Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00139
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   5.8  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 598 FDMVIEIGVPLCFHEKTNNRNESDIK 675
           F + + IGV +  + K+ +RNE  IK
Sbjct: 39  FFLALSIGVVVSIYSKSFHRNEIHIK 64


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 383 ITNLESLLADISVRYIQLKESDFE 454
           + +LES  AD++  ++Q ++  FE
Sbjct: 328 VKSLESRYADLNENFLQCQDEKFE 351


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 339 FDSGALLFLLKPVFSSCRI 283
           F +GA+  +LKP+++  RI
Sbjct: 55  FGNGAIYEVLKPIYALMRI 73


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 36  LYFIKFITQHKSK 74
           +YF  FIT+H+SK
Sbjct: 228 MYFDIFITEHESK 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,180
Number of Sequences: 336
Number of extensions: 4199
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)