKGNIKV---CDDCLCIPTQS 159
C C C+ G C D +C C P+ + C D N C C C S
Sbjct: 743 CKACACNMTGSKRSSCHPDTGKCECHPSITERQCSRCLDHYFNFTSGVGCQPCGCNELYS 802
Query: 160 KELNCDKSGCIC 195
++L CD +C
Sbjct: 803 RDLQCDNDTGVC 814
>SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 683
Score = 29.5 bits (63), Expect = 0.97
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 9/73 (12%)
Frame = +1
Query: 4 RCDDCKCDENGK----CDKP--ECLCIPTE-GKLCI-CLCSDDKGNIKVCDDCLCIPTQS 159
+C C C+ NG CD +C C G+ C C + C +C C S
Sbjct: 149 QCKACDCNVNGSSSSLCDHVTGQCSCKENVVGRDCSRCKVNSYGFGPAGCTECACNVHGS 208
Query: 160 KELNCDKSG-CIC 195
L CD SG C C
Sbjct: 209 ASLQCDDSGVCPC 221
>SB_51924| Best HMM Match : PALP (HMM E-Value=3.1e-05)
Length = 407
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 112 LCHRYTGKYKVFLQSVYTDIPVYHICHFHHICSRHSE 2
+CHR K +L Y+++P I F IC H E
Sbjct: 281 ICHRGRDKTAKYLSENYSNLPKQIITLFTSICKLHQE 317
>SB_13550| Best HMM Match : rve (HMM E-Value=3.4e-08)
Length = 241
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 112 LCHRYTGKYKVFLQSVYTDIPVYHICHFHHICSRHSE 2
+CHR K +L Y+++P I F IC H E
Sbjct: 57 ICHRGRDKTAKYLSENYSNLPKQIITLFTSICKLHQE 93
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 29.1 bits (62), Expect = 1.3
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Frame = +1
Query: 7 CDDCKCDENGKCD----KPECLCIPTE--GKLCICLCSDDKGNIKVCDDCLCIPTQSKEL 168
C +C NG+CD P CLC E L +C DK + + C I L
Sbjct: 1122 CSTVQCPNNGRCDASSGSPVCLCPRLEDCSDLNTPVCGSDK--VSYRNKCYMI-----AL 1174
Query: 169 NCDKSGCICVPTE 207
NC K+ + V E
Sbjct: 1175 NCPKNKYVYVKHE 1187
>SB_54615| Best HMM Match : rve (HMM E-Value=4.4e-25)
Length = 460
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 112 LCHRYTGKYKVFLQSVYTDIPVYHICHFHHICSRHSE 2
+CHR K +L Y+++P I F IC H E
Sbjct: 105 ICHRGRDKTAKYLSGNYSNLPKQIITLFTSICKLHQE 141
>SB_36580| Best HMM Match : Borrelia_orfA (HMM E-Value=1.6)
Length = 364
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 112 LCHRYTGKYKVFLQSVYTDIPVYHICHFHHICSRHSE 2
+CHR K +L Y+++P I F IC H E
Sbjct: 105 ICHRGRDKTAKYLSENYSNLPKQIITLFTSICKLHQE 141
>SB_31807| Best HMM Match : rve (HMM E-Value=4.4e-25)
Length = 460
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 112 LCHRYTGKYKVFLQSVYTDIPVYHICHFHHICSRHSE 2
+CHR K +L Y+++P I F IC H E
Sbjct: 105 ICHRGRDKTAKYLSGNYSNLPKQIITLFTSICKLHQE 141
>SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23)
Length = 198
Score = 28.3 bits (60), Expect = 2.2
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 9/66 (13%)
Frame = +1
Query: 7 CDDCKCDENGK----CDKP--ECLCIPTEGKLCICLCSDDKGNI---KVCDDCLCIPTQS 159
C C C + G C+ +C C P L C D N K C C C P S
Sbjct: 127 CQACNCTDRGSKHGVCNNVTGQCDCHPLVTGLSCERCVKDAFNYTSGKGCTACGCHPQGS 186
Query: 160 KELNCD 177
+ CD
Sbjct: 187 NDTQCD 192
>SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 587
Score = 28.3 bits (60), Expect = 2.2
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 8/68 (11%)
Frame = +1
Query: 16 CKCDENG----KCDK--PECLCIPTE-GKLCICLCSDDKGNIKVCDDCLCIPTQSKELNC 174
C+CD G C K +C C G+ C C C C C P S +C
Sbjct: 341 CECDPKGALDASCSKFGGQCTCRRNVVGRKCD-RCMASYTGFPNCRKCECSPVGSVSPDC 399
Query: 175 DKSG-CIC 195
D +G C C
Sbjct: 400 DVTGHCTC 407
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 27.9 bits (59), Expect = 2.9
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 55 CLCIPTEGKLCI---CLCSDD-KGNIKVCDDCLCIPTQSKELNCDKSGCICVPTEEKSYS 222
CL G CI C+C+ GN C++ LC P C+ CIC K Y+
Sbjct: 274 CLYPCMNGGSCINGKCVCAVGFTGN--TCEERLCDPPCQNSGTCNNGTCICT----KQYT 327
Query: 223 *LSSDH 240
S +H
Sbjct: 328 GKSCEH 333
>SB_49127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 112 LCHRYTGKYKVFLQSVYTDIPVYHICHFHHICSRHSE 2
+CHR K +L Y ++P I F +C H E
Sbjct: 105 ICHRGRDKTAKYLSENYNNLPKQIITLFTSLCKLHQE 141
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 5/25 (20%)
Frame = +1
Query: 22 CDENG-----KCDKPECLCIPTEGK 81
CD NG +C+KP C C+ GK
Sbjct: 2078 CDSNGGFKPLQCEKPYCWCVDRNGK 2102
>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1574
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +1
Query: 7 CDDCKCDENGKCDKPECLC--IPTEGKLC-ICLCSDDKGNIKVCDDC 138
C C CD G + EC P G + C+C + G ++ CD C
Sbjct: 1406 CIACNCDPTGGVNGGECEAKNDPAAGLVAGRCICKRNVGGVR-CDRC 1451
>SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 19 KCDENGKCDKPECLCIPT-EGKLC 87
KC ENG C C C+P GK C
Sbjct: 110 KC-ENGVCQDDHCACLPCWRGKSC 132
>SB_52925| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 393
Score = 26.6 bits (56), Expect = 6.8
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = +1
Query: 19 KCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVCDDCLCIPTQSKEL 168
KCDE GK C C P K + S K + CD+C TQSK L
Sbjct: 257 KCDECGK-----CFCRPDNLKEHLITHSGQKPH--KCDECGKCFTQSKSL 299
>SB_44390| Best HMM Match : NHL (HMM E-Value=1.9e-16)
Length = 475
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 97 CSDDKGNIKVCDDCLCIPTQSKELNCDKSGCICVPTEEKS 216
C D+ GNI VCDD ++ + + +++ I V +E+S
Sbjct: 269 CLDNNGNIVVCDDADSARIRAFDYDGNETLSINVSADEQS 308
>SB_38273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 292 GSTMVFDNFPSSDTRYLYDRWIIKNKIFLQSVHK 191
G+T VFD+ P + L +I +N IF + K
Sbjct: 17 GTTCVFDHNPKDASLVLQQHFITRNSIFRSRLRK 50
>SB_22206| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-38)
Length = 362
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 20 NVMKMANVINRNVCVYRLKENFVFACVAMTKV 115
N+ K+AN IN+ + V+ + V C+A K+
Sbjct: 169 NIKKLANQINQGLLVFSITAISVIICMAYCKM 200
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +1
Query: 1 VRCDDC-KCDENGKCDKPECLCIPTEGK-LCIC 93
V C+D +CD CDK CI T G C C
Sbjct: 470 VTCEDIDECDIAHHCDKLHATCINTPGSHTCRC 502
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
Frame = +1
Query: 1 VRCDDCKCDENGKCDKP-ECLCIPTEGKLCICLCSDDKGNIKVC----DDCLC 144
++CD C KCD+ C C C +C+ C D C C
Sbjct: 370 LKCDCLSCTRAAKCDRELTCTCNKKWEGSCNAICTRTSNATSSCVTLGDQCHC 422
>SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)
Length = 635
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 1 VRCDD-CKCDENGKCDKPECLCIPTEG 78
V C++ C+C N CD + +C T G
Sbjct: 137 VNCNNTCECQNNSTCDSVQGICNCTSG 163
>SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 512
Score = 26.2 bits (55), Expect = 9.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 142 CIPTQSKELNCDKSGCICVPTEEK 213
C S+ + C K CI VP E+K
Sbjct: 370 CPGLNSESIECPKENCIDVPKEDK 393
>SB_40035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +1
Query: 34 GKCDKPECLCIPTEGKL-CICLCSDDKGNIKVCDDCLCI 147
GK + + EG L CIC DD + +C + CI
Sbjct: 311 GKWYTDRKVTVQGEGDLYCICSVKDDDSLVLICSNLSCI 349
>SB_50113| Best HMM Match : NHL (HMM E-Value=2.3e-07)
Length = 495
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 97 CSDDKGNIKVCDDCLCIPTQSKELNCDKSGCICVPTEEKS 216
C D+ GNI VCDD + + + +++ I V +E+S
Sbjct: 5 CLDNNGNIVVCDDADSARIHAFDYDGNETLSINVSADEQS 44
>SB_39250| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 468
Score = 26.2 bits (55), Expect = 9.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 142 CIPTQSKELNCDKSGCICVPTEEK 213
C S+ + C K CI VP E+K
Sbjct: 326 CPGLNSESIECPKENCIDVPKEDK 349
>SB_29891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 26.2 bits (55), Expect = 9.0
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 7 CDDCKCDENGKCDKPECLC 63
CD C+ G C EC+C
Sbjct: 335 CDPLDCNGRGTCQMGECVC 353
>SB_20407| Best HMM Match : ResIII (HMM E-Value=0.36)
Length = 1175
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 91 CLCSDDKGNIKVCDDCLCIPTQSKELNCDKSGCICVPTEEK 213
CLC D +++C DC S+ L+ K +C P ++
Sbjct: 869 CLCEDRGKRLRLCRDCGSAAPSSR-LHDIKGRILCQPDSQQ 908
>SB_11766| Best HMM Match : Reprolysin (HMM E-Value=1.6e-08)
Length = 469
Score = 26.2 bits (55), Expect = 9.0
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 4 RCDDCKCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVCDDCLCI 147
RCD C + KC P + +P +G C GN K C +C+
Sbjct: 389 RCDSLLCIKGSKCINPRNI-LPVDGTPC--------GNRKWCISGICV 427
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,532,387
Number of Sequences: 59808
Number of extensions: 258978
Number of successful extensions: 959
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 644574580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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