Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00141
(381 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 33 0.049
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 33 0.049
At3g51340.1 68416.m05620 aspartyl protease family protein contai... 32 0.11
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 32 0.11
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 32 0.11
At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nea... 29 0.79
At3g16160.1 68416.m02040 tesmin/TSO1-like CXC domain-containing ... 28 2.4
At5g52170.1 68418.m06476 homeobox-leucine zipper family protein ... 27 5.6
At5g20250.1 68418.m02410 raffinose synthase family protein / see... 27 5.6
At3g51350.1 68416.m05622 aspartyl protease family protein contai... 27 5.6
At1g07600.1 68414.m00813 metallothionein-like protein 1A (MT-1A)... 27 5.6
At2g01630.1 68415.m00089 glycosyl hydrolase family 17 protein / ... 26 9.7
At2g01620.1 68415.m00088 expressed protein 26 9.7
At1g61850.1 68414.m06979 patatin family protein similar to membr... 26 9.7
At1g14740.1 68414.m01762 expressed protein 26 9.7
At1g14440.2 68414.m01713 zinc finger homeobox family protein / Z... 26 9.7
At1g14440.1 68414.m01712 zinc finger homeobox family protein / Z... 26 9.7
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 33.5 bits (73), Expect = 0.049
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 RCDDC-KCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVCDDCL 141
+C+D +C E C PEC C T G C CS D I+ D C+
Sbjct: 514 KCEDINECKEKKACQCPECSCKNTWGSY-ECSCSGDLLYIRDHDTCI 559
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 33.5 bits (73), Expect = 0.049
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 RCDDC-KCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVCDDCL 141
+C+D +C E C PEC C T G C CS D I+ D C+
Sbjct: 514 KCEDINECKEKKACQCPECSCKNTWGSY-ECSCSGDLLYIRDHDTCI 559
>At3g51340.1 68416.m05620 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 518
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 1 VRCDDCKCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVCDDCLCIPTQSKEL 168
+RC D +C +GKC PE +C P + I L S+ + D L + T+ ++L
Sbjct: 154 IRCSDKRCFGSGKCSSPESIC-PYQ----IALSSNTVTTGTLLQDVLHLVTEDEDL 204
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 32.3 bits (70), Expect = 0.11
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 RCDDC-KCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVCDDCL 141
+C+D +C E C PEC C T G C CS D ++ D C+
Sbjct: 514 KCEDINECKEKKACQCPECSCKNTWGSY-ECSCSGDLLYMRDHDTCI 559
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 32.3 bits (70), Expect = 0.11
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 4 RCDDC-KCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVCDDCL 141
+C+D +C E C PEC C T G C CS D ++ D C+
Sbjct: 514 KCEDINECKEKKACQCPECSCKNTWGSY-ECSCSGDLLYMRDHDTCI 559
>At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
(GP:1737218) [Arabidopsis thaliana]
Length = 623
Score = 29.5 bits (63), Expect = 0.79
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 7 CDDC-KCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVCDDCL 141
C+D +C E C PEC C T G C CS+ ++ D C+
Sbjct: 510 CEDVDECKEKTVCQCPECKCKNTWGSY-ECSCSNGLLYMREHDTCI 554
>At3g16160.1 68416.m02040 tesmin/TSO1-like CXC domain-containing
protein low similarity to cysteine-rich polycomb-like
protein (cpp1) [Glycine max] GI:4218187; contains Pfam
profile PF03638: Tesmin/TSO1-like CXC domain
Length = 360
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +1
Query: 19 KCDENGKCDKPECLCIPTEGKLCICLCSDDKGNIKVCDDCLCIPTQSKELNCD 177
K DE G + C + K C+ L D + VC DC C+ + CD
Sbjct: 55 KTDEEGITSRKHKGCRCKQSK-CLKLYCDCFASGVVCTDCDCVDCHNNSEKCD 106
>At5g52170.1 68418.m06476 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
Anthocyaninless2 (ANL2) (GP:5702094) [Arabidopsis
thaliana]; contains Pfam PF00046: Homeobox domain and
Pfam PF01852: START domain
Length = 682
Score = 26.6 bits (56), Expect = 5.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 110 LSSLHRQIQSFPSV-GIHRHSGLSHLPFSSHLQSSQR 3
L++L RQ +SF + H+GLSH S L+ +QR
Sbjct: 417 LATLQRQCESFTMLLSSEDHTGLSHAGTKSILKLAQR 453
>At5g20250.1 68418.m02410 raffinose synthase family protein / seed
imbibition protein, putative (din10) similar to seed
imbibition protein GB:AAA32975 GI:167100 from [Hordeum
vulgare]; contains nonconsensus AT donor splice site at
intron 1; contains Pfam profile PF05691: Raffinose
synthase or seed imbibition protein Sip1; identical to
cDNA seed imbibition protein (din10) partial cds
GI:10834551
Length = 844
Score = 26.6 bits (56), Expect = 5.6
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -2
Query: 137 QSSHTFILPLSSLHRQIQSFPSVGIHRHSGLSHLPFSSHLQSSQR 3
QS + I + +H I S HR S S LPF SH+ SSQ+
Sbjct: 4 QSCYNGIHRIKRVHPLIHSLT---FHRFSS-SSLPFKSHIPSSQQ 44
>At3g51350.1 68416.m05622 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 528
Score = 26.6 bits (56), Expect = 5.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 1 VRCDDCKCDENGKCDKPECLC 63
+RC D +C + KC P +C
Sbjct: 165 IRCSDKRCFGSKKCSSPSSIC 185
>At1g07600.1 68414.m00813 metallothionein-like protein 1A (MT-1A)
(MT-Q) (MT-2) identical to Metallothionein-like protein
1A (MT-1A) (MT-Q) (MT-2) SP:P43392 from (Arabidopsis
thaliana)
Length = 45
Score = 26.6 bits (56), Expect = 5.6
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +1
Query: 76 GKLCIC--LCSDDKGNIKVCDDCLCIPTQSKELNCD 177
G C C CS +K K CD+C C S NC+
Sbjct: 9 GSSCKCGDSCSCEKNYNKECDNCSCGSNCSCGSNCN 44
>At2g01630.1 68415.m00089 glycosyl hydrolase family 17 protein /
beta-1,3-glucanase, putative similar to
beta-1,3-glucanase GI:15150341 from [Camellia sinensis]
Length = 501
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 301 TDHGSTMVFDNFPSSDTRY--LYDRWIIKNKIFLQS 200
T H ST++ D+FP S + +D I+ FLQS
Sbjct: 152 TPHSSTIILDSFPPSQAFFNKTWDPVIVPLLKFLQS 187
>At2g01620.1 68415.m00088 expressed protein
Length = 292
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 7 CDDCKCDENGKCDKPECLCIPTEGKLCICLC-SDDKGNIKVC--DDCLCI 147
C C++ + + LCIP + +CL SD + C DD LC+
Sbjct: 185 CSRESCNQKQRKCRGCWLCIPRCAECAVCLVGSDTESQEAACGNDDVLCL 234
>At1g61850.1 68414.m06979 patatin family protein similar to
membrane-associated calcium-independent phospholipase A2
gamma; IPLA2 gamma [Homo sapiens] GI:8453174; contains
Patatin domain PF01734, PF00514:
Armadillo/beta-catenin-like repeat
Length = 1265
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 116 LPLSSLHRQIQSFPSVGI 63
LPL +H ++Q+ P VGI
Sbjct: 972 LPLRQMHEKLQNLPQVGI 989
>At1g14740.1 68414.m01762 expressed protein
Length = 733
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 85 CIC-LCSDDKGNIKVCDDCLCIPTQSKELNCDKSGC-IC 195
C C +CS++KG C +C+ S C GC +C
Sbjct: 422 CECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVC 460
>At1g14440.2 68414.m01713 zinc finger homeobox family protein /
ZF-HD homeobox family protein
Length = 312
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 221 LNYPAIIKVPGIR*WEIVENHSATM 295
+ Y AIIK P I+ E ++NH+A M
Sbjct: 77 VGYNAIIKKPMIKYKECLKNHAAAM 101
>At1g14440.1 68414.m01712 zinc finger homeobox family protein /
ZF-HD homeobox family protein
Length = 312
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 221 LNYPAIIKVPGIR*WEIVENHSATM 295
+ Y AIIK P I+ E ++NH+A M
Sbjct: 77 VGYNAIIKKPMIKYKECLKNHAAAM 101
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,975,119
Number of Sequences: 28952
Number of extensions: 166884
Number of successful extensions: 493
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 527724392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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