Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00140
(568 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113478-1|AAM29483.1| 106|Drosophila melanogaster RE44302p pro... 100 2e-21
X83271-1|CAA58244.1| 106|Drosophila melanogaster dTFIIA-S protein. 99 2e-21
AE014297-3399|AAF56199.1| 106|Drosophila melanogaster CG5163-PA... 99 2e-21
AE014298-137|AAF45575.1| 107|Drosophila melanogaster CG11639-PA... 62 5e-10
BT029686-1|ABL75743.1| 394|Drosophila melanogaster IP17383p pro... 30 2.5
AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U prot... 30 2.5
AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC... 30 2.5
AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB... 30 2.5
BT012479-1|AAS93750.1| 465|Drosophila melanogaster RE13884p pro... 29 4.4
AY094863-1|AAM11216.1| 203|Drosophila melanogaster RE24638p pro... 29 4.4
AY069709-1|AAL39854.1| 258|Drosophila melanogaster LD48048p pro... 29 4.4
AE014297-3750|AAF56431.1| 203|Drosophila melanogaster CG11857-P... 29 4.4
AE014134-1344|AAN10646.1| 258|Drosophila melanogaster CG14536-P... 29 4.4
AE014134-1343|AAF52560.1| 465|Drosophila melanogaster CG14536-P... 29 4.4
AY113300-1|AAM29305.1| 297|Drosophila melanogaster AT26020p pro... 28 7.7
AY052140-1|AAK93564.1| 592|Drosophila melanogaster SD09786p pro... 28 7.7
AE013599-2425|AAF57898.2| 592|Drosophila melanogaster CG30456-P... 28 7.7
>AY113478-1|AAM29483.1| 106|Drosophila melanogaster RE44302p
protein.
Length = 106
Score = 100 bits (239), Expect = 2e-21
Identities = 49/75 (65%), Positives = 58/75 (77%), Gaps = 3/75 (4%)
Frame = +3
Query: 189 TSSKSFAAIRQIYKSSSV---Q*SKSRLTFKAGKLNTYRFCDNVWTFMLNDVEFREVQEL 359
T +F + Q+ KS + Q K+R+TFKAGKLNTYRFCDNVWT MLNDVEFREV E+
Sbjct: 29 TPGLAFKVLLQLDKSINNALNQRVKARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEI 88
Query: 360 AKVEKVKIVACDGKN 404
KV+KVKIVACDGK+
Sbjct: 89 VKVDKVKIVACDGKS 103
Score = 94.3 bits (224), Expect = 1e-19
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = +1
Query: 97 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRV 252
MSYQLYRNTT+GNTLQESLDELIQYGQITP LA KVLLQ DKSIN AL+ RV
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQLDKSINNALNQRV 52
>X83271-1|CAA58244.1| 106|Drosophila melanogaster dTFIIA-S protein.
Length = 106
Score = 99 bits (238), Expect = 2e-21
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = +3
Query: 252 KSRLTFKAGKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 404
K+R+TFKAGKLNTYRFCDNVWT MLNDVEFREV E+ KV+KVKIVACDGK+
Sbjct: 53 KARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKS 103
Score = 96.7 bits (230), Expect = 2e-20
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +1
Query: 97 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRV 252
MSYQLYRNTT+GNTLQESLDELIQYGQITP LA KVLLQFDKSIN AL+ RV
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRV 52
>AE014297-3399|AAF56199.1| 106|Drosophila melanogaster CG5163-PA
protein.
Length = 106
Score = 99 bits (238), Expect = 2e-21
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = +3
Query: 252 KSRLTFKAGKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 404
K+R+TFKAGKLNTYRFCDNVWT MLNDVEFREV E+ KV+KVKIVACDGK+
Sbjct: 53 KARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKS 103
Score = 96.7 bits (230), Expect = 2e-20
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +1
Query: 97 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRV 252
MSYQLYRNTT+GNTLQESLDELIQYGQITP LA KVLLQFDKSIN AL+ RV
Sbjct: 1 MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRV 52
>AE014298-137|AAF45575.1| 107|Drosophila melanogaster CG11639-PA
protein.
Length = 107
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +3
Query: 255 SRLTFKAGKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDG 398
S ++F A +L T+R CDNVWT +L D EFRE Q KV+ VKIVAC G
Sbjct: 54 SNMSFTAERLETFRCCDNVWTLILKDAEFREDQHSLKVDVVKIVACLG 101
Score = 58.8 bits (136), Expect = 5e-09
Identities = 27/50 (54%), Positives = 39/50 (78%)
Frame = +1
Query: 97 MSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSN 246
M+YQ YR TT+G TLQ++LDE+++ G IT +A VLL++DKSI+ AL +
Sbjct: 1 MNYQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKD 50
>BT029686-1|ABL75743.1| 394|Drosophila melanogaster IP17383p
protein.
Length = 394
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 178 FVHIGSARLGFLEVYY--Q*WYFCIIDMTSLFKLHC 77
F H G R F E YY + + C++D+ +LFK++C
Sbjct: 279 FKHDGRPRDVFYERYYYIELVFTCLLDLETLFKIYC 314
>AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U protein
protein.
Length = 1910
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 178 FVHIGSARLGFLEVYY--Q*WYFCIIDMTSLFKLHC 77
F H G R F E YY + + C++D+ +LFK++C
Sbjct: 405 FKHDGRPRDVFYERYYYIELVFTCLLDLETLFKIYC 440
>AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC,
isoform C protein.
Length = 2148
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 178 FVHIGSARLGFLEVYY--Q*WYFCIIDMTSLFKLHC 77
F H G R F E YY + + C++D+ +LFK++C
Sbjct: 643 FKHDGRPRDVFYERYYYIELVFTCLLDLETLFKIYC 678
>AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB,
isoform B protein.
Length = 2196
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 178 FVHIGSARLGFLEVYY--Q*WYFCIIDMTSLFKLHC 77
F H G R F E YY + + C++D+ +LFK++C
Sbjct: 691 FKHDGRPRDVFYERYYYIELVFTCLLDLETLFKIYC 726
>BT012479-1|AAS93750.1| 465|Drosophila melanogaster RE13884p
protein.
Length = 465
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 30 FFVYTKYEI---LLFF--I*LQCNLNSDVISIIQKYHYW*YTSRKPRRADPIWTNNTSTS 194
FF +T+ I +L+F L+C L + I YH R+ R + I NN +
Sbjct: 300 FFSFTRLAIFVTVLYFNSSALRCLLVVLIAGAIYLYHIGVLRRRRERNNNNINRNNNAGD 359
Query: 195 SKSFAAIRQIYK 230
+ +FAA++QI +
Sbjct: 360 AAAFAAVQQIQR 371
>AY094863-1|AAM11216.1| 203|Drosophila melanogaster RE24638p
protein.
Length = 203
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +3
Query: 9 LISLICYFFVYTKYEI-----LLFFI*LQCNLNSDVISIIQKYHYW*YTSRKPR 155
LI LIC FF + + +++FI L C I + KY Y +T KPR
Sbjct: 130 LIGLICTFFDFFNVPVFWPILVMYFITLFCITMKRQIKHMIKYKYLPFTRNKPR 183
>AY069709-1|AAL39854.1| 258|Drosophila melanogaster LD48048p
protein.
Length = 258
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 30 FFVYTKYEI---LLFF--I*LQCNLNSDVISIIQKYHYW*YTSRKPRRADPIWTNNTSTS 194
FF +T+ I +L+F L+C L + I YH R+ R + I NN +
Sbjct: 93 FFSFTRLAIFVTVLYFNSSALRCLLVVLIAGAIYLYHIGVLRRRRERNNNNINRNNNAGD 152
Query: 195 SKSFAAIRQIYK 230
+ +FAA++QI +
Sbjct: 153 AAAFAAVQQIQR 164
>AE014297-3750|AAF56431.1| 203|Drosophila melanogaster CG11857-PA
protein.
Length = 203
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +3
Query: 9 LISLICYFFVYTKYEI-----LLFFI*LQCNLNSDVISIIQKYHYW*YTSRKPR 155
LI LIC FF + + +++FI L C I + KY Y +T KPR
Sbjct: 130 LIGLICTFFDFFNVPVFWPILVMYFITLFCITMKRQIKHMIKYKYLPFTRNKPR 183
>AE014134-1344|AAN10646.1| 258|Drosophila melanogaster CG14536-PB,
isoform B protein.
Length = 258
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 30 FFVYTKYEI---LLFF--I*LQCNLNSDVISIIQKYHYW*YTSRKPRRADPIWTNNTSTS 194
FF +T+ I +L+F L+C L + I YH R+ R + I NN +
Sbjct: 93 FFSFTRLAIFVTVLYFNSSALRCLLVVLIAGAIYLYHIGVLRRRRERNNNNINRNNNAGD 152
Query: 195 SKSFAAIRQIYK 230
+ +FAA++QI +
Sbjct: 153 AAAFAAVQQIQR 164
>AE014134-1343|AAF52560.1| 465|Drosophila melanogaster CG14536-PA,
isoform A protein.
Length = 465
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 30 FFVYTKYEI---LLFF--I*LQCNLNSDVISIIQKYHYW*YTSRKPRRADPIWTNNTSTS 194
FF +T+ I +L+F L+C L + I YH R+ R + I NN +
Sbjct: 300 FFSFTRLAIFVTVLYFNSSALRCLLVVLIAGAIYLYHIGVLRRRRERNNNNINRNNNAGD 359
Query: 195 SKSFAAIRQIYK 230
+ +FAA++QI +
Sbjct: 360 AAAFAAVQQIQR 371
>AY113300-1|AAM29305.1| 297|Drosophila melanogaster AT26020p
protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 419 SAVVNIFTITCYYFNFFHLGQFLYFSKFNIIQHK 318
S ++N + C+ FN ++ G+F ++F ++ HK
Sbjct: 119 SEIINDI-VDCHEFNVYYQGKFRKVNEFQVLDHK 151
>AY052140-1|AAK93564.1| 592|Drosophila melanogaster SD09786p
protein.
Length = 592
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 419 SAVVNIFTITCYYFNFFHLGQFLYFSKFNIIQHK 318
S ++N + C+ FN ++ G+F ++F ++ HK
Sbjct: 414 SEIINDI-VDCHEFNVYYQGKFRKVNEFQVLDHK 446
>AE013599-2425|AAF57898.2| 592|Drosophila melanogaster CG30456-PA
protein.
Length = 592
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 419 SAVVNIFTITCYYFNFFHLGQFLYFSKFNIIQHK 318
S ++N + C+ FN ++ G+F ++F ++ HK
Sbjct: 414 SEIINDI-VDCHEFNVYYQGKFRKVNEFQVLDHK 446
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,081,490
Number of Sequences: 53049
Number of extensions: 353467
Number of successful extensions: 914
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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